RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ZIC5Q96T25 663 aa5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 ZNF777Q9ULD5 760 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 PIK3R2O00459 728 aa5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 EFSO43281 561 aa5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 ADH6P28332 368 aa5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 LAMC2Q13753 1193 aa5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 TEAD4Q15561 434 aa5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 ARSJQ5FYB0 599 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 TRIM50Q86XT4 487 aa5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 ZDHHC1Q8WTX9 485 aa5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 CABP1Q9NZU7 370 aa5.81□□□□□ -1.48
HMGB3P30-201ENST00000457863 USP17L3A6NCW0 530 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 USP17L4A6NCW7 530 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 POM121CA8CG34 1229 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 GNB5O14775 395 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 PPM1GO15355 546 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 COL8A1P27658 744 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 PSME1Q06323 249 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 PDE4CQ08493 712 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 ZNF468Q5VIY5 522 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 USP17L2Q6R6M4 530 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 POTEAQ6S8J7 498 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 LINC00114Q6XXX2 140 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 USP17L1Q7RTZ2 530 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 CCDC97Q96F63 343 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 UCN2Q96RP3 112 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 RRAGCQ9HB90 399 aa5.8□□□□□ -1.48
HMGB3P30-201ENST00000457863 KRBA1A5PL33 1030 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 NEURL1BA8MQ27 555 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 EML1O00423 815 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 KHNYNO15037 678 aaKnown RBP5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 CD33P20138 364 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 AMPD1P23109 780 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 TXLNAP40222 546 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 ATP1A2P50993 1020 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 HIRAP54198 1017 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 FCHSD1Q86WN1 690 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 SLC9A9Q8IVB4 645 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 DEPDC4Q8N2C3 294 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 L3MBTL2Q969R5 705 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 BTBD6Q96KE9 485 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 KLF15Q9UIH9 416 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 KIAA1024Q9UPX6 916 aa5.79□□□□□ -1.48
HMGB3P30-201ENST00000457863 M0R2N6 131 aa5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 ATP9BO43861 1147 aa5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 CLDN10P78369 228 aa5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 BICDL1Q6ZP65 573 aa5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 CHSY3Q70JA7 882 aa5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 MDFIQ99750 246 aa5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 CWC22Q9HCG8 908 aaKnown RBP5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 NOP53Q9NZM5 478 aaKnown RBP5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 MARK1Q9P0L2 795 aa5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 GJA3Q9Y6H8 435 aa5.78□□□□□ -1.48
HMGB3P30-201ENST00000457863 PATL2C9JE40 543 aaKnown RBP5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 CANXP27824 592 aaKnown RBP5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 NOS2P35228 1153 aa5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 PSMA6P60900 246 aaKnown RBP5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 SIX5Q8N196 739 aa5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 TPCN2Q8NHX9 752 aa5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 C7orf43Q8WVR3 580 aa5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 IGSF5Q9NSI5 407 aa5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 PARP3Q9Y6F1 533 aa5.77□□□□□ -1.49
HMGB3P30-201ENST00000457863 SERTM1A2A2V5 107 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 ZBTB7BO15156 539 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 ADAM23O75077 832 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 GRIN2CQ14957 1233 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 CCDC102BQ68D86 513 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 CERS3Q8IU89 383 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 TNS4Q8IZW8 715 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 FNBP4Q8N3X1 1017 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 LARGE2Q8N3Y3 721 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 SUV39H2Q9H5I1 410 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 STRN4Q9NRL3 753 aa5.76□□□□□ -1.49
HMGB3P30-201ENST00000457863 PALM3A6NDB9 673 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P30-201ENST00000457863 HDGFL1Q5TGJ6 251 aa5.75□□□□□ -1.49
HMGB3P30-201ENST00000457863 C1orf53Q5VUE5 145 aa5.75□□□□□ -1.49
HMGB3P30-201ENST00000457863 OGFOD1Q8N543 542 aa5.75□□□□□ -1.49
HMGB3P30-201ENST00000457863 BCCIPQ9P287 314 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB3P30-201ENST00000457863 PRR12Q9ULL5 1215 aa5.75□□□□□ -1.49
HMGB3P30-201ENST00000457863 ZNF232Q9UNY5 417 aa5.75□□□□□ -1.49
HMGB3P30-201ENST00000457863 ELOA3CA0A087WX78 387 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 ELOA3DA6NLF2 546 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 SIN3BO75182 1162 aa5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 DKK1O94907 266 aa5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 PCBP4P57723 403 aaKnown RBP5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 ELOA3BQ3SY89 546 aa5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 TBCELQ5QJ74 424 aa5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 SH3PXD2AQ5TCZ1 1133 aa5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 LRRC69Q6ZNQ3 347 aa5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 PROSER2Q86WR7 435 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 ELOA3Q8NG57 546 aa5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 RHPN1Q8TCX5 695 aa5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 TSPAN10Q9H1Z9 355 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P30-201ENST00000457863 ADARB2-AS1A8MUL3 147 aa5.73□□□□□ -1.49
HMGB3P30-201ENST00000457863 BAG6P46379 1132 aa5.73□□□□□ -1.49
HMGB3P30-201ENST00000457863 STAG2Q8N3U4 1231 aa5.73□□□□□ -1.49
HMGB3P30-201ENST00000457863 TNFRSF25Q93038 417 aa5.73□□□□□ -1.49
HMGB3P30-201ENST00000457863 MKRN1Q9UHC7 482 aaKnown RBP5.73□□□□□ -1.49
HMGB3P30-201ENST00000457863 CHMP3Q9Y3E7 222 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms