RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 IP6K1Q92551 441 aa11.5□□□□□ -0.57
LINC01888-202ENST00000457602 NECTIN2Q92692 538 aa11.5□□□□□ -0.57
LINC01888-202ENST00000457602 PDGFDQ9GZP0 370 aaPredicted RBP11.5□□□□□ -0.57
LINC01888-202ENST00000457602 AMPHP49418 695 aa11.49□□□□□ -0.57
LINC01888-202ENST00000457602 TRIM26Q12899 539 aaPredicted RBP11.49□□□□□ -0.57
LINC01888-202ENST00000457602 SLC15A2Q16348 729 aa11.49□□□□□ -0.57
LINC01888-202ENST00000457602 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
LINC01888-202ENST00000457602 TMF1P82094 1093 aa11.48□□□□□ -0.57
LINC01888-202ENST00000457602 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
LINC01888-202ENST00000457602 ANKRD36BQ8N2N9 1353 aa11.47□□□□□ -0.57
LINC01888-202ENST00000457602 MAP3K19Q56UN5 1328 aa11.47□□□□□ -0.57
LINC01888-202ENST00000457602 SLC10A3P09131 477 aa11.47□□□□□ -0.57
LINC01888-202ENST00000457602 FBLN1P23142 703 aa11.47□□□□□ -0.57
LINC01888-202ENST00000457602 HOXC9P31274 260 aa11.47□□□□□ -0.57
LINC01888-202ENST00000457602 TJAP1Q5JTD0 557 aa11.47□□□□□ -0.57
LINC01888-202ENST00000457602 YY1P25490 414 aa11.46□□□□□ -0.57
LINC01888-202ENST00000457602 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
LINC01888-202ENST00000457602 NLRP7Q8WX94 980 aa11.46□□□□□ -0.57
LINC01888-202ENST00000457602 GGNBP2Q9H3C7 697 aa11.46□□□□□ -0.57
LINC01888-202ENST00000457602 CASZ1Q86V15 1759 aa11.46□□□□□ -0.58
LINC01888-202ENST00000457602 USP47Q96K76 1375 aa11.45□□□□□ -0.58
LINC01888-202ENST00000457602 IRF6O14896 467 aa11.45□□□□□ -0.58
LINC01888-202ENST00000457602 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
LINC01888-202ENST00000457602 KCNC4Q03721 635 aa11.44□□□□□ -0.58
LINC01888-202ENST00000457602 RRS1Q15050 365 aaKnown RBP11.44□□□□□ -0.58
LINC01888-202ENST00000457602 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
LINC01888-202ENST00000457602 MTRQ99707 1265 aa11.44□□□□□ -0.58
LINC01888-202ENST00000457602 MTFR1LQ9H019 292 aa11.44□□□□□ -0.58
LINC01888-202ENST00000457602 FAM208AQ9UK61 1670 aaKnown RBP11.43□□□□□ -0.58
LINC01888-202ENST00000457602 FYB1O15117 783 aa11.43□□□□□ -0.58
LINC01888-202ENST00000457602 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
LINC01888-202ENST00000457602 DAXXQ9UER7 740 aaPredicted RBP11.43□□□□□ -0.58
LINC01888-202ENST00000457602 BTAF1O14981 1849 aa11.43□□□□□ -0.58
LINC01888-202ENST00000457602 KAT6BQ8WYB5 2073 aa11.43□□□□□ -0.58
LINC01888-202ENST00000457602 ZCRB1Q8TBF4 217 aaKnown RBP11.42□□□□□ -0.58
LINC01888-202ENST00000457602 CCDC102AQ96A19 550 aa11.42□□□□□ -0.58
LINC01888-202ENST00000457602 LRRC4BQ9NT99 713 aa11.42□□□□□ -0.58
LINC01888-202ENST00000457602 MYOM1P52179 1685 aa11.42□□□□□ -0.58
LINC01888-202ENST00000457602 SMG6Q86US8 1419 aaKnown RBP11.42□□□□□ -0.58
LINC01888-202ENST00000457602 RTL1A6NKG5 1358 aa11.41□□□□□ -0.58
LINC01888-202ENST00000457602 ZMYND10O75800 440 aa11.41□□□□□ -0.58
LINC01888-202ENST00000457602 ZNF827Q17R98 1081 aa11.41□□□□□ -0.58
LINC01888-202ENST00000457602 USHBP1Q8N6Y0 703 aa11.41□□□□□ -0.58
LINC01888-202ENST00000457602 RAPGEF4Q8WZA2 1011 aa11.41□□□□□ -0.58
LINC01888-202ENST00000457602 PRR14Q9BWN1 585 aa11.41□□□□□ -0.58
LINC01888-202ENST00000457602 FHDC1Q9C0D6 1143 aaPredicted RBP11.41□□□□□ -0.58
LINC01888-202ENST00000457602 CFHP08603 1231 aa11.4□□□□□ -0.58
LINC01888-202ENST00000457602 KCNQ4P56696 695 aa11.4□□□□□ -0.58
LINC01888-202ENST00000457602 SLC27A3Q5K4L6 730 aa11.4□□□□□ -0.58
LINC01888-202ENST00000457602 NBPF6Q5VWK0 638 aa11.4□□□□□ -0.58
LINC01888-202ENST00000457602 NBPF4Q96M43 638 aa11.4□□□□□ -0.58
LINC01888-202ENST00000457602 ARXQ96QS3 562 aa11.4□□□□□ -0.58
LINC01888-202ENST00000457602 IL21Q9HBE4 155 aa11.4□□□□□ -0.58
LINC01888-202ENST00000457602 MEGF6O75095 1541 aa11.4□□□□□ -0.59
LINC01888-202ENST00000457602 PAPPAQ13219 1627 aa11.39□□□□□ -0.59
LINC01888-202ENST00000457602 ACTN4O43707 911 aaKnown RBP11.39□□□□□ -0.59
LINC01888-202ENST00000457602 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
LINC01888-202ENST00000457602 HSP90AB2PQ58FF8 381 aa11.39□□□□□ -0.59
LINC01888-202ENST00000457602 SYT17Q9BSW7 474 aa11.39□□□□□ -0.59
LINC01888-202ENST00000457602 POLR3GLQ9BT43 218 aa11.39□□□□□ -0.59
LINC01888-202ENST00000457602 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
LINC01888-202ENST00000457602 TFCP2L1Q9NZI6 479 aa11.39□□□□□ -0.59
LINC01888-202ENST00000457602 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
LINC01888-202ENST00000457602 ZNF516Q92618 1163 aa11.38□□□□□ -0.59
LINC01888-202ENST00000457602 DOT1LQ8TEK3 1739 aa11.38□□□□□ -0.59
LINC01888-202ENST00000457602 CGNL1Q0VF96 1302 aa11.37□□□□□ -0.59
LINC01888-202ENST00000457602 NSD3Q9BZ95 1437 aa11.37□□□□□ -0.59
LINC01888-202ENST00000457602 PPM1GO15355 546 aaPredicted RBP11.37□□□□□ -0.59
LINC01888-202ENST00000457602 KMT5BQ4FZB7 885 aa11.37□□□□□ -0.59
LINC01888-202ENST00000457602 CARD14Q9BXL6 1004 aa11.37□□□□□ -0.59
LINC01888-202ENST00000457602 CCNL1Q9UK58 526 aaPredicted RBP11.37□□□□□ -0.59
LINC01888-202ENST00000457602 INSRP06213 1382 aa11.37□□□□□ -0.59
LINC01888-202ENST00000457602 FLT4P35916 1363 aa11.37□□□□□ -0.59
LINC01888-202ENST00000457602 KIF20BQ96Q89 1820 aa11.37□□□□□ -0.59
LINC01888-202ENST00000457602 POLD1P28340 1107 aa11.36□□□□□ -0.59
LINC01888-202ENST00000457602 SLC16A10Q8TF71 515 aa11.36□□□□□ -0.59
LINC01888-202ENST00000457602 TIMELESSQ9UNS1 1208 aa11.36□□□□□ -0.59
LINC01888-202ENST00000457602 NSD2O96028 1365 aa11.36□□□□□ -0.59
LINC01888-202ENST00000457602 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
LINC01888-202ENST00000457602 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
LINC01888-202ENST00000457602 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
LINC01888-202ENST00000457602 COPS2P61201 443 aa11.35□□□□□ -0.59
LINC01888-202ENST00000457602 PCDHB3Q9Y5E6 796 aa11.35□□□□□ -0.59
LINC01888-202ENST00000457602 EMILIN1Q9Y6C2 1016 aa11.35□□□□□ -0.59
LINC01888-202ENST00000457602 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
LINC01888-202ENST00000457602 KIF24Q5T7B8 1368 aa11.34□□□□□ -0.59
LINC01888-202ENST00000457602 BLOC1S3Q6QNY0 202 aa11.34□□□□□ -0.59
LINC01888-202ENST00000457602 DDX11L8A8MPP1 907 aa11.33□□□□□ -0.6
LINC01888-202ENST00000457602 GPR162Q16538 588 aa11.33□□□□□ -0.6
LINC01888-202ENST00000457602 MPRIPQ6WCQ1 1025 aa11.33□□□□□ -0.6
LINC01888-202ENST00000457602 SULF1Q8IWU6 871 aa11.33□□□□□ -0.6
LINC01888-202ENST00000457602 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
LINC01888-202ENST00000457602 MDM2Q00987 491 aaPredicted RBP11.32□□□□□ -0.6
LINC01888-202ENST00000457602 CLSPNQ9HAW4 1339 aa11.32□□□□□ -0.6
LINC01888-202ENST00000457602 LY75O60449 1722 aa11.32□□□□□ -0.6
LINC01888-202ENST00000457602 MAP3K5Q99683 1374 aa11.31□□□□□ -0.6
LINC01888-202ENST00000457602 CYP27B1O15528 508 aa11.31□□□□□ -0.6
LINC01888-202ENST00000457602 ZPR1O75312 459 aa11.31□□□□□ -0.6
LINC01888-202ENST00000457602 RGS20O76081 388 aa11.31□□□□□ -0.6
LINC01888-202ENST00000457602 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms