RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 MSL1Q68DK7 614 aa24.01■■□□□ 1.43
SBDSP1-205ENST00000456312 XAGE3Q8WTP9 111 aa24.01■■□□□ 1.43
SBDSP1-205ENST00000456312 ATF5Q9Y2D1 282 aaPredicted RBP24.01■■□□□ 1.43
SBDSP1-205ENST00000456312 KIAA1551Q9HCM1 1747 aa24.01■■□□□ 1.43
SBDSP1-205ENST00000456312 ERVV-1B6SEH8 477 aa24■■□□□ 1.43
SBDSP1-205ENST00000456312 ZPR1O75312 459 aa24■■□□□ 1.43
SBDSP1-205ENST00000456312 CT47B1P0C2W7 299 aaPredicted RBP24■■□□□ 1.43
SBDSP1-205ENST00000456312 COPS6Q7L5N1 327 aa24■■□□□ 1.43
SBDSP1-205ENST00000456312 NLGN1Q8N2Q7 840 aa24■■□□□ 1.43
SBDSP1-205ENST00000456312 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
SBDSP1-205ENST00000456312 SPON1Q9HCB6 807 aa24■■□□□ 1.43
SBDSP1-205ENST00000456312 N4BP2Q86UW6 1770 aaPredicted RBP24■■□□□ 1.43
SBDSP1-205ENST00000456312 ATP10DQ9P241 1426 aa24■■□□□ 1.43
SBDSP1-205ENST00000456312 ANKRD31Q8N7Z5 1873 aa23.99■■□□□ 1.43
SBDSP1-205ENST00000456312 TCERG1O14776 1098 aaKnown RBP23.99■■□□□ 1.43
SBDSP1-205ENST00000456312 TM4SF1P30408 202 aa23.99■■□□□ 1.43
SBDSP1-205ENST00000456312 HLFQ16534 295 aa23.99■■□□□ 1.43
SBDSP1-205ENST00000456312 CLEC4GQ6UXB4 293 aa23.99■■□□□ 1.43
SBDSP1-205ENST00000456312 ZNF428Q96B54 188 aa23.99■■□□□ 1.43
SBDSP1-205ENST00000456312 G2E3Q7L622 706 aa23.98■■□□□ 1.43
SBDSP1-205ENST00000456312 DDR1Q08345 913 aa23.97■■□□□ 1.43
SBDSP1-205ENST00000456312 NFIXQ14938 502 aa23.96■■□□□ 1.43
SBDSP1-205ENST00000456312 TBC1D9BQ66K14 1250 aa23.96■■□□□ 1.43
SBDSP1-205ENST00000456312 SLC4A2P04920 1241 aa23.95■■□□□ 1.42
SBDSP1-205ENST00000456312 GIGYF2Q6Y7W6 1299 aaKnown RBP23.95■■□□□ 1.42
SBDSP1-205ENST00000456312 NPM2Q86SE8 214 aaKnown RBP23.95■■□□□ 1.42
SBDSP1-205ENST00000456312 STK31Q9BXU1 1019 aa23.95■■□□□ 1.42
SBDSP1-205ENST00000456312 ADCY9O60503 1353 aa23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 POLRMTO00411 1230 aaKnown RBP23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 MMP10P09238 476 aa23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 AIMP1Q12904 312 aaKnown RBP23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 KIF6Q6ZMV9 814 aa23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 PLBD2Q8NHP8 589 aa23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 SSH1Q8WYL5 1049 aa23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 ZBTB3Q9H5J0 574 aa23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 BRCA1P38398 1863 aaKnown RBP23.94■■□□□ 1.42
SBDSP1-205ENST00000456312 ALDH1L2Q3SY69 923 aa23.93■■□□□ 1.42
SBDSP1-205ENST00000456312 MRPL50Q8N5N7 158 aaKnown RBP23.93■■□□□ 1.42
SBDSP1-205ENST00000456312 BRPF1P55201 1214 aaPredicted RBP23.92■■□□□ 1.42
SBDSP1-205ENST00000456312 FLIIQ13045 1269 aa23.92■■□□□ 1.42
SBDSP1-205ENST00000456312 DLEC1Q9Y238 1755 aa23.92■■□□□ 1.42
SBDSP1-205ENST00000456312 C10orf71Q711Q0 1435 aa23.92■■□□□ 1.42
SBDSP1-205ENST00000456312 LAMB2P55268 1798 aa23.91■■□□□ 1.42
SBDSP1-205ENST00000456312 UBN2Q6ZU65 1347 aa23.91■■□□□ 1.42
SBDSP1-205ENST00000456312 ANKRD13DQ6ZTN6 518 aa23.91■■□□□ 1.42
SBDSP1-205ENST00000456312 ZNF34Q8IZ26 560 aa23.91■■□□□ 1.42
SBDSP1-205ENST00000456312 ZNF652Q9Y2D9 606 aa23.91■■□□□ 1.42
SBDSP1-205ENST00000456312 RARSP54136 660 aaKnown RBP23.9■■□□□ 1.42
SBDSP1-205ENST00000456312 ARXQ96QS3 562 aa23.9■■□□□ 1.42
SBDSP1-205ENST00000456312 DDX60Q8IY21 1712 aaKnown RBP23.9■■□□□ 1.42
SBDSP1-205ENST00000456312 CARMIL3Q8ND23 1372 aa23.9■■□□□ 1.42
SBDSP1-205ENST00000456312 POLD1P28340 1107 aa23.89■■□□□ 1.41
SBDSP1-205ENST00000456312 COL11A2P13942 1736 aaPredicted RBP23.88■■□□□ 1.41
SBDSP1-205ENST00000456312 YTHDC1Q96MU7 727 aaKnown RBP23.88■■□□□ 1.41
SBDSP1-205ENST00000456312 TNRC6CQ9HCJ0 1690 aaKnown RBP23.88■■□□□ 1.41
SBDSP1-205ENST00000456312 IBTKQ9P2D0 1353 aaPredicted RBP23.88■■□□□ 1.41
SBDSP1-205ENST00000456312 TCIRG1Q13488 830 aa23.87■■□□□ 1.41
SBDSP1-205ENST00000456312 KSR2Q6VAB6 950 aa23.87■■□□□ 1.41
SBDSP1-205ENST00000456312 ISCA1Q9BUE6 129 aa23.87■■□□□ 1.41
SBDSP1-205ENST00000456312 PI4KAP2A4QPH2 592 aa23.86■■□□□ 1.41
SBDSP1-205ENST00000456312 BICDL1Q6ZP65 573 aa23.86■■□□□ 1.41
SBDSP1-205ENST00000456312 PI4KAP1Q8N8J0 262 aa23.86■■□□□ 1.41
SBDSP1-205ENST00000456312 BCL2L13Q9BXK5 485 aa23.86■■□□□ 1.41
SBDSP1-205ENST00000456312 NIP7Q9Y221 180 aaKnown RBP eCLIP23.86■■□□□ 1.41
SBDSP1-205ENST00000456312 SERPINB2P05120 415 aa23.85■■□□□ 1.41
SBDSP1-205ENST00000456312 HSP90AB3PQ58FF7 597 aa23.85■■□□□ 1.41
SBDSP1-205ENST00000456312 SETDB2Q96T68 719 aa23.85■■□□□ 1.41
SBDSP1-205ENST00000456312 METTL22Q9BUU2 404 aaPredicted RBP23.85■■□□□ 1.41
SBDSP1-205ENST00000456312 PARP3Q9Y6F1 533 aa23.85■■□□□ 1.41
SBDSP1-205ENST00000456312 DDX58O95786 925 aaKnown RBP23.84■■□□□ 1.41
SBDSP1-205ENST00000456312 TRIM28Q13263 835 aaKnown RBP23.84■■□□□ 1.41
SBDSP1-205ENST00000456312 MAP3K2Q9Y2U5 619 aa23.84■■□□□ 1.41
SBDSP1-205ENST00000456312 MYH3P11055 1940 aa23.84■■□□□ 1.41
SBDSP1-205ENST00000456312 RIC3Q7Z5B4 369 aa23.83■■□□□ 1.41
SBDSP1-205ENST00000456312 SMC4Q9NTJ3 1288 aa23.83■■□□□ 1.41
SBDSP1-205ENST00000456312 PXDNLA1KZ92 1463 aa23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 NTSR2O95665 410 aa23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 GPTP24298 496 aa23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 FKBP5Q13451 457 aaPredicted RBP23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 SUSD4Q5VX71 490 aa23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 PRR5LQ6MZQ0 368 aa23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 NLRP10Q86W26 655 aa23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 RIC1Q4ADV7 1423 aa23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 PTPRCP08575 1304 aa23.82■■□□□ 1.4
SBDSP1-205ENST00000456312 IGKV5-2P06315 115 aa23.81■■□□□ 1.4
SBDSP1-205ENST00000456312 PARP10Q53GL7 1025 aa23.81■■□□□ 1.4
SBDSP1-205ENST00000456312 DNAAF4Q8WXU2 420 aa23.81■■□□□ 1.4
SBDSP1-205ENST00000456312 BCAR3O75815 825 aa23.8■■□□□ 1.4
SBDSP1-205ENST00000456312 CACNA1SQ13698 1873 aa23.8■■□□□ 1.4
SBDSP1-205ENST00000456312 ABCC12Q96J65 1359 aa23.79■■□□□ 1.4
SBDSP1-205ENST00000456312 F6X3S4 739 aa23.79■■□□□ 1.4
SBDSP1-205ENST00000456312 FHDC1Q9C0D6 1143 aaPredicted RBP23.79■■□□□ 1.4
SBDSP1-205ENST00000456312 CD2APQ9Y5K6 639 aa23.79■■□□□ 1.4
SBDSP1-205ENST00000456312 ATP5J2-PTCD1G3V325 749 aa23.78■■□□□ 1.4
SBDSP1-205ENST00000456312 MYD88Q99836 296 aa23.78■■□□□ 1.4
SBDSP1-205ENST00000456312 RNF123Q5XPI4 1314 aa23.77■■□□□ 1.4
SBDSP1-205ENST00000456312 KIF16BQ96L93 1317 aa23.77■■□□□ 1.4
SBDSP1-205ENST00000456312 ARFGEF1Q9Y6D6 1849 aa23.77■■□□□ 1.4
SBDSP1-205ENST00000456312 BEND3Q5T5X7 828 aa23.76■■□□□ 1.39
SBDSP1-205ENST00000456312 NBPF5PQ86XG9 351 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms