RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 LIG1P18858 919 aa16.7■□□□□ 0.26
TOP3B-214ENST00000457270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
TOP3B-214ENST00000457270 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
TOP3B-214ENST00000457270 CCDC144BQ3MJ40 725 aa16.7■□□□□ 0.26
TOP3B-214ENST00000457270 CCDC144CPQ8IYA2 1237 aa16.7■□□□□ 0.26
TOP3B-214ENST00000457270 ERBB3P21860 1342 aa16.69■□□□□ 0.26
TOP3B-214ENST00000457270 HNRNPH2P55795 449 aaKnown RBP16.69■□□□□ 0.26
TOP3B-214ENST00000457270 BMS1Q14692 1282 aaKnown RBP16.69■□□□□ 0.26
TOP3B-214ENST00000457270 SARM1Q6SZW1 724 aa16.69■□□□□ 0.26
TOP3B-214ENST00000457270 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
TOP3B-214ENST00000457270 ZNF592Q92610 1267 aa16.69■□□□□ 0.26
TOP3B-214ENST00000457270 SLU7O95391 586 aaKnown RBP16.69■□□□□ 0.26
TOP3B-214ENST00000457270 LARGE1O95461 756 aa16.69■□□□□ 0.26
TOP3B-214ENST00000457270 VPS53Q5VIR6 699 aa16.69■□□□□ 0.26
TOP3B-214ENST00000457270 GNAI3P08754 354 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 ELF2Q15723 593 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 CAMK4Q16566 473 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 CHMP4CQ96CF2 233 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 NOL10Q9BSC4 688 aaKnown RBP16.68■□□□□ 0.26
TOP3B-214ENST00000457270 CLSTN2Q9H4D0 955 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 ZNF446Q9NWS9 450 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 ADGRL3Q9HAR2 1447 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
TOP3B-214ENST00000457270 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 H2AFXP16104 143 aaPredicted RBP16.68■□□□□ 0.26
TOP3B-214ENST00000457270 MRFAP1L1Q96HT8 127 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 EFCC1Q9HA90 598 aa16.68■□□□□ 0.26
TOP3B-214ENST00000457270 TTC21BQ7Z4L5 1316 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 ZNF165P49910 485 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 RAD51AP2Q09MP3 1159 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 ST7Q9NRC1 585 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 EDC4Q6P2E9 1401 aaKnown RBP16.67■□□□□ 0.26
TOP3B-214ENST00000457270 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 BRD2P25440 801 aaKnown RBP16.67■□□□□ 0.26
TOP3B-214ENST00000457270 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 SCAND2PQ9GZW5 306 aaPredicted RBP16.67■□□□□ 0.26
TOP3B-214ENST00000457270 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
TOP3B-214ENST00000457270 VPS37CA5D8V6 355 aaPredicted RBP16.66■□□□□ 0.26
TOP3B-214ENST00000457270 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
TOP3B-214ENST00000457270 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
TOP3B-214ENST00000457270 CRYBG1Q9Y4K1 1723 aa16.66■□□□□ 0.26
TOP3B-214ENST00000457270 CASTP20810 708 aaKnown RBP16.66■□□□□ 0.26
TOP3B-214ENST00000457270 LARP6Q9BRS8 491 aaKnown RBP16.66■□□□□ 0.26
TOP3B-214ENST00000457270 YY1AP1Q9H869 796 aa16.66■□□□□ 0.26
TOP3B-214ENST00000457270 F6X3S4 739 aa16.65■□□□□ 0.26
TOP3B-214ENST00000457270 RSPH14Q9UHP6 348 aa16.65■□□□□ 0.26
TOP3B-214ENST00000457270 CHD2O14647 1828 aaKnown RBP16.65■□□□□ 0.26
TOP3B-214ENST00000457270 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
TOP3B-214ENST00000457270 G2E3Q7L622 706 aa16.65■□□□□ 0.26
TOP3B-214ENST00000457270 CRB1P82279 1406 aa16.65■□□□□ 0.26
TOP3B-214ENST00000457270 KCNB2Q92953 911 aa16.65■□□□□ 0.26
TOP3B-214ENST00000457270 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
TOP3B-214ENST00000457270 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.65■□□□□ 0.26
TOP3B-214ENST00000457270 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.65■□□□□ 0.26
TOP3B-214ENST00000457270 V9GYY5 206 aaPredicted RBP16.65■□□□□ 0.26
TOP3B-214ENST00000457270 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
TOP3B-214ENST00000457270 HTATSF1O43719 755 aaKnown RBP16.64■□□□□ 0.25
TOP3B-214ENST00000457270 SKILP12757 684 aa16.64■□□□□ 0.25
TOP3B-214ENST00000457270 CCAR2Q8N163 923 aaKnown RBP16.64■□□□□ 0.25
TOP3B-214ENST00000457270 PI4K2BQ8TCG2 481 aa16.64■□□□□ 0.25
TOP3B-214ENST00000457270 L2HGDHQ9H9P8 463 aa16.64■□□□□ 0.25
TOP3B-214ENST00000457270 ZSWIM6Q9HCJ5 1215 aa16.64■□□□□ 0.25
TOP3B-214ENST00000457270 FHOD1Q9Y613 1164 aa16.64■□□□□ 0.25
TOP3B-214ENST00000457270 GEMIN8Q9NWZ8 242 aaKnown RBP16.64■□□□□ 0.25
TOP3B-214ENST00000457270 SETD1AO15047 1707 aaKnown RBP16.63■□□□□ 0.25
TOP3B-214ENST00000457270 XRN1Q8IZH2 1706 aaKnown RBP16.63■□□□□ 0.25
TOP3B-214ENST00000457270 PDCP20941 246 aa16.63■□□□□ 0.25
TOP3B-214ENST00000457270 DNAJC25Q9H1X3 360 aa16.63■□□□□ 0.25
TOP3B-214ENST00000457270 CCZ1BP86790 482 aa16.63■□□□□ 0.25
TOP3B-214ENST00000457270 CCZ1P86791 482 aaPredicted RBP16.63■□□□□ 0.25
TOP3B-214ENST00000457270 IQCB1Q15051 598 aa16.63■□□□□ 0.25
TOP3B-214ENST00000457270 LARP1BQ659C4 914 aaKnown RBP16.63■□□□□ 0.25
TOP3B-214ENST00000457270 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
TOP3B-214ENST00000457270 ITSN1Q15811 1721 aa16.63■□□□□ 0.25
TOP3B-214ENST00000457270 DLC1Q96QB1 1528 aa16.63■□□□□ 0.25
TOP3B-214ENST00000457270 GOLGA6L4A6NEF3 574 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 GGT6Q6P531 493 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 CHMP3Q9Y3E7 222 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 CPA1P15085 419 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 ME3Q16798 604 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 CDC37L1Q7L3B6 337 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 MCM10Q7L590 875 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 RASSF4Q9H2L5 321 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 HDAC5Q9UQL6 1122 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 CYP46A1Q9Y6A2 500 aa16.62■□□□□ 0.25
TOP3B-214ENST00000457270 SPATA32Q96LK8 384 aa16.61■□□□□ 0.25
TOP3B-214ENST00000457270 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
TOP3B-214ENST00000457270 SOX12O15370 315 aa16.61■□□□□ 0.25
TOP3B-214ENST00000457270 MUM1L1Q5H9M0 696 aa16.61■□□□□ 0.25
TOP3B-214ENST00000457270 LEO1Q8WVC0 666 aaPredicted RBP16.61■□□□□ 0.25
TOP3B-214ENST00000457270 MLH3Q9UHC1 1453 aa16.6■□□□□ 0.25
TOP3B-214ENST00000457270 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
TOP3B-214ENST00000457270 GOLGA6L19H0YKK7 550 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms