RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 PTCD1O75127 700 aaKnown RBP9.35□□□□□ -0.91
ERCC3-204ENST00000456257 RAB11FIP3O75154 756 aa9.35□□□□□ -0.91
ERCC3-204ENST00000456257 ANKRD45Q5TZF3 282 aa9.35□□□□□ -0.91
ERCC3-204ENST00000456257 SMARCC1Q92922 1105 aaPredicted RBP9.35□□□□□ -0.91
ERCC3-204ENST00000456257 C8orf37Q96NL8 207 aa9.35□□□□□ -0.91
ERCC3-204ENST00000456257 ISCA1Q9BUE6 129 aa9.35□□□□□ -0.91
ERCC3-204ENST00000456257 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.35□□□□□ -0.91
ERCC3-204ENST00000456257 OSBPL3Q9H4L5 887 aa9.35□□□□□ -0.91
ERCC3-204ENST00000456257 LRRFIP2Q9Y608 721 aaKnown RBP9.35□□□□□ -0.91
ERCC3-204ENST00000456257 WNK3Q9BYP7 1800 aa9.35□□□□□ -0.91
ERCC3-204ENST00000456257 ERVV-1B6SEH8 477 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 MYL6BP14649 208 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 NEXNQ0ZGT2 675 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 RABL6Q3YEC7 729 aaPredicted RBP9.34□□□□□ -0.91
ERCC3-204ENST00000456257 BMP2KLQ5H9B9 411 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 ILDR2Q71H61 639 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 RIC3Q7Z5B4 369 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 PLEKHM2Q8IWE5 1019 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 DNAJC10Q8IXB1 793 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 CCDC191Q8NCU4 936 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 C5P01031 1676 aa9.34□□□□□ -0.91
ERCC3-204ENST00000456257 SALL3Q9BXA9 1300 aa9.33□□□□□ -0.92
ERCC3-204ENST00000456257 IL6STP40189 918 aaPredicted RBP9.33□□□□□ -0.92
ERCC3-204ENST00000456257 TCIRG1Q13488 830 aa9.33□□□□□ -0.92
ERCC3-204ENST00000456257 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
ERCC3-204ENST00000456257 CWF19L2Q2TBE0 894 aaKnown RBP9.33□□□□□ -0.92
ERCC3-204ENST00000456257 INTS5Q6P9B9 1019 aaKnown RBP9.33□□□□□ -0.92
ERCC3-204ENST00000456257 PPP1R42Q7Z4L9 355 aa9.33□□□□□ -0.92
ERCC3-204ENST00000456257 STAP2Q9UGK3 403 aa9.33□□□□□ -0.92
ERCC3-204ENST00000456257 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
ERCC3-204ENST00000456257 ITGB4P16144 1822 aa9.33□□□□□ -0.92
ERCC3-204ENST00000456257 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
ERCC3-204ENST00000456257 CICQ96RK0 1608 aaPredicted RBP9.32□□□□□ -0.92
ERCC3-204ENST00000456257 LOC102724428A0A0B4J2F2 783 aa9.32□□□□□ -0.92
ERCC3-204ENST00000456257 RGS3P49796 1198 aa9.32□□□□□ -0.92
ERCC3-204ENST00000456257 EIF5P55010 431 aaKnown RBP9.32□□□□□ -0.92
ERCC3-204ENST00000456257 SIK1P57059 783 aa9.32□□□□□ -0.92
ERCC3-204ENST00000456257 AIMP1Q12904 312 aaKnown RBP9.32□□□□□ -0.92
ERCC3-204ENST00000456257 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
ERCC3-204ENST00000456257 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
ERCC3-204ENST00000456257 TTLL7Q6ZT98 887 aa9.32□□□□□ -0.92
ERCC3-204ENST00000456257 LNPKQ9C0E8 428 aa9.32□□□□□ -0.92
ERCC3-204ENST00000456257 C9orf78Q9NZ63 289 aaPredicted RBP9.32□□□□□ -0.92
ERCC3-204ENST00000456257 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
ERCC3-204ENST00000456257 LAMB4A4D0S4 1761 aa9.32□□□□□ -0.92
ERCC3-204ENST00000456257 AFF2P51816 1311 aa9.31□□□□□ -0.92
ERCC3-204ENST00000456257 HSP90AB4PQ58FF6 505 aa9.31□□□□□ -0.92
ERCC3-204ENST00000456257 PLA2G12BQ9BX93 195 aa9.31□□□□□ -0.92
ERCC3-204ENST00000456257 CCDC9Q9Y3X0 531 aaKnown RBP9.31□□□□□ -0.92
ERCC3-204ENST00000456257 MAP3K15Q6ZN16 1313 aa9.31□□□□□ -0.92
ERCC3-204ENST00000456257 KCNQ2O43526 872 aa9.3□□□□□ -0.92
ERCC3-204ENST00000456257 RFX5P48382 616 aaPredicted RBP9.3□□□□□ -0.92
ERCC3-204ENST00000456257 FOXO4P98177 505 aa9.3□□□□□ -0.92
ERCC3-204ENST00000456257 SUCLG2Q96I99 432 aa9.3□□□□□ -0.92
ERCC3-204ENST00000456257 MYD88Q99836 296 aa9.3□□□□□ -0.92
ERCC3-204ENST00000456257 RBM42Q9BTD8 480 aaKnown RBP9.3□□□□□ -0.92
ERCC3-204ENST00000456257 QTRT2Q9H974 415 aaKnown RBP9.3□□□□□ -0.92
ERCC3-204ENST00000456257 AOX1Q06278 1338 aa9.3□□□□□ -0.92
ERCC3-204ENST00000456257 USP42Q9H9J4 1324 aaKnown RBP9.3□□□□□ -0.92
ERCC3-204ENST00000456257 CSF1RP07333 972 aa9.29□□□□□ -0.92
ERCC3-204ENST00000456257 PIP4K2AP48426 406 aaPredicted RBP9.29□□□□□ -0.92
ERCC3-204ENST00000456257 ITPK1Q13572 414 aa9.29□□□□□ -0.92
ERCC3-204ENST00000456257 EPHA10Q5JZY3 1008 aa9.29□□□□□ -0.92
ERCC3-204ENST00000456257 C16orf71Q8IYS4 520 aaPredicted RBP9.29□□□□□ -0.92
ERCC3-204ENST00000456257 KIF1BPQ96EK5 621 aa9.29□□□□□ -0.92
ERCC3-204ENST00000456257 LRRCC1Q9C099 1032 aa9.29□□□□□ -0.92
ERCC3-204ENST00000456257 COPRSQ9NQ92 184 aa9.29□□□□□ -0.92
ERCC3-204ENST00000456257 CCDC87Q9NVE4 849 aa9.29□□□□□ -0.92
ERCC3-204ENST00000456257 CWC25Q9NXE8 425 aaPredicted RBP9.29□□□□□ -0.92
ERCC3-204ENST00000456257 A0A087WZG4 1122 aa9.28□□□□□ -0.92
ERCC3-204ENST00000456257 SRGAP3O43295 1099 aa9.28□□□□□ -0.92
ERCC3-204ENST00000456257 PCCAP05165 728 aaPredicted RBP9.28□□□□□ -0.92
ERCC3-204ENST00000456257 PDE1AP54750 535 aa9.28□□□□□ -0.92
ERCC3-204ENST00000456257 HSP90AB3PQ58FF7 597 aa9.28□□□□□ -0.92
ERCC3-204ENST00000456257 CLEC4GQ6UXB4 293 aa9.28□□□□□ -0.92
ERCC3-204ENST00000456257 SEPT12Q8IYM1 358 aa9.28□□□□□ -0.92
ERCC3-204ENST00000456257 ZNF34Q8IZ26 560 aa9.28□□□□□ -0.92
ERCC3-204ENST00000456257 BICC1Q9H694 974 aaKnown RBP9.28□□□□□ -0.92
ERCC3-204ENST00000456257 RREB1Q92766 1687 aa9.28□□□□□ -0.92
ERCC3-204ENST00000456257 PALLDQ8WX93 1383 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 SURF6O75683 361 aaKnown RBP9.27□□□□□ -0.93
ERCC3-204ENST00000456257 CRKLP46109 303 aaKnown RBP9.27□□□□□ -0.93
ERCC3-204ENST00000456257 TTC22Q5TAA0 569 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 ERC1Q8IUD2 1116 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 ZBTB38Q8NAP3 1195 aaPredicted RBP9.27□□□□□ -0.93
ERCC3-204ENST00000456257 RHPN1Q8TCX5 695 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 ACSBG1Q96GR2 724 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 AK7Q96M32 723 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 BCL11BQ9C0K0 894 aaPredicted RBP9.27□□□□□ -0.93
ERCC3-204ENST00000456257 FBXO3Q9UK99 471 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 EXOC6BQ9Y2D4 811 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 ZBTB1Q9Y2K1 713 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 CDHR2Q9BYE9 1310 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
ERCC3-204ENST00000456257 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
ERCC3-204ENST00000456257 EIF5BO60841 1220 aaKnown RBP9.26□□□□□ -0.93
ERCC3-204ENST00000456257 SASH1O94885 1247 aa9.26□□□□□ -0.93
ERCC3-204ENST00000456257 CAMTA2O94983 1202 aa9.26□□□□□ -0.93
ERCC3-204ENST00000456257 SEC24BO95487 1268 aa9.26□□□□□ -0.93
ERCC3-204ENST00000456257 GSPT1P15170 499 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms