RNA–Protein interactions for RNA: ENST00000458657.6

C1orf228-218, Transcript of Uncharacterized protein C1orf228, human

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-218	ENST00000458657	SMC5	Q8IY18	1101 aa		18.32	■□□□□ 0.52
C1orf228-218	ENST00000458657	PLBD2	Q8NHP8	589 aa		18.32	■□□□□ 0.52
C1orf228-218	ENST00000458657	SMARCC1	Q92922	1105 aa	Predicted RBP	18.32	■□□□□ 0.52
C1orf228-218	ENST00000458657	METTL22	Q9BUU2	404 aa	Predicted RBP	18.32	■□□□□ 0.52
C1orf228-218	ENST00000458657	PDZRN3	Q9UPQ7	1066 aa		18.32	■□□□□ 0.52
C1orf228-218	ENST00000458657	IGKV5-2	P06315	115 aa		18.31	■□□□□ 0.52
C1orf228-218	ENST00000458657	NEXN	Q0ZGT2	675 aa		18.31	■□□□□ 0.52
C1orf228-218	ENST00000458657	ZNF772	Q68DY9	489 aa	Predicted RBP	18.31	■□□□□ 0.52
C1orf228-218	ENST00000458657	ZBTB3	Q9H5J0	574 aa		18.3	■□□□□ 0.52
C1orf228-218	ENST00000458657	ZBTB1	Q9Y2K1	713 aa		18.3	■□□□□ 0.52
C1orf228-218	ENST00000458657	COL5A3	P25940	1745 aa	Predicted RBP	18.3	■□□□□ 0.52
C1orf228-218	ENST00000458657	ITPK1	Q13572	414 aa		18.3	■□□□□ 0.52
C1orf228-218	ENST00000458657	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.3	■□□□□ 0.52
C1orf228-218	ENST00000458657	NEURL1B	A8MQ27	555 aa		18.29	■□□□□ 0.52
C1orf228-218	ENST00000458657	FBXO41	Q8TF61	875 aa		18.29	■□□□□ 0.52
C1orf228-218	ENST00000458657	ZNF831	Q5JPB2	1677 aa		18.29	■□□□□ 0.52
C1orf228-218	ENST00000458657	RREB1	Q92766	1687 aa		18.28	■□□□□ 0.52
C1orf228-218	ENST00000458657	ATP5J2-PTCD1	G3V325	749 aa		18.28	■□□□□ 0.52
C1orf228-218	ENST00000458657	GCC1	Q96CN9	775 aa		18.28	■□□□□ 0.52
C1orf228-218	ENST00000458657	MYH14	Q7Z406	1995 aa	Known RBP	18.27	■□□□□ 0.52
C1orf228-218	ENST00000458657	GRM8	O00222	908 aa		18.27	■□□□□ 0.52
C1orf228-218	ENST00000458657	RBM6	P78332	1123 aa	Known RBP	18.27	■□□□□ 0.52
C1orf228-218	ENST00000458657	ARX	Q96QS3	562 aa		18.27	■□□□□ 0.52
C1orf228-218	ENST00000458657	CRKL	P46109	303 aa	Known RBP	18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	GCKR	Q14397	625 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	KIF6	Q6ZMV9	814 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	KRT27	Q7Z3Y8	459 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	EP400	Q96L91	3159 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	PNMA6E	A0A0J9YXQ4	647 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	HMMR	O75330	724 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	KCNQ4	P56696	695 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	INTS5	Q6P9B9	1019 aa	Known RBP	18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	TSHZ2	Q9NRE2	1034 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	CCDC87	Q9NVE4	849 aa		18.26	■□□□□ 0.51
C1orf228-218	ENST00000458657	LY75	O60449	1722 aa		18.25	■□□□□ 0.51
C1orf228-218	ENST00000458657	ATP8B2	P98198	1209 aa		18.25	■□□□□ 0.51
C1orf228-218	ENST00000458657	NUCB1	Q02818	461 aa		18.25	■□□□□ 0.51
C1orf228-218	ENST00000458657	DCTPP1	Q9H773	170 aa		18.25	■□□□□ 0.51
C1orf228-218	ENST00000458657	UTY	O14607	1347 aa		18.25	■□□□□ 0.51
C1orf228-218	ENST00000458657	IL6ST	P40189	918 aa	Predicted RBP	18.24	■□□□□ 0.51
C1orf228-218	ENST00000458657	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.24	■□□□□ 0.51
C1orf228-218	ENST00000458657	ANKRD45	Q5TZF3	282 aa		18.23	■□□□□ 0.51
C1orf228-218	ENST00000458657	LNPK	Q9C0E8	428 aa		18.23	■□□□□ 0.51
C1orf228-218	ENST00000458657	CHD1L	Q86WJ1	897 aa		18.23	■□□□□ 0.51
C1orf228-218	ENST00000458657	LINC00116	Q8NCU8	138 aa		18.23	■□□□□ 0.51
C1orf228-218	ENST00000458657	JARID2	Q92833	1246 aa	Predicted RBP	18.23	■□□□□ 0.51
C1orf228-218	ENST00000458657	SUCLG2	Q96I99	432 aa		18.23	■□□□□ 0.51
C1orf228-218	ENST00000458657	MAP3K15	Q6ZN16	1313 aa		18.23	■□□□□ 0.51
C1orf228-218	ENST00000458657	ANKRD36C	Q5JPF3	1778 aa		18.22	■□□□□ 0.51
C1orf228-218	ENST00000458657	PDE4A	P27815	886 aa		18.22	■□□□□ 0.51
C1orf228-218	ENST00000458657	PPP1R42	Q7Z4L9	355 aa		18.22	■□□□□ 0.51
C1orf228-218	ENST00000458657	NUP98	P52948	1817 aa		18.22	■□□□□ 0.51
C1orf228-218	ENST00000458657	APBB1	O00213	710 aa		18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	FAM196A	Q6ZSG2	479 aa		18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	NPM2	Q86SE8	214 aa	Known RBP	18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	TBC1D2B	Q9UPU7	963 aa		18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657		A0A087WZG4	1122 aa		18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	SRGAP3	O43295	1099 aa		18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	EIF5	P55010	431 aa	Known RBP	18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	UBE3B	Q7Z3V4	1068 aa		18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	DZIP3	Q86Y13	1208 aa	Known RBP	18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	KAZALD1	Q96I82	304 aa		18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.21	■□□□□ 0.51
C1orf228-218	ENST00000458657	TAF1L	Q8IZX4	1826 aa		18.21	■□□□□ 0.5
C1orf228-218	ENST00000458657	TCIRG1	Q13488	830 aa		18.2	■□□□□ 0.5
C1orf228-218	ENST00000458657	HLF	Q16534	295 aa		18.2	■□□□□ 0.5
C1orf228-218	ENST00000458657	SSH3	Q8TE77	659 aa		18.2	■□□□□ 0.5
C1orf228-218	ENST00000458657	BCL11A	Q9H165	835 aa		18.2	■□□□□ 0.5
C1orf228-218	ENST00000458657	CWC25	Q9NXE8	425 aa	Predicted RBP	18.2	■□□□□ 0.5
C1orf228-218	ENST00000458657	CCNL1	Q9UK58	526 aa	Predicted RBP	18.2	■□□□□ 0.5
C1orf228-218	ENST00000458657	HDAC5	Q9UQL6	1122 aa		18.2	■□□□□ 0.5
C1orf228-218	ENST00000458657	EXOC6B	Q9Y2D4	811 aa		18.2	■□□□□ 0.5
C1orf228-218	ENST00000458657	RXRB	P28702	533 aa		18.19	■□□□□ 0.5
C1orf228-218	ENST00000458657	BICC1	Q9H694	974 aa	Known RBP	18.19	■□□□□ 0.5
C1orf228-218	ENST00000458657	RGS17	Q9UGC6	210 aa	Predicted RBP	18.19	■□□□□ 0.5
C1orf228-218	ENST00000458657	POLA2	Q14181	598 aa		18.19	■□□□□ 0.5
C1orf228-218	ENST00000458657	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.19	■□□□□ 0.5
C1orf228-218	ENST00000458657	ISCA1	Q9BUE6	129 aa		18.19	■□□□□ 0.5
C1orf228-218	ENST00000458657	TRIM37	O94972	964 aa		18.18	■□□□□ 0.5
C1orf228-218	ENST00000458657	RTL5	Q5HYW3	569 aa	Predicted RBP	18.18	■□□□□ 0.5
C1orf228-218	ENST00000458657	CCDC191	Q8NCU4	936 aa		18.18	■□□□□ 0.5
C1orf228-218	ENST00000458657	COL15A1	P39059	1388 aa		18.18	■□□□□ 0.5
C1orf228-218	ENST00000458657	CASP7	P55210	303 aa		18.17	■□□□□ 0.5
C1orf228-218	ENST00000458657	MTX1	Q13505	466 aa		18.17	■□□□□ 0.5
C1orf228-218	ENST00000458657	CNTNAP4	Q9C0A0	1308 aa		18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657	SMARCA5	O60264	1052 aa	Predicted RBP	18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657	EPHA10	Q5JZY3	1008 aa		18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657	BCOR	Q6W2J9	1755 aa		18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657	ERVV-1	B6SEH8	477 aa		18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657		H7C1W4	665 aa		18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657	GPT	P24298	496 aa		18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657	POTEA	Q6S8J7	498 aa		18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.16	■□□□□ 0.5
C1orf228-218	ENST00000458657	C4B	P0C0L5	1744 aa		18.15	■□□□□ 0.5
C1orf228-218	ENST00000458657	SURF6	O75683	361 aa	Known RBP	18.14	■□□□□ 0.5
C1orf228-218	ENST00000458657	HSP90AB3P	Q58FF7	597 aa		18.14	■□□□□ 0.5
C1orf228-218	ENST00000458657	TRIM28	Q13263	835 aa	Known RBP	18.14	■□□□□ 0.49
C1orf228-218	ENST00000458657	SMIM5	Q71RC9	77 aa		18.14	■□□□□ 0.49
C1orf228-218	ENST00000458657	CAMTA2	O94983	1202 aa		18.13	■□□□□ 0.49
C1orf228-218	ENST00000458657	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms