RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
CLTCL1-204ENST00000458188 MSL1Q68DK7 614 aa11.1□□□□□ -0.63
CLTCL1-204ENST00000458188 BICDL1Q6ZP65 573 aa11.1□□□□□ -0.63
CLTCL1-204ENST00000458188 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-204ENST00000458188 C5P01031 1676 aa11.1□□□□□ -0.63
CLTCL1-204ENST00000458188 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 LY75O60449 1722 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 COL15A1P39059 1388 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 ZPR1O75312 459 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 SSFA2P28290 1259 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 KIF6Q6ZMV9 814 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 ANKRD13DQ6ZTN6 518 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 RIC3Q7Z5B4 369 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 CEP350Q5VT06 3117 aa11.09□□□□□ -0.63
CLTCL1-204ENST00000458188 A0A087WZG4 1122 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 PI4KAP2A4QPH2 592 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 FAM177BA6PVY3 158 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 CAMTA2O94983 1202 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 FKBP8Q14318 412 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 PI4KAP1Q8N8J0 262 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 CHMP4AQ9BY43 222 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 BCL2L12Q9HB09 334 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 MAP3K2Q9Y2U5 619 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 C4BP0C0L5 1744 aa11.08□□□□□ -0.64
CLTCL1-204ENST00000458188 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 GPTP24298 496 aa11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 HMGB2P26583 209 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 SLC4A10Q6U841 1118 aa11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 KSR2Q6VAB6 950 aa11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 MYD88Q99836 296 aa11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 SGIP1Q9BQI5 828 aa11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 SUPT16HQ9Y5B9 1047 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 MAP3K15Q6ZN16 1313 aa11.07□□□□□ -0.64
CLTCL1-204ENST00000458188 DDX58O95786 925 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 GYS1P13807 737 aa11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 ADRA2BP18089 450 aa11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 TBC1D9BQ66K14 1250 aa11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 FLAD1Q8NFF5 587 aa11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 JARID2Q92833 1246 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 USP42Q9H9J4 1324 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-204ENST00000458188 ADCY9O60503 1353 aa11.05□□□□□ -0.64
CLTCL1-204ENST00000458188 GRIN3BO60391 1043 aa11.05□□□□□ -0.64
CLTCL1-204ENST00000458188 HSPA6P17066 643 aa11.05□□□□□ -0.64
CLTCL1-204ENST00000458188 C20orf194Q5TEA3 1177 aa11.05□□□□□ -0.64
CLTCL1-204ENST00000458188 ZKSCAN2Q63HK3 967 aa11.05□□□□□ -0.64
CLTCL1-204ENST00000458188 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
CLTCL1-204ENST00000458188 ERVV-1B6SEH8 477 aa11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 TRIM27P14373 513 aa11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 CWF19L2Q2TBE0 894 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 RTL5Q5HYW3 569 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 GIGYF2Q6Y7W6 1299 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 PANK1Q8TE04 598 aa11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 METTL22Q9BUU2 404 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 NIP7Q9Y221 180 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 MYH14Q7Z406 1995 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-204ENST00000458188 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 CENPBP07199 599 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 RLBP1P12271 317 aa11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 POLD1P28340 1107 aa11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 IRX6P78412 446 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 TCIRG1Q13488 830 aa11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 NFIXQ14938 502 aa11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 ATF7IPQ6VMQ6 1270 aa11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 ZNF831Q5JPB2 1677 aa11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 COL5A3P25940 1745 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 PTPRCP08575 1304 aa11.03□□□□□ -0.64
CLTCL1-204ENST00000458188 IGKV5-2P06315 115 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 MMP10P09238 476 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 RRP1P56182 461 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 DDR1Q08345 913 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 BEND3Q5T5X7 828 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 SUSD4Q5VX71 490 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 SYNE4Q8N205 404 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 NLGN1Q8N2Q7 840 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 TMEM57Q8N5G2 664 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 API5Q9BZZ5 524 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 UBN2Q6ZU65 1347 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 KIF16BQ96L93 1317 aa11.02□□□□□ -0.65
CLTCL1-204ENST00000458188 LAMB4A4D0S4 1761 aa11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 TAF1LQ8IZX4 1826 aa11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 TM4SF1P30408 202 aa11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 CLEC4GQ6UXB4 293 aa11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 FTSJ3Q8IY81 847 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 ARHGAP45Q92619 1136 aa11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 ISCA1Q9BUE6 129 aa11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-204ENST00000458188 NEURL1BA8MQ27 555 aa11□□□□□ -0.65
CLTCL1-204ENST00000458188 SERPINB2P05120 415 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms