RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.72
SLC6A1-203ENST00000460480 VEGFAP15692 232 aaPredicted RBP19.57■□□□□ 0.72
SLC6A1-203ENST00000460480 STYK1Q6J9G0 422 aa19.57■□□□□ 0.72
SLC6A1-203ENST00000460480 LTBP3Q9NS15 1303 aa19.56■□□□□ 0.72
SLC6A1-203ENST00000460480 HTRA3P83110 453 aa19.56■□□□□ 0.72
SLC6A1-203ENST00000460480 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
SLC6A1-203ENST00000460480 MIS18AQ9NYP9 233 aa19.56■□□□□ 0.72
SLC6A1-203ENST00000460480 CCDC88AQ3V6T2 1871 aa19.56■□□□□ 0.72
SLC6A1-203ENST00000460480 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
SLC6A1-203ENST00000460480 COL11A2P13942 1736 aaPredicted RBP19.55■□□□□ 0.72
SLC6A1-203ENST00000460480 CNKSR1Q969H4 720 aa19.55■□□□□ 0.72
SLC6A1-203ENST00000460480 BCORQ6W2J9 1755 aa19.55■□□□□ 0.72
SLC6A1-203ENST00000460480 FER1L6Q2WGJ9 1857 aa19.54■□□□□ 0.72
SLC6A1-203ENST00000460480 SLX4Q8IY92 1834 aa19.54■□□□□ 0.72
SLC6A1-203ENST00000460480 MASTLQ96GX5 879 aa19.54■□□□□ 0.72
SLC6A1-203ENST00000460480 ST5P78524 1137 aa19.53■□□□□ 0.72
SLC6A1-203ENST00000460480 PRPF40BQ6NWY9 871 aaKnown RBP19.53■□□□□ 0.72
SLC6A1-203ENST00000460480 JMYQ8N9B5 988 aa19.53■□□□□ 0.72
SLC6A1-203ENST00000460480 SMC1BQ8NDV3 1235 aa19.53■□□□□ 0.72
SLC6A1-203ENST00000460480 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
SLC6A1-203ENST00000460480 HLFQ16534 295 aa19.52■□□□□ 0.72
SLC6A1-203ENST00000460480 NBPF5PQ86XG9 351 aaPredicted RBP19.52■□□□□ 0.72
SLC6A1-203ENST00000460480 KLRG1Q96E93 195 aa19.52■□□□□ 0.72
SLC6A1-203ENST00000460480 WDR90Q96KV7 1748 aa19.51■□□□□ 0.71
SLC6A1-203ENST00000460480 EIF4A1P60842 406 aaKnown RBP19.51■□□□□ 0.71
SLC6A1-203ENST00000460480 ERFEQ4G0M1 354 aa19.51■□□□□ 0.71
SLC6A1-203ENST00000460480 TPTE2Q6XPS3 522 aa19.51■□□□□ 0.71
SLC6A1-203ENST00000460480 ZNF652Q9Y2D9 606 aa19.51■□□□□ 0.71
SLC6A1-203ENST00000460480 DPY19L2Q6NUT2 758 aa19.5■□□□□ 0.71
SLC6A1-203ENST00000460480 NIP7Q9Y221 180 aaKnown RBP eCLIP19.5■□□□□ 0.71
SLC6A1-203ENST00000460480 DICER1Q9UPY3 1922 aaKnown RBP19.5■□□□□ 0.71
SLC6A1-203ENST00000460480 NPR1P16066 1061 aa19.49■□□□□ 0.71
SLC6A1-203ENST00000460480 NFE2L2Q16236 605 aa19.49■□□□□ 0.71
SLC6A1-203ENST00000460480 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
SLC6A1-203ENST00000460480 TAOK3Q9H2K8 898 aa19.49■□□□□ 0.71
SLC6A1-203ENST00000460480 ERVV-1B6SEH8 477 aa19.48■□□□□ 0.71
SLC6A1-203ENST00000460480 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
SLC6A1-203ENST00000460480 THUMPD2Q9BTF0 503 aaKnown RBP19.48■□□□□ 0.71
SLC6A1-203ENST00000460480 TIAM2Q8IVF5 1701 aa19.48■□□□□ 0.71
SLC6A1-203ENST00000460480 NPHP1O15259 732 aa19.47■□□□□ 0.71
SLC6A1-203ENST00000460480 DLG5Q8TDM6 1919 aa19.47■□□□□ 0.71
SLC6A1-203ENST00000460480 DDNO94850 711 aaPredicted RBP19.46■□□□□ 0.71
SLC6A1-203ENST00000460480 ARFGEF2Q9Y6D5 1785 aa19.45■□□□□ 0.7
SLC6A1-203ENST00000460480 OLFM4Q6UX06 510 aa19.45■□□□□ 0.7
SLC6A1-203ENST00000460480 TTLL7Q6ZT98 887 aa19.45■□□□□ 0.7
SLC6A1-203ENST00000460480 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
SLC6A1-203ENST00000460480 CRY2Q49AN0 593 aa19.44■□□□□ 0.7
SLC6A1-203ENST00000460480 LRP10Q7Z4F1 713 aa19.44■□□□□ 0.7
SLC6A1-203ENST00000460480 MAP3K15Q6ZN16 1313 aa19.44■□□□□ 0.7
SLC6A1-203ENST00000460480 FAM177BA6PVY3 158 aa19.43■□□□□ 0.7
SLC6A1-203ENST00000460480 NEFMP07197 916 aa19.43■□□□□ 0.7
SLC6A1-203ENST00000460480 FKBP4Q02790 459 aaKnown RBP eCLIP19.43■□□□□ 0.7
SLC6A1-203ENST00000460480 CCDC93Q567U6 631 aa19.43■□□□□ 0.7
SLC6A1-203ENST00000460480 NGEFQ8N5V2 710 aa19.43■□□□□ 0.7
SLC6A1-203ENST00000460480 RRP7AQ9Y3A4 280 aaKnown RBP19.43■□□□□ 0.7
SLC6A1-203ENST00000460480 ALDH1B1P30837 517 aa19.42■□□□□ 0.7
SLC6A1-203ENST00000460480 L3MBTL3Q96JM7 780 aaPredicted RBP19.42■□□□□ 0.7
SLC6A1-203ENST00000460480 PNNQ9H307 717 aaKnown RBP19.42■□□□□ 0.7
SLC6A1-203ENST00000460480 SNED1Q8TER0 1413 aa19.42■□□□□ 0.7
SLC6A1-203ENST00000460480 POTEIP0CG38 1075 aa19.41■□□□□ 0.7
SLC6A1-203ENST00000460480 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
SLC6A1-203ENST00000460480 PDIA6Q15084 440 aa19.41■□□□□ 0.7
SLC6A1-203ENST00000460480 ZNF34Q8IZ26 560 aa19.41■□□□□ 0.7
SLC6A1-203ENST00000460480 RTKN2Q8IZC4 609 aa19.41■□□□□ 0.7
SLC6A1-203ENST00000460480 LAMB4A4D0S4 1761 aa19.4■□□□□ 0.7
SLC6A1-203ENST00000460480 CACNA1SQ13698 1873 aa19.4■□□□□ 0.7
SLC6A1-203ENST00000460480 HOXA10P31260 410 aaPredicted RBP19.4■□□□□ 0.7
SLC6A1-203ENST00000460480 NUTM1Q86Y26 1132 aa19.4■□□□□ 0.7
SLC6A1-203ENST00000460480 NYXQ9GZU5 481 aa19.4■□□□□ 0.7
SLC6A1-203ENST00000460480 ZNF277Q9NRM2 450 aaPredicted RBP19.4■□□□□ 0.7
SLC6A1-203ENST00000460480 UBN2Q6ZU65 1347 aa19.4■□□□□ 0.7
SLC6A1-203ENST00000460480 ABCC12Q96J65 1359 aa19.4■□□□□ 0.7
SLC6A1-203ENST00000460480 NUP98P52948 1817 aa19.39■□□□□ 0.7
SLC6A1-203ENST00000460480 MYL6BP14649 208 aa19.39■□□□□ 0.69
SLC6A1-203ENST00000460480 SUSD4Q5VX71 490 aa19.39■□□□□ 0.69
SLC6A1-203ENST00000460480 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
SLC6A1-203ENST00000460480 GIGYF2Q6Y7W6 1299 aaKnown RBP19.39■□□□□ 0.69
SLC6A1-203ENST00000460480 RIPK4P57078 832 aa19.38■□□□□ 0.69
SLC6A1-203ENST00000460480 ERBB4Q15303 1308 aa19.38■□□□□ 0.69
SLC6A1-203ENST00000460480 RALBP1Q15311 655 aa19.38■□□□□ 0.69
SLC6A1-203ENST00000460480 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
SLC6A1-203ENST00000460480 TAF1DQ9H5J8 278 aaPredicted RBP19.38■□□□□ 0.69
SLC6A1-203ENST00000460480 BABAM1Q9NWV8 329 aa19.38■□□□□ 0.69
SLC6A1-203ENST00000460480 RIC1Q4ADV7 1423 aa19.37■□□□□ 0.69
SLC6A1-203ENST00000460480 FZD9O00144 591 aa19.37■□□□□ 0.69
SLC6A1-203ENST00000460480 GTF2E1P29083 439 aaPredicted RBP19.37■□□□□ 0.69
SLC6A1-203ENST00000460480 TMPOP42166 694 aaKnown RBP19.37■□□□□ 0.69
SLC6A1-203ENST00000460480 ZBTB3Q9H5J0 574 aa19.37■□□□□ 0.69
SLC6A1-203ENST00000460480 IBTKQ9P2D0 1353 aaPredicted RBP19.36■□□□□ 0.69
SLC6A1-203ENST00000460480 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
SLC6A1-203ENST00000460480 MAPK8IP3Q9UPT6 1336 aa19.36■□□□□ 0.69
SLC6A1-203ENST00000460480 NTSR2O95665 410 aa19.36■□□□□ 0.69
SLC6A1-203ENST00000460480 GPTP24298 496 aa19.36■□□□□ 0.69
SLC6A1-203ENST00000460480 COL13A1Q5TAT6 717 aaPredicted RBP19.36■□□□□ 0.69
SLC6A1-203ENST00000460480 PSMD1Q99460 953 aa19.36■□□□□ 0.69
SLC6A1-203ENST00000460480 IARSP41252 1262 aaKnown RBP19.35■□□□□ 0.69
SLC6A1-203ENST00000460480 KIF6Q6ZMV9 814 aa19.35■□□□□ 0.69
SLC6A1-203ENST00000460480 TSPYL4Q9UJ04 414 aa19.35■□□□□ 0.69
SLC6A1-203ENST00000460480 IQCA1LA6NCM1 817 aa19.34■□□□□ 0.69
SLC6A1-203ENST00000460480 ITGBL1O95965 494 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms