RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 TBC1D2BQ9UPU7 963 aa19.38■□□□□ 0.69
LSS-205ENST00000457828 KIDINS220Q9ULH0 1771 aa19.38■□□□□ 0.69
LSS-205ENST00000457828 GSPT1P15170 499 aaKnown RBP19.38■□□□□ 0.69
LSS-205ENST00000457828 UBE3BQ7Z3V4 1068 aa19.38■□□□□ 0.69
LSS-205ENST00000457828 ARHGEF25Q86VW2 580 aa19.38■□□□□ 0.69
LSS-205ENST00000457828 CCDC83Q8IWF9 413 aa19.38■□□□□ 0.69
LSS-205ENST00000457828 JAKMIP1Q96N16 626 aaKnown RBP19.38■□□□□ 0.69
LSS-205ENST00000457828 ZNF219Q9P2Y4 722 aaPredicted RBP19.38■□□□□ 0.69
LSS-205ENST00000457828 HCLS1P14317 486 aaPredicted RBP19.37■□□□□ 0.69
LSS-205ENST00000457828 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
LSS-205ENST00000457828 CEP152O94986 1710 aa19.37■□□□□ 0.69
LSS-205ENST00000457828 CLTCQ00610 1675 aaKnown RBP19.37■□□□□ 0.69
LSS-205ENST00000457828 CASTP20810 708 aaKnown RBP19.37■□□□□ 0.69
LSS-205ENST00000457828 ZNF771Q7L3S4 317 aaPredicted RBP19.37■□□□□ 0.69
LSS-205ENST00000457828 GNL3LQ9NVN8 582 aaKnown RBP19.37■□□□□ 0.69
LSS-205ENST00000457828 ARHGEF40Q8TER5 1519 aa19.37■□□□□ 0.69
LSS-205ENST00000457828 STK3Q13188 491 aa19.37■□□□□ 0.69
LSS-205ENST00000457828 PLEKHF1Q96S99 279 aa19.37■□□□□ 0.69
LSS-205ENST00000457828 TFCP2L1Q9NZI6 479 aa19.37■□□□□ 0.69
LSS-205ENST00000457828 TTC39AQ5SRH9 613 aa19.37■□□□□ 0.69
LSS-205ENST00000457828 RNF20Q5VTR2 975 aa19.37■□□□□ 0.69
LSS-205ENST00000457828 CEBPZQ03701 1054 aaKnown RBP19.36■□□□□ 0.69
LSS-205ENST00000457828 AACSQ86V21 672 aa19.36■□□□□ 0.69
LSS-205ENST00000457828 QTRT2Q9H974 415 aaKnown RBP19.36■□□□□ 0.69
LSS-205ENST00000457828 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
LSS-205ENST00000457828 CCDC192P0DO97 292 aa19.35■□□□□ 0.69
LSS-205ENST00000457828 METTL24Q5JXM2 366 aa19.35■□□□□ 0.69
LSS-205ENST00000457828 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
LSS-205ENST00000457828 CAMK4Q16566 473 aa19.35■□□□□ 0.69
LSS-205ENST00000457828 LARP1BQ659C4 914 aaKnown RBP19.35■□□□□ 0.69
LSS-205ENST00000457828 USP6P35125 1406 aa19.35■□□□□ 0.69
LSS-205ENST00000457828 ERBB4Q15303 1308 aa19.35■□□□□ 0.69
LSS-205ENST00000457828 IFIT5Q13325 482 aaKnown RBP19.35■□□□□ 0.69
LSS-205ENST00000457828 PTPRCP08575 1304 aa19.35■□□□□ 0.69
LSS-205ENST00000457828 CROCC2H7BZ55 1655 aa19.35■□□□□ 0.69
LSS-205ENST00000457828 ADCY5O95622 1261 aa19.34■□□□□ 0.69
LSS-205ENST00000457828 TRDNQ13061 729 aa19.34■□□□□ 0.69
LSS-205ENST00000457828 CCDC183Q5T5S1 534 aa19.34■□□□□ 0.69
LSS-205ENST00000457828 FKBP4Q02790 459 aaKnown RBP eCLIP19.34■□□□□ 0.69
LSS-205ENST00000457828 KIF3AQ9Y496 699 aa19.34■□□□□ 0.69
LSS-205ENST00000457828 ESYT1Q9BSJ8 1104 aa19.34■□□□□ 0.69
LSS-205ENST00000457828 TTC12Q9H892 705 aaPredicted RBP19.34■□□□□ 0.69
LSS-205ENST00000457828 CWC25Q9NXE8 425 aaPredicted RBP19.34■□□□□ 0.69
LSS-205ENST00000457828 KDM4FA0A1W2PPD8 638 aa19.33■□□□□ 0.69
LSS-205ENST00000457828 NBPF5PQ86XG9 351 aaPredicted RBP19.33■□□□□ 0.69
LSS-205ENST00000457828 ADGRB3O60242 1522 aa19.33■□□□□ 0.69
LSS-205ENST00000457828 ZNF790Q6PG37 636 aa19.33■□□□□ 0.69
LSS-205ENST00000457828 PDRG1Q9NUG6 133 aa19.33■□□□□ 0.68
LSS-205ENST00000457828 CBX1P83916 185 aa19.32■□□□□ 0.68
LSS-205ENST00000457828 RTCBQ9Y3I0 505 aaKnown RBP19.32■□□□□ 0.68
LSS-205ENST00000457828 USP48Q86UV5 1035 aa19.32■□□□□ 0.68
LSS-205ENST00000457828 LMTK2Q8IWU2 1503 aa19.32■□□□□ 0.68
LSS-205ENST00000457828 KRT85P78386 507 aa19.32■□□□□ 0.68
LSS-205ENST00000457828 DTNBO60941 627 aa19.32■□□□□ 0.68
LSS-205ENST00000457828 ZNF445P59923 1031 aa19.32■□□□□ 0.68
LSS-205ENST00000457828 RPGRQ92834 1020 aaKnown RBP19.32■□□□□ 0.68
LSS-205ENST00000457828 MCM5P33992 734 aa19.31■□□□□ 0.68
LSS-205ENST00000457828 TPD52L1Q16890 204 aaPredicted RBP19.31■□□□□ 0.68
LSS-205ENST00000457828 PRPF40BQ6NWY9 871 aaKnown RBP19.31■□□□□ 0.68
LSS-205ENST00000457828 TNMDQ9H2S6 317 aa19.31■□□□□ 0.68
LSS-205ENST00000457828 TMEM63CQ9P1W3 806 aa19.31■□□□□ 0.68
LSS-205ENST00000457828 CCNL1Q9UK58 526 aaPredicted RBP19.31■□□□□ 0.68
LSS-205ENST00000457828 GIMAP6Q6P9H5 292 aa19.31■□□□□ 0.68
LSS-205ENST00000457828 CNPY2Q9Y2B0 182 aa19.31■□□□□ 0.68
LSS-205ENST00000457828 TRPC5Q9UL62 973 aaPredicted RBP19.31■□□□□ 0.68
LSS-205ENST00000457828 PPP1R42Q7Z4L9 355 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 CERKQ8TCT0 537 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 NOL7Q9UMY1 257 aaKnown RBP19.3■□□□□ 0.68
LSS-205ENST00000457828 DZIP3Q86Y13 1208 aaKnown RBP19.3■□□□□ 0.68
LSS-205ENST00000457828 SETDB2Q96T68 719 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 ALKQ9UM73 1620 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 SPATA31A3Q5VYP0 1347 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 NIP7Q9Y221 180 aaKnown RBP eCLIP19.3■□□□□ 0.68
LSS-205ENST00000457828 ADGRL3Q9HAR2 1447 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 GNPATO15228 680 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 SYNE3Q6ZMZ3 975 aa19.3■□□□□ 0.68
LSS-205ENST00000457828 SPHKAPQ2M3C7 1700 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 PDCP20941 246 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 FAM182BQ5T319 152 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 PPRC1Q5VV67 1664 aaKnown RBP19.29■□□□□ 0.68
LSS-205ENST00000457828 STX6O43752 255 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 PSMA5P28066 241 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
LSS-205ENST00000457828 DYNC1I1O14576 645 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 SAMD1Q6SPF0 538 aaPredicted RBP19.29■□□□□ 0.68
LSS-205ENST00000457828 SIRT2Q8IXJ6 389 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 NUP62CLQ9H1M0 184 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 E9PCH4 1651 aa19.29■□□□□ 0.68
LSS-205ENST00000457828 TPM3P06753 285 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 G2E3Q7L622 706 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 ABCF2Q9UG63 623 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 TPM4P67936 248 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 HS1BP3Q53T59 392 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 CKAP2LQ8IYA6 745 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 WWC3Q9ULE0 1092 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 CAMSAP1Q5T5Y3 1602 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 ANKRD18BA2A2Z9 1011 aa19.28■□□□□ 0.68
LSS-205ENST00000457828 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.683e-6■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms