RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 TEX13AQ9BXU3 409 aaPredicted RBP22.49■■□□□ 1.19
TMEM50B-205ENST00000459909 TBC1D2BQ9UPU7 963 aa22.49■■□□□ 1.19
TMEM50B-205ENST00000459909 SCN4AP35499 1836 aa22.49■■□□□ 1.19
TMEM50B-205ENST00000459909 IL6STP40189 918 aaPredicted RBP22.48■■□□□ 1.19
TMEM50B-205ENST00000459909 MAP2K1Q02750 393 aaPredicted RBP22.48■■□□□ 1.19
TMEM50B-205ENST00000459909 MTHFSDQ2M296 383 aaKnown RBP22.48■■□□□ 1.19
TMEM50B-205ENST00000459909 HACL1Q9UJ83 578 aa22.48■■□□□ 1.19
TMEM50B-205ENST00000459909 CLEC11AQ9Y240 323 aa22.48■■□□□ 1.19
TMEM50B-205ENST00000459909 CCDC93Q567U6 631 aa22.47■■□□□ 1.19
TMEM50B-205ENST00000459909 ZNF330Q9Y3S2 320 aaPredicted RBP22.47■■□□□ 1.19
TMEM50B-205ENST00000459909 SCN7AQ01118 1682 aa22.46■■□□□ 1.19
TMEM50B-205ENST00000459909 VIRMAQ69YN4 1812 aaKnown RBP22.46■■□□□ 1.19
TMEM50B-205ENST00000459909 PNMA8AQ86V59 439 aaPredicted RBP22.46■■□□□ 1.19
TMEM50B-205ENST00000459909 C7orf43Q8WVR3 580 aa22.46■■□□□ 1.19
TMEM50B-205ENST00000459909 UBR2Q8IWV8 1755 aa22.45■■□□□ 1.19
TMEM50B-205ENST00000459909 SLX4Q8IY92 1834 aa22.45■■□□□ 1.19
TMEM50B-205ENST00000459909 HMOX1P09601 288 aa22.45■■□□□ 1.18
TMEM50B-205ENST00000459909 EPHX2P34913 555 aa22.45■■□□□ 1.18
TMEM50B-205ENST00000459909 NPM2Q86SE8 214 aaKnown RBP22.45■■□□□ 1.18
TMEM50B-205ENST00000459909 ZNF496Q96IT1 587 aaPredicted RBP22.45■■□□□ 1.18
TMEM50B-205ENST00000459909 WDR33Q9C0J8 1336 aaKnown RBP22.45■■□□□ 1.18
TMEM50B-205ENST00000459909 HEG1Q9ULI3 1381 aa22.45■■□□□ 1.18
TMEM50B-205ENST00000459909 CAMTA2O94983 1202 aa22.44■■□□□ 1.18
TMEM50B-205ENST00000459909 FKBP4Q02790 459 aaKnown RBP eCLIP22.44■■□□□ 1.18
TMEM50B-205ENST00000459909 CNTROBQ8N137 903 aa22.44■■□□□ 1.18
TMEM50B-205ENST00000459909 ZNF541Q9H0D2 1346 aa22.44■■□□□ 1.18
TMEM50B-205ENST00000459909 PCDH10Q9P2E7 1040 aa22.43■■□□□ 1.18
TMEM50B-205ENST00000459909 MLLT1Q03111 559 aaPredicted RBP22.42■■□□□ 1.18
TMEM50B-205ENST00000459909 MAP1SQ66K74 1059 aaPredicted RBP22.42■■□□□ 1.18
TMEM50B-205ENST00000459909 ZNF790Q6PG37 636 aa22.42■■□□□ 1.18
TMEM50B-205ENST00000459909 ADAMTSL1Q8N6G6 1762 aa22.41■■□□□ 1.18
TMEM50B-205ENST00000459909 ZNF277Q9NRM2 450 aaPredicted RBP22.41■■□□□ 1.18
TMEM50B-205ENST00000459909 ABT1Q9ULW3 272 aaKnown RBP22.41■■□□□ 1.18
TMEM50B-205ENST00000459909 KNSTRNQ9Y448 316 aa22.41■■□□□ 1.18
TMEM50B-205ENST00000459909 ARFGEF2Q9Y6D5 1785 aa22.4■■□□□ 1.18
TMEM50B-205ENST00000459909 RNF123Q5XPI4 1314 aa22.4■■□□□ 1.18
TMEM50B-205ENST00000459909 NPR1P16066 1061 aa22.4■■□□□ 1.18
TMEM50B-205ENST00000459909 RGS19P49795 217 aa22.4■■□□□ 1.18
TMEM50B-205ENST00000459909 RTKN2Q8IZC4 609 aa22.4■■□□□ 1.18
TMEM50B-205ENST00000459909 CCDC85CA6NKD9 419 aa22.39■■□□□ 1.17
TMEM50B-205ENST00000459909 A1BGP04217 495 aa22.39■■□□□ 1.17
TMEM50B-205ENST00000459909 TEFQ10587 303 aa22.39■■□□□ 1.17
TMEM50B-205ENST00000459909 NBPF5PQ86XG9 351 aaPredicted RBP22.39■■□□□ 1.17
TMEM50B-205ENST00000459909 FZD9O00144 591 aa22.38■■□□□ 1.17
TMEM50B-205ENST00000459909 DZIP3Q86Y13 1208 aaKnown RBP22.38■■□□□ 1.17
TMEM50B-205ENST00000459909 GPC2Q8N158 579 aa22.38■■□□□ 1.17
TMEM50B-205ENST00000459909 FMNL2Q96PY5 1086 aa22.38■■□□□ 1.17
TMEM50B-205ENST00000459909 BEGAINQ9BUH8 593 aa22.38■■□□□ 1.17
TMEM50B-205ENST00000459909 KLRG2A4D1S0 409 aaPredicted RBP22.37■■□□□ 1.17
TMEM50B-205ENST00000459909 CLEC4GQ6UXB4 293 aa22.37■■□□□ 1.17
TMEM50B-205ENST00000459909 DDX21Q9NR30 783 aaKnown RBP eCLIP22.37■■□□□ 1.17
TMEM50B-205ENST00000459909 IARSP41252 1262 aaKnown RBP22.36■■□□□ 1.17
TMEM50B-205ENST00000459909 CACNA1SQ13698 1873 aa22.35■■□□□ 1.17
TMEM50B-205ENST00000459909 DIAPH1O60610 1272 aaKnown RBP22.35■■□□□ 1.17
TMEM50B-205ENST00000459909 ECE1P42892 770 aa22.35■■□□□ 1.17
TMEM50B-205ENST00000459909 IL17REQ8NFR9 667 aa22.35■■□□□ 1.17
TMEM50B-205ENST00000459909 OLFM4Q6UX06 510 aa22.34■■□□□ 1.17
TMEM50B-205ENST00000459909 CAPNS2Q96L46 248 aa22.34■■□□□ 1.17
TMEM50B-205ENST00000459909 ZNF652Q9Y2D9 606 aa22.34■■□□□ 1.17
TMEM50B-205ENST00000459909 GNAT3A8MTJ3 354 aa22.33■■□□□ 1.17
TMEM50B-205ENST00000459909 AMER1Q5JTC6 1135 aaPredicted RBP22.33■■□□□ 1.17
TMEM50B-205ENST00000459909 TPTE2Q6XPS3 522 aa22.33■■□□□ 1.17
TMEM50B-205ENST00000459909 SYNE4Q8N205 404 aa22.33■■□□□ 1.17
TMEM50B-205ENST00000459909 ALDH1B1P30837 517 aa22.32■■□□□ 1.16
TMEM50B-205ENST00000459909 PAXIP1Q6ZW49 1069 aaPredicted RBP22.32■■□□□ 1.16
TMEM50B-205ENST00000459909 GAS2L2Q8NHY3 880 aa22.32■■□□□ 1.16
TMEM50B-205ENST00000459909 JDP2Q8WYK2 163 aa22.32■■□□□ 1.16
TMEM50B-205ENST00000459909 GPR101Q96P66 508 aaPredicted RBP22.32■■□□□ 1.16
TMEM50B-205ENST00000459909 THSD7BQ9C0I4 1608 aa22.31■■□□□ 1.16
TMEM50B-205ENST00000459909 BCORQ6W2J9 1755 aa22.31■■□□□ 1.16
TMEM50B-205ENST00000459909 LMOD1P29536 600 aaPredicted RBP22.3■■□□□ 1.16
TMEM50B-205ENST00000459909 PSMD1Q99460 953 aa22.3■■□□□ 1.16
TMEM50B-205ENST00000459909 RGL2O15211 777 aa22.29■■□□□ 1.16
TMEM50B-205ENST00000459909 EIF6P56537 245 aaKnown RBP22.29■■□□□ 1.16
TMEM50B-205ENST00000459909 CYP4F22Q6NT55 531 aa22.29■■□□□ 1.16
TMEM50B-205ENST00000459909 GRM1Q13255 1194 aa22.28■■□□□ 1.16
TMEM50B-205ENST00000459909 NIP7Q9Y221 180 aaKnown RBP eCLIP22.28■■□□□ 1.16
TMEM50B-205ENST00000459909 USP16Q9Y5T5 823 aa22.28■■□□□ 1.16
TMEM50B-205ENST00000459909 GJA3Q9Y6H8 435 aa22.28■■□□□ 1.16
TMEM50B-205ENST00000459909 BTBD11A6QL63 1104 aa22.27■■□□□ 1.16
TMEM50B-205ENST00000459909 KCNQ3O43525 872 aa22.27■■□□□ 1.16
TMEM50B-205ENST00000459909 MAP2K2P36507 400 aa22.27■■□□□ 1.16
TMEM50B-205ENST00000459909 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
TMEM50B-205ENST00000459909 TLL2Q9Y6L7 1015 aa22.27■■□□□ 1.16
TMEM50B-205ENST00000459909 CEMIPQ8WUJ3 1361 aa22.26■■□□□ 1.15
TMEM50B-205ENST00000459909 FMR1Q06787 632 aaKnown RBP eCLIP22.26■■□□□ 1.15
TMEM50B-205ENST00000459909 CST9Q5W186 159 aa22.26■■□□□ 1.15
TMEM50B-205ENST00000459909 CC2D2BQ6DHV5 1058 aa22.26■■□□□ 1.15
TMEM50B-205ENST00000459909 KIF7Q2M1P5 1343 aa22.26■■□□□ 1.15
TMEM50B-205ENST00000459909 SIPA1L3O60292 1781 aaPredicted RBP22.25■■□□□ 1.15
TMEM50B-205ENST00000459909 SNED1Q8TER0 1413 aa22.25■■□□□ 1.15
TMEM50B-205ENST00000459909 SCNN1DP51172 638 aa22.25■■□□□ 1.15
TMEM50B-205ENST00000459909 USP50Q70EL3 339 aaPredicted RBP22.25■■□□□ 1.15
TMEM50B-205ENST00000459909 CA12O43570 354 aa22.24■■□□□ 1.15
TMEM50B-205ENST00000459909 EPS15P42566 896 aa22.24■■□□□ 1.15
TMEM50B-205ENST00000459909 TSKSQ9UJT2 592 aa22.24■■□□□ 1.15
TMEM50B-205ENST00000459909 FAM177BA6PVY3 158 aa22.23■■□□□ 1.15
TMEM50B-205ENST00000459909 GTF2E1P29083 439 aaPredicted RBP22.23■■□□□ 1.15
TMEM50B-205ENST00000459909 CFAP44Q96MT7 982 aa22.23■■□□□ 1.15
TMEM50B-205ENST00000459909 MCOLN1Q9GZU1 580 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms