RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ME3Q16798 604 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 TYRO3Q06418 890 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 INTS3Q68E01 1043 aaKnown RBP5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 NKX2-3Q8TAU0 364 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 MED15Q96RN5 788 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 OSBPL3Q9H4L5 887 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 PLEKHA4Q9H4M7 779 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 ANKRD36BQ8N2N9 1353 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 TTC37Q6PGP7 1564 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 DLG5Q8TDM6 1919 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 CWC27Q6UX04 472 aaKnown RBP5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 TIGD1Q96MW7 591 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 CLIC6Q96NY7 704 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 SBNO2Q9Y2G9 1366 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 KIF3BO15066 747 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 NBPF7P0C2Y1 421 aaPredicted RBP5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 MMP14P50281 582 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 TWISTNBQ3B726 338 aaPredicted RBP5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 LRRC8AQ8IWT6 810 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 ATP1A3P13637 1013 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 ANO6Q4KMQ2 910 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 MCM10Q7L590 875 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 EDC3Q96F86 508 aaKnown RBP5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 CWC22Q9HCG8 908 aaKnown RBP5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 TPCN1Q9ULQ1 816 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 TULP4Q9NRJ4 1543 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 JAK2O60674 1132 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 INHBEP58166 350 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 ARMCX5Q6P1M9 558 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 SNX14Q9Y5W7 946 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 ABCA6Q8N139 1617 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 STX6O43752 255 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 CHADLQ6NUI6 762 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 KRT222Q8N1A0 295 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 IL17RAQ96F46 866 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 ADAMTS12P58397 1594 aa5.43□□□□□ -1.54
DEPDC1-202ENST00000456315 PRUNE2Q8WUY3 3088 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 COL15A1P39059 1388 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 HSPA4P34932 840 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 CCDC83Q8IWF9 413 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 DPF2Q92785 391 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 FAM212AQ96EL1 285 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 WDR24Q96S15 920 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 HYPKQ9NX55 129 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 ADAM21Q9UKJ8 722 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 ERC2O15083 957 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 ZSCAN22P10073 491 aaPredicted RBP5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 ZNF75DP51815 510 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 CCDC183Q5T5S1 534 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 RBM43Q6ZSC3 357 aaKnown RBP5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 PI4K2BQ8TCG2 481 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 INTS4Q96HW7 963 aaKnown RBP5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 IFT57Q9NWB7 429 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 SMTNL1A8MU46 457 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 F13A1P00488 732 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 ZNF165P49910 485 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 UBE2HP62256 183 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 FUT8Q9BYC5 575 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 NDUFB9Q9Y6M9 179 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 CCDC189A1A4V9 331 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 FOXP4Q8IVH2 680 aaPredicted RBP5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 CCAR2Q8N163 923 aaKnown RBP5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 USP44Q9H0E7 712 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 INTS13Q9NVM9 706 aa5.42□□□□□ -1.54
DEPDC1-202ENST00000456315 LAMA1P25391 3075 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 TMEM139Q8IV31 216 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 FAM200AQ8TCP9 573 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 ZC3H4Q9UPT8 1303 aaKnown RBP5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 UNC13BO14795 1591 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 NCAPHQ15003 741 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 RRS1Q15050 365 aaKnown RBP5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 ALDH1L2Q3SY69 923 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 RIN2Q8WYP3 895 aaPredicted RBP5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 FRYLO94915 3013 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 SKILP12757 684 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 CEBPAP49715 358 aaPredicted RBP5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 KCNV1Q6PIU1 500 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 ILDR1Q86SU0 546 aaPredicted RBP5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 SEC62Q99442 399 aaKnown RBP5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 IQGAP3Q86VI3 1631 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 CARMIL2Q6F5E8 1435 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 SPHKAPQ2M3C7 1700 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 ECM2O94769 699 aaPredicted RBP5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 ARHGAP29Q52LW3 1261 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 NUTM1Q86Y26 1132 aa5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 LSG1Q9H089 658 aaKnown RBP5.41□□□□□ -1.54
DEPDC1-202ENST00000456315 BMP6P22004 513 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 GNAI1P63096 354 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 SNW1Q13573 536 aaKnown RBP5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 ARHGAP45Q92619 1136 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 GOLPH3LQ9H4A5 285 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 RAD50Q92878 1312 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 SGSM2O43147 1006 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 TADA3O75528 432 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 IDI1Q13907 227 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 FAM184AQ8NB25 1140 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 NECTIN2Q92692 538 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 RILPL2Q969X0 211 aa5.4□□□□□ -1.54
DEPDC1-202ENST00000456315 STK26Q9P289 416 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms