RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
UPK1B-202ENST00000460625 CICQ96RK0 1608 aaPredicted RBP13.67□□□□□ -0.22
UPK1B-202ENST00000460625 GNAI2P04899 355 aa13.66□□□□□ -0.22
UPK1B-202ENST00000460625 GNAI3P08754 354 aa13.66□□□□□ -0.22
UPK1B-202ENST00000460625 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
UPK1B-202ENST00000460625 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
UPK1B-202ENST00000460625 ZBTB3Q9H5J0 574 aa13.66□□□□□ -0.22
UPK1B-202ENST00000460625 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
UPK1B-202ENST00000460625 COL5A3P25940 1745 aaPredicted RBP13.66□□□□□ -0.22
UPK1B-202ENST00000460625 ALDH1L1O75891 902 aa13.66□□□□□ -0.22
UPK1B-202ENST00000460625 INTS5Q6P9B9 1019 aaKnown RBP13.66□□□□□ -0.22
UPK1B-202ENST00000460625 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
UPK1B-202ENST00000460625 AFDNP55196 1824 aaKnown RBP13.66□□□□□ -0.22
UPK1B-202ENST00000460625 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
UPK1B-202ENST00000460625 ATP5J2-PTCD1G3V325 749 aa13.65□□□□□ -0.22
UPK1B-202ENST00000460625 UBTFL1P0CB47 393 aaPredicted RBP13.65□□□□□ -0.22
UPK1B-202ENST00000460625 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
UPK1B-202ENST00000460625 SMC5Q8IY18 1101 aa13.65□□□□□ -0.22
UPK1B-202ENST00000460625 CRKLP46109 303 aaKnown RBP13.64□□□□□ -0.23
UPK1B-202ENST00000460625 PDZRN3Q9UPQ7 1066 aa13.64□□□□□ -0.23
UPK1B-202ENST00000460625 ZNF831Q5JPB2 1677 aa13.64□□□□□ -0.23
UPK1B-202ENST00000460625 RREB1Q92766 1687 aa13.64□□□□□ -0.23
UPK1B-202ENST00000460625 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
UPK1B-202ENST00000460625 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
UPK1B-202ENST00000460625 C9orf78Q9NZ63 289 aaPredicted RBP13.64□□□□□ -0.23
UPK1B-202ENST00000460625 GRM8O00222 908 aa13.63□□□□□ -0.23
UPK1B-202ENST00000460625 GCKRQ14397 625 aa13.63□□□□□ -0.23
UPK1B-202ENST00000460625 POTEAQ6S8J7 498 aa13.63□□□□□ -0.23
UPK1B-202ENST00000460625 CCDC87Q9NVE4 849 aa13.63□□□□□ -0.23
UPK1B-202ENST00000460625 LY75O60449 1722 aa13.63□□□□□ -0.23
UPK1B-202ENST00000460625 PNMA6EA0A0J9YXQ4 647 aa13.62□□□□□ -0.23
UPK1B-202ENST00000460625 RXRBP28702 533 aa13.62□□□□□ -0.23
UPK1B-202ENST00000460625 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
UPK1B-202ENST00000460625 RGS3P49796 1198 aa13.62□□□□□ -0.23
UPK1B-202ENST00000460625 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
UPK1B-202ENST00000460625 ARXQ96QS3 562 aa13.62□□□□□ -0.23
UPK1B-202ENST00000460625 BCL11BQ9C0K0 894 aaPredicted RBP13.62□□□□□ -0.23
UPK1B-202ENST00000460625 UTYO14607 1347 aa13.62□□□□□ -0.23
UPK1B-202ENST00000460625 EIF5P55010 431 aaKnown RBP13.62□□□□□ -0.23
UPK1B-202ENST00000460625 HLFQ16534 295 aa13.62□□□□□ -0.23
UPK1B-202ENST00000460625 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
UPK1B-202ENST00000460625 KAZALD1Q96I82 304 aa13.62□□□□□ -0.23
UPK1B-202ENST00000460625 ATP8B2P98198 1209 aa13.61□□□□□ -0.23
UPK1B-202ENST00000460625 KIF6Q6ZMV9 814 aa13.61□□□□□ -0.23
UPK1B-202ENST00000460625 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
UPK1B-202ENST00000460625 TBC1D2BQ9UPU7 963 aa13.61□□□□□ -0.23
UPK1B-202ENST00000460625 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
UPK1B-202ENST00000460625 TRIM37O94972 964 aa13.6□□□□□ -0.23
UPK1B-202ENST00000460625 GCC1Q96CN9 775 aa13.6□□□□□ -0.23
UPK1B-202ENST00000460625 SUCLG2Q96I99 432 aa13.6□□□□□ -0.23
UPK1B-202ENST00000460625 IBTKQ9P2D0 1353 aaPredicted RBP13.6□□□□□ -0.23
UPK1B-202ENST00000460625 PDE4AP27815 886 aa13.6□□□□□ -0.23
UPK1B-202ENST00000460625 NUCB1Q02818 461 aa13.6□□□□□ -0.23
UPK1B-202ENST00000460625 PPP1R42Q7Z4L9 355 aa13.6□□□□□ -0.23
UPK1B-202ENST00000460625 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
UPK1B-202ENST00000460625 NUP98P52948 1817 aa13.6□□□□□ -0.23
UPK1B-202ENST00000460625 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
UPK1B-202ENST00000460625 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
UPK1B-202ENST00000460625 SMIM5Q71RC9 77 aa13.59□□□□□ -0.23
UPK1B-202ENST00000460625 DZIP3Q86Y13 1208 aaKnown RBP13.59□□□□□ -0.23
UPK1B-202ENST00000460625 ISCA1Q9BUE6 129 aa13.59□□□□□ -0.23
UPK1B-202ENST00000460625 A0A087WZG4 1122 aa13.58□□□□□ -0.23
UPK1B-202ENST00000460625 CASP7P55210 303 aa13.58□□□□□ -0.23
UPK1B-202ENST00000460625 EPHA10Q5JZY3 1008 aa13.58□□□□□ -0.23
UPK1B-202ENST00000460625 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.23
UPK1B-202ENST00000460625 LNPKQ9C0E8 428 aa13.58□□□□□ -0.23
UPK1B-202ENST00000460625 HMMRO75330 724 aa13.58□□□□□ -0.24
UPK1B-202ENST00000460625 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
UPK1B-202ENST00000460625 UBE3BQ7Z3V4 1068 aa13.58□□□□□ -0.24
UPK1B-202ENST00000460625 SSH3Q8TE77 659 aa13.58□□□□□ -0.24
UPK1B-202ENST00000460625 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.24
UPK1B-202ENST00000460625 LRRC4BQ9NT99 713 aa13.58□□□□□ -0.24
UPK1B-202ENST00000460625 CWC25Q9NXE8 425 aaPredicted RBP13.58□□□□□ -0.24
UPK1B-202ENST00000460625 CNTNAP4Q9C0A0 1308 aa13.58□□□□□ -0.24
UPK1B-202ENST00000460625 ANKRD36CQ5JPF3 1778 aa13.57□□□□□ -0.24
UPK1B-202ENST00000460625 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
UPK1B-202ENST00000460625 POLA2Q14181 598 aa13.57□□□□□ -0.24
UPK1B-202ENST00000460625 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
UPK1B-202ENST00000460625 CHD1LQ86WJ1 897 aa13.57□□□□□ -0.24
UPK1B-202ENST00000460625 EXOC6BQ9Y2D4 811 aa13.57□□□□□ -0.24
UPK1B-202ENST00000460625 COL15A1P39059 1388 aa13.57□□□□□ -0.24
UPK1B-202ENST00000460625 H7C1W4 665 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 APBB1O00213 710 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 GPTP24298 496 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 AMIGO3Q86WK7 504 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 ERVV-1B6SEH8 477 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 CAMTA2O94983 1202 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 MTX1Q13505 466 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
UPK1B-202ENST00000460625 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
UPK1B-202ENST00000460625 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
UPK1B-202ENST00000460625 TRIM28Q13263 835 aaKnown RBP13.55□□□□□ -0.24
UPK1B-202ENST00000460625 C4BP0C0L5 1744 aa13.55□□□□□ -0.24
UPK1B-202ENST00000460625 RC3H1Q5TC82 1133 aaKnown RBP13.54□□□□□ -0.24
UPK1B-202ENST00000460625 BCL11AQ9H165 835 aa13.54□□□□□ -0.24
UPK1B-202ENST00000460625 UBN2Q6ZU65 1347 aa13.54□□□□□ -0.24
UPK1B-202ENST00000460625 GNPATO15228 680 aa13.54□□□□□ -0.24
UPK1B-202ENST00000460625 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
UPK1B-202ENST00000460625 BCORQ6W2J9 1755 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms