RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 MYD88Q99836 296 aa7.26□□□□□ -1.25
RNU1-88P-201ENST00000459274 METTL22Q9BUU2 404 aaPredicted RBP7.26□□□□□ -1.25
RNU1-88P-201ENST00000459274 ZBTB40Q9NUA8 1239 aa7.26□□□□□ -1.25
RNU1-88P-201ENST00000459274 CCNL1Q9UK58 526 aaPredicted RBP7.26□□□□□ -1.25
RNU1-88P-201ENST00000459274 C5P01031 1676 aa7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 ANXA1P04083 346 aa7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 A1BGP04217 495 aa7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 HDAC1Q13547 482 aaPredicted RBP7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 SLC27A3Q5K4L6 730 aa7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 PPP1R42Q7Z4L9 355 aa7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 DZIP3Q86Y13 1208 aaKnown RBP7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 CCDC191Q8NCU4 936 aa7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 AK7Q96M32 723 aa7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 CWC25Q9NXE8 425 aaPredicted RBP7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 RTCBQ9Y3I0 505 aaKnown RBP7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 PAPPAQ13219 1627 aa7.25□□□□□ -1.25
RNU1-88P-201ENST00000459274 BTAF1O14981 1849 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 SBF2Q86WG5 1849 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 TOGARAM1Q9Y4F4 1720 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 PRAMEF22A3QJZ6 481 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 ERVV-1B6SEH8 477 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 GRM8O00222 908 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 CYP19A1P11511 503 aaPredicted RBP7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 RFC4P35249 363 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 CRKLP46109 303 aaKnown RBP7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 TAF7LQ5H9L4 462 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 ERC1Q8IUD2 1116 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 BCL11AQ9H165 835 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 ZBTB3Q9H5J0 574 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 CHMP3Q9Y3E7 222 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 THSD7AQ9UPZ6 1657 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 BRWD3Q6RI45 1802 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 GLI3P10071 1580 aa7.24□□□□□ -1.25
RNU1-88P-201ENST00000459274 NHSQ6T4R5 1651 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 KCNQ2O43526 872 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 RAB11FIP3O75154 756 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 TRIM37O94972 964 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 APBA3O96018 575 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 ATP8B2P98198 1209 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 G3BP1Q13283 466 aaKnown RBP eCLIP7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 TCIRG1Q13488 830 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 BEND3Q5T5X7 828 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 RC3H1Q5TC82 1133 aaKnown RBP7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 ANKRD45Q5TZF3 282 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 CASC1Q6TDU7 716 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 FLAD1Q8NFF5 587 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 GPATCH3Q96I76 525 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 UPF2Q9HAU5 1272 aaKnown RBP7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 ATP10DQ9P241 1426 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 MAP3K15Q6ZN16 1313 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 N4BP2Q86UW6 1770 aaPredicted RBP7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 ARFGEF2Q9Y6D5 1785 aa7.23□□□□□ -1.25
RNU1-88P-201ENST00000459274 NUP98P52948 1817 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 ZNF831Q5JPB2 1677 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 KCPQ6ZWJ8 1503 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 SRGAP3O43295 1099 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 PIP4K2AP48426 406 aaPredicted RBP7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 RGS3P49796 1198 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 GCKRQ14397 625 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 PDIA6Q15084 440 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 PROSER3Q2NL68 480 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 CCDC57Q2TAC2 916 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 PARP10Q53GL7 1025 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 FAM182BQ5T319 152 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 CLEC4GQ6UXB4 293 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 GIGYF2Q6Y7W6 1299 aaKnown RBP7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 ANKRD44Q8N8A2 993 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 MEIS3Q99687 375 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 NYXQ9GZU5 481 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 USP44Q9H0E7 712 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 TRMT112Q9UI30 125 aaKnown RBP7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 TNNQ9UQP3 1299 aa7.22□□□□□ -1.25
RNU1-88P-201ENST00000459274 NEURL1BA8MQ27 555 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 ATP5J2-PTCD1G3V325 749 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 APBB1O00213 710 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 RGL2O15211 777 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 GNPATO15228 680 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 RPS6KA4O75676 772 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 SURF6O75683 361 aaKnown RBP7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 BAG6P46379 1132 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 CWF19L2Q2TBE0 894 aaKnown RBP7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 UBE3BQ7Z3V4 1068 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 SETDB2Q96T68 719 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 LRRCC1Q9C099 1032 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 TBC1D2BQ9UPU7 963 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 PCDHB15Q9Y5E8 787 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 LRRFIP2Q9Y608 721 aaKnown RBP7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 CNTNAP4Q9C0A0 1308 aa7.21□□□□□ -1.26
RNU1-88P-201ENST00000459274 ADCY9O60503 1353 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 RGS12O14924 1447 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 NBPF26B4DH59 902 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 PLSCR1O15162 318 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 IGHDP01880 384 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 NBPF14Q5TI25 921 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 CEP85Q6P2H3 762 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 NBPF10Q6P3W6 841 aaKnown RBP7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 TPTE2Q6XPS3 522 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 CHD1LQ86WJ1 897 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms