RNA–Protein interactions for RNA: ENST00000457286.5

SNX8-206, Transcript of sorting nexin 8, humanhuman

TSL 3

Gene SNX8, Length 686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-206ENST00000457286 CACNA1SQ13698 1873 aa18.44■□□□□ 0.54
SNX8-206ENST00000457286 FOXN1O15353 648 aa18.44■□□□□ 0.54
SNX8-206ENST00000457286 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
SNX8-206ENST00000457286 CAMTA2O94983 1202 aa18.43■□□□□ 0.54
SNX8-206ENST00000457286 ST5P78524 1137 aa18.43■□□□□ 0.54
SNX8-206ENST00000457286 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
SNX8-206ENST00000457286 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
SNX8-206ENST00000457286 TAF1DQ9H5J8 278 aaPredicted RBP18.43■□□□□ 0.54
SNX8-206ENST00000457286 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
SNX8-206ENST00000457286 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
SNX8-206ENST00000457286 NPHP1O15259 732 aa18.42■□□□□ 0.54
SNX8-206ENST00000457286 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
SNX8-206ENST00000457286 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
SNX8-206ENST00000457286 ITGBL1O95965 494 aaPredicted RBP18.41■□□□□ 0.54
SNX8-206ENST00000457286 A1BGP04217 495 aa18.41■□□□□ 0.54
SNX8-206ENST00000457286 CTCFP49711 727 aaPredicted RBP18.41■□□□□ 0.54
SNX8-206ENST00000457286 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
SNX8-206ENST00000457286 TMEM88BA6NKF7 163 aa18.4■□□□□ 0.54
SNX8-206ENST00000457286 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
SNX8-206ENST00000457286 VEGFBP49765 207 aa18.39■□□□□ 0.53
SNX8-206ENST00000457286 CCDC93Q567U6 631 aa18.39■□□□□ 0.53
SNX8-206ENST00000457286 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.53
SNX8-206ENST00000457286 AIDAQ96BJ3 306 aa18.39■□□□□ 0.53
SNX8-206ENST00000457286 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
SNX8-206ENST00000457286 KLRG2A4D1S0 409 aaPredicted RBP18.38■□□□□ 0.53
SNX8-206ENST00000457286 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
SNX8-206ENST00000457286 ADAMTSL1Q8N6G6 1762 aa18.37■□□□□ 0.53
SNX8-206ENST00000457286 RGL2O15211 777 aa18.37■□□□□ 0.53
SNX8-206ENST00000457286 NPR1P16066 1061 aa18.37■□□□□ 0.53
SNX8-206ENST00000457286 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX8-206ENST00000457286 NBPF5PQ86XG9 351 aaPredicted RBP18.37■□□□□ 0.53
SNX8-206ENST00000457286 WBP1LQ9NX94 342 aa18.37■□□□□ 0.53
SNX8-206ENST00000457286 HACL1Q9UJ83 578 aa18.37■□□□□ 0.53
SNX8-206ENST00000457286 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
SNX8-206ENST00000457286 PNMA8AQ86V59 439 aaPredicted RBP18.36■□□□□ 0.53
SNX8-206ENST00000457286 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
SNX8-206ENST00000457286 ZNF652Q9Y2D9 606 aa18.36■□□□□ 0.53
SNX8-206ENST00000457286 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
SNX8-206ENST00000457286 ZNF541Q9H0D2 1346 aa18.35■□□□□ 0.53
SNX8-206ENST00000457286 EAPPQ56P03 285 aaPredicted RBP18.35■□□□□ 0.53
SNX8-206ENST00000457286 RASSF10A6NK89 507 aa18.34■□□□□ 0.53
SNX8-206ENST00000457286 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
SNX8-206ENST00000457286 U2SURPO15042 1029 aaKnown RBP18.34■□□□□ 0.53
SNX8-206ENST00000457286 EPHX2P34913 555 aa18.34■□□□□ 0.53
SNX8-206ENST00000457286 TPTE2Q6XPS3 522 aa18.34■□□□□ 0.53
SNX8-206ENST00000457286 USP16Q9Y5T5 823 aa18.34■□□□□ 0.53
SNX8-206ENST00000457286 FZD9O00144 591 aa18.33■□□□□ 0.52
SNX8-206ENST00000457286 KCNQ3O43525 872 aa18.33■□□□□ 0.52
SNX8-206ENST00000457286 DEFB115Q30KQ5 88 aa18.33■□□□□ 0.52
SNX8-206ENST00000457286 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
SNX8-206ENST00000457286 ZNF277Q9NRM2 450 aaPredicted RBP18.33■□□□□ 0.52
SNX8-206ENST00000457286 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
SNX8-206ENST00000457286 LBX1P52954 281 aa18.32■□□□□ 0.52
SNX8-206ENST00000457286 CNTROBQ8N137 903 aa18.32■□□□□ 0.52
SNX8-206ENST00000457286 CLEC11AQ9Y240 323 aa18.32■□□□□ 0.52
SNX8-206ENST00000457286 SNRPA1P09661 255 aaKnown RBP18.31■□□□□ 0.52
SNX8-206ENST00000457286 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
SNX8-206ENST00000457286 MAP2K1Q02750 393 aaPredicted RBP18.31■□□□□ 0.52
SNX8-206ENST00000457286 GPC2Q8N158 579 aa18.31■□□□□ 0.52
SNX8-206ENST00000457286 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
SNX8-206ENST00000457286 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
SNX8-206ENST00000457286 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
SNX8-206ENST00000457286 NIP7Q9Y221 180 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNX8-206ENST00000457286 RNF123Q5XPI4 1314 aa18.29■□□□□ 0.52
SNX8-206ENST00000457286 HSPA8P11142 646 aaKnown RBP18.29■□□□□ 0.52
SNX8-206ENST00000457286 MAP1SQ66K74 1059 aaPredicted RBP18.29■□□□□ 0.52
SNX8-206ENST00000457286 OLFM4Q6UX06 510 aa18.29■□□□□ 0.52
SNX8-206ENST00000457286 PSMD1Q99460 953 aa18.29■□□□□ 0.52
SNX8-206ENST00000457286 SNED1Q8TER0 1413 aa18.29■□□□□ 0.52
SNX8-206ENST00000457286 WDR33Q9C0J8 1336 aaKnown RBP18.28■□□□□ 0.52
SNX8-206ENST00000457286 SYNE4Q8N205 404 aa18.28■□□□□ 0.52
SNX8-206ENST00000457286 ABHD8Q96I13 439 aa18.28■□□□□ 0.52
SNX8-206ENST00000457286 PRAMEF22A3QJZ6 481 aa18.27■□□□□ 0.52
SNX8-206ENST00000457286 NBPF26B4DH59 902 aa18.27■□□□□ 0.52
SNX8-206ENST00000457286 CRY2Q49AN0 593 aa18.27■□□□□ 0.52
SNX8-206ENST00000457286 CC2D2BQ6DHV5 1058 aa18.27■□□□□ 0.52
SNX8-206ENST00000457286 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.52
SNX8-206ENST00000457286 NBPF15Q8N660 670 aa18.27■□□□□ 0.52
SNX8-206ENST00000457286 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
SNX8-206ENST00000457286 SLC34A2O95436 690 aa18.26■□□□□ 0.51
SNX8-206ENST00000457286 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
SNX8-206ENST00000457286 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
SNX8-206ENST00000457286 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
SNX8-206ENST00000457286 ABT1Q9ULW3 272 aaKnown RBP18.26■□□□□ 0.51
SNX8-206ENST00000457286 THSD7BQ9C0I4 1608 aa18.26■□□□□ 0.51
SNX8-206ENST00000457286 GRIPAP1Q4V328 841 aa18.25■□□□□ 0.51
SNX8-206ENST00000457286 GTF2E1P29083 439 aaPredicted RBP18.24■□□□□ 0.51
SNX8-206ENST00000457286 RTF1Q92541 710 aaKnown RBP18.24■□□□□ 0.51
SNX8-206ENST00000457286 LMOD1P29536 600 aaPredicted RBP18.23■□□□□ 0.51
SNX8-206ENST00000457286 EIF6P56537 245 aaKnown RBP18.23■□□□□ 0.51
SNX8-206ENST00000457286 LTBP1Q14766 1721 aa18.23■□□□□ 0.51
SNX8-206ENST00000457286 FAM177BA6PVY3 158 aa18.22■□□□□ 0.51
SNX8-206ENST00000457286 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
SNX8-206ENST00000457286 HOXA10P31260 410 aaPredicted RBP18.22■□□□□ 0.51
SNX8-206ENST00000457286 ECE1P42892 770 aa18.22■□□□□ 0.51
SNX8-206ENST00000457286 HLFQ16534 295 aa18.22■□□□□ 0.51
SNX8-206ENST00000457286 CFAP53Q96M91 514 aa18.22■□□□□ 0.51
SNX8-206ENST00000457286 NYXQ9GZU5 481 aa18.22■□□□□ 0.51
SNX8-206ENST00000457286 COL4A5P29400 1685 aa18.22■□□□□ 0.51
SNX8-206ENST00000457286 TRPM7Q96QT4 1865 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms