RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 NLRP1Q9C000 1473 aa20.83■□□□□ 0.93
CHRD-208ENST00000460627 IL27Q8NEV9 243 aa20.83■□□□□ 0.93
CHRD-208ENST00000460627 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
CHRD-208ENST00000460627 ERVK-7P63135 1459 aa20.83■□□□□ 0.92
CHRD-208ENST00000460627 CCDC196A0A1B0GTZ2 297 aa20.83■□□□□ 0.92
CHRD-208ENST00000460627 MINDY4BA8MYZ0 360 aa20.83■□□□□ 0.92
CHRD-208ENST00000460627 C6orf229H3BNL8 230 aa20.83■□□□□ 0.92
CHRD-208ENST00000460627 GOLIM4O00461 696 aa20.83■□□□□ 0.92
CHRD-208ENST00000460627 IL15P40933 162 aaPredicted RBP20.83■□□□□ 0.92
CHRD-208ENST00000460627 POLR3DP05423 398 aaPredicted RBP20.82■□□□□ 0.92
CHRD-208ENST00000460627 ZNF213O14771 459 aa20.82■□□□□ 0.92
CHRD-208ENST00000460627 KRT24Q2M2I5 525 aa20.82■□□□□ 0.92
CHRD-208ENST00000460627 ME1P48163 572 aa20.82■□□□□ 0.92
CHRD-208ENST00000460627 CEBPZQ03701 1054 aaKnown RBP20.82■□□□□ 0.92
CHRD-208ENST00000460627 NLRP3Q96P20 1036 aa20.82■□□□□ 0.92
CHRD-208ENST00000460627 TBC1D9Q6ZT07 1266 aa20.82■□□□□ 0.92
CHRD-208ENST00000460627 METP08581 1390 aa20.81■□□□□ 0.92
CHRD-208ENST00000460627 CHL1O00533 1208 aa20.81■□□□□ 0.92
CHRD-208ENST00000460627 ST5P78524 1137 aa20.81■□□□□ 0.92
CHRD-208ENST00000460627 SKAP1Q86WV1 359 aa20.81■□□□□ 0.92
CHRD-208ENST00000460627 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
CHRD-208ENST00000460627 MKNK2Q9HBH9 465 aa20.81■□□□□ 0.92
CHRD-208ENST00000460627 DZIP3Q86Y13 1208 aaKnown RBP20.81■□□□□ 0.92
CHRD-208ENST00000460627 ZNF790Q6PG37 636 aa20.8■□□□□ 0.92
CHRD-208ENST00000460627 KAT6BQ8WYB5 2073 aa20.8■□□□□ 0.92
CHRD-208ENST00000460627 IQCA1Q86XH1 822 aa20.8■□□□□ 0.92
CHRD-208ENST00000460627 ANKRD18AQ8IVF6 992 aa20.8■□□□□ 0.92
CHRD-208ENST00000460627 KDM6BO15054 1643 aa20.8■□□□□ 0.92
CHRD-208ENST00000460627 CCAR1Q8IX12 1150 aaKnown RBP20.8■□□□□ 0.92
CHRD-208ENST00000460627 NIP7Q9Y221 180 aaKnown RBP eCLIP20.8■□□□□ 0.92
CHRD-208ENST00000460627 UGGT1Q9NYU2 1555 aa20.79■□□□□ 0.92
CHRD-208ENST00000460627 NASPP49321 788 aaPredicted RBP20.79■□□□□ 0.92
CHRD-208ENST00000460627 ATP2B3Q16720 1220 aa20.79■□□□□ 0.92
CHRD-208ENST00000460627 SPTY2D1Q68D10 685 aaPredicted RBP20.79■□□□□ 0.92
CHRD-208ENST00000460627 ZFYP08048 801 aaPredicted RBP20.79■□□□□ 0.92
CHRD-208ENST00000460627 SNRKQ9NRH2 765 aa20.79■□□□□ 0.92
CHRD-208ENST00000460627 PDE1AP54750 535 aa20.78■□□□□ 0.92
CHRD-208ENST00000460627 ARHGAP31Q2M1Z3 1444 aa20.78■□□□□ 0.92
CHRD-208ENST00000460627 PIP4K2AP48426 406 aaPredicted RBP20.78■□□□□ 0.92
CHRD-208ENST00000460627 UTP14AQ9BVJ6 771 aaKnown RBP20.78■□□□□ 0.92
CHRD-208ENST00000460627 CRACR2BQ8N4Y2 399 aaPredicted RBP20.78■□□□□ 0.92
CHRD-208ENST00000460627 NYXQ9GZU5 481 aa20.78■□□□□ 0.92
CHRD-208ENST00000460627 ZBTB40Q9NUA8 1239 aa20.78■□□□□ 0.92
CHRD-208ENST00000460627 FAM13BQ9NYF5 915 aa20.78■□□□□ 0.92
CHRD-208ENST00000460627 LIMCH1Q9UPQ0 1083 aa20.78■□□□□ 0.92
CHRD-208ENST00000460627 RNF214Q8ND24 703 aa20.77■□□□□ 0.92
CHRD-208ENST00000460627 DCTPP1Q9H773 170 aa20.77■□□□□ 0.92
CHRD-208ENST00000460627 RTCBQ9Y3I0 505 aaKnown RBP20.77■□□□□ 0.92
CHRD-208ENST00000460627 NPHP4O75161 1426 aaPredicted RBP20.77■□□□□ 0.92
CHRD-208ENST00000460627 SPATA32Q96LK8 384 aa20.77■□□□□ 0.92
CHRD-208ENST00000460627 HMG20BQ9P0W2 317 aa20.77■□□□□ 0.92
CHRD-208ENST00000460627 TRIM35Q9UPQ4 493 aa20.77■□□□□ 0.92
CHRD-208ENST00000460627 RLBP1P12271 317 aa20.76■□□□□ 0.91
CHRD-208ENST00000460627 HMGN5P82970 282 aaKnown RBP20.76■□□□□ 0.91
CHRD-208ENST00000460627 CCDC83Q8IWF9 413 aa20.76■□□□□ 0.91
CHRD-208ENST00000460627 TSPY26PQ9H489 355 aa20.76■□□□□ 0.91
CHRD-208ENST00000460627 BAG3O95817 575 aa20.76■□□□□ 0.91
CHRD-208ENST00000460627 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
CHRD-208ENST00000460627 TPTE2Q6XPS3 522 aa20.76■□□□□ 0.91
CHRD-208ENST00000460627 CEP85Q6P2H3 762 aa20.75■□□□□ 0.91
CHRD-208ENST00000460627 ZNF444Q8N0Y2 327 aaPredicted RBP20.75■□□□□ 0.91
CHRD-208ENST00000460627 KDM5AP29375 1690 aaKnown RBP20.75■□□□□ 0.91
CHRD-208ENST00000460627 PRDM15P57071 1507 aaPredicted RBP20.75■□□□□ 0.91
CHRD-208ENST00000460627 TSPOAP1O95153 1857 aa20.75■□□□□ 0.91
CHRD-208ENST00000460627 DDX11Q96FC9 970 aa20.75■□□□□ 0.91
CHRD-208ENST00000460627 ABCC3O15438 1527 aa20.75■□□□□ 0.91
CHRD-208ENST00000460627 ADCY10Q96PN6 1610 aa20.75■□□□□ 0.91
CHRD-208ENST00000460627 TMEM94Q12767 1356 aa20.75■□□□□ 0.91
CHRD-208ENST00000460627 MCM4P33991 863 aa20.75■□□□□ 0.91
CHRD-208ENST00000460627 CCDC192P0DO97 292 aa20.74■□□□□ 0.91
CHRD-208ENST00000460627 SDSP20132 328 aa20.74■□□□□ 0.91
CHRD-208ENST00000460627 CWF19L2Q2TBE0 894 aaKnown RBP20.74■□□□□ 0.91
CHRD-208ENST00000460627 SLC52A2Q9HAB3 445 aa20.73■□□□□ 0.91
CHRD-208ENST00000460627 RANBP6O60518 1105 aaKnown RBP20.73■□□□□ 0.91
CHRD-208ENST00000460627 SMC5Q8IY18 1101 aa20.73■□□□□ 0.91
CHRD-208ENST00000460627 TNMDQ9H2S6 317 aa20.73■□□□□ 0.91
CHRD-208ENST00000460627 KRT18P05783 430 aaKnown RBP20.73■□□□□ 0.91
CHRD-208ENST00000460627 TSHZ3Q63HK5 1081 aa20.73■□□□□ 0.91
CHRD-208ENST00000460627 HOMER1Q86YM7 354 aa20.73■□□□□ 0.91
CHRD-208ENST00000460627 PHAXQ9H814 394 aaKnown RBP20.73■□□□□ 0.91
CHRD-208ENST00000460627 TRIM5Q9C035 493 aa20.72■□□□□ 0.91
CHRD-208ENST00000460627 FILIP1LQ4L180 1135 aa20.72■□□□□ 0.91
CHRD-208ENST00000460627 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
CHRD-208ENST00000460627 R3HCC1Q9Y3T6 440 aaKnown RBP20.72■□□□□ 0.91
CHRD-208ENST00000460627 SHROOM2Q13796 1616 aa20.72■□□□□ 0.91
CHRD-208ENST00000460627 IFIT3O14879 490 aaKnown RBP20.72■□□□□ 0.91
CHRD-208ENST00000460627 EPS15P42566 896 aa20.72■□□□□ 0.91
CHRD-208ENST00000460627 TTC41PQ6P2S7 1318 aa20.72■□□□□ 0.91
CHRD-208ENST00000460627 CCDC70Q6NSX1 233 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 AATKQ6ZMQ8 1374 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 FAM135BQ49AJ0 1406 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 CDC42BPAQ5VT25 1732 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 PLBD2Q8NHP8 589 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 DACH1Q9UI36 760 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 SLC12A7Q9Y666 1083 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 IRS4O14654 1257 aaPredicted RBP20.71■□□□□ 0.91
CHRD-208ENST00000460627 ZNF622Q969S3 477 aaKnown RBP eCLIP20.71■□□□□ 0.91
CHRD-208ENST00000460627 LGR6Q9HBX8 967 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 CEP131Q9UPN4 1083 aa20.71■□□□□ 0.91
CHRD-208ENST00000460627 TET3O43151 1660 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms