RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 ZSCAN31Q96LW9 406 aaPredicted RBP15.44■□□□□ 0.06
LINC00473-202ENST00000455853 LIMCH1Q9UPQ0 1083 aa15.44■□□□□ 0.06
LINC00473-202ENST00000455853 LRRFIP2Q9Y608 721 aaKnown RBP15.44■□□□□ 0.06
LINC00473-202ENST00000455853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00473-202ENST00000455853 RNF214Q8ND24 703 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 MYRIPQ8NFW9 859 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 RUFY2Q8WXA3 655 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 TTC14Q96N46 770 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 FAM13BQ9NYF5 915 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 TTC41PQ6P2S7 1318 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 ADAMTS2O95450 1211 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 HOXB7P09629 217 aa15.43■□□□□ 0.06
LINC00473-202ENST00000455853 SH2B1Q9NRF2 756 aaPredicted RBP15.43■□□□□ 0.06
LINC00473-202ENST00000455853 STX6O43752 255 aa15.42■□□□□ 0.06
LINC00473-202ENST00000455853 AMPHP49418 695 aa15.42■□□□□ 0.06
LINC00473-202ENST00000455853 KRT28Q7Z3Y7 464 aa15.42■□□□□ 0.06
LINC00473-202ENST00000455853 C8orf37Q96NL8 207 aa15.42■□□□□ 0.06
LINC00473-202ENST00000455853 USP44Q9H0E7 712 aa15.42■□□□□ 0.06
LINC00473-202ENST00000455853 MIS18AQ9NYP9 233 aa15.42■□□□□ 0.06
LINC00473-202ENST00000455853 HDAC5Q9UQL6 1122 aa15.42■□□□□ 0.06
LINC00473-202ENST00000455853 GTF2F1P35269 517 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC00473-202ENST00000455853 TAF7Q15545 349 aaPredicted RBP15.41■□□□□ 0.06
LINC00473-202ENST00000455853 EYA1Q99502 592 aa15.41■□□□□ 0.06
LINC00473-202ENST00000455853 UPF3BQ9BZI7 483 aaKnown RBP15.41■□□□□ 0.06
LINC00473-202ENST00000455853 TM6SF1Q9BZW5 370 aa15.41■□□□□ 0.06
LINC00473-202ENST00000455853 SMC3Q9UQE7 1217 aa15.41■□□□□ 0.06
LINC00473-202ENST00000455853 SNX14Q9Y5W7 946 aa15.41■□□□□ 0.06
LINC00473-202ENST00000455853 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
LINC00473-202ENST00000455853 AFF2P51816 1311 aa15.41■□□□□ 0.06
LINC00473-202ENST00000455853 GADD45BO75293 160 aaPredicted RBP15.4■□□□□ 0.06
LINC00473-202ENST00000455853 F13A1P00488 732 aa15.4■□□□□ 0.06
LINC00473-202ENST00000455853 RBM10P98175 930 aaKnown RBP15.4■□□□□ 0.06
LINC00473-202ENST00000455853 TSHZ3Q63HK5 1081 aa15.4■□□□□ 0.06
LINC00473-202ENST00000455853 PI4K2BQ8TCG2 481 aa15.4■□□□□ 0.06
LINC00473-202ENST00000455853 RHPN1Q8TCX5 695 aa15.4■□□□□ 0.06
LINC00473-202ENST00000455853 LSG1Q9H089 658 aaKnown RBP15.4■□□□□ 0.06
LINC00473-202ENST00000455853 ZNF772Q68DY9 489 aaPredicted RBP15.4■□□□□ 0.06
LINC00473-202ENST00000455853 SPTLC3Q9NUV7 552 aa15.4■□□□□ 0.06
LINC00473-202ENST00000455853 ANKARQ7Z5J8 1434 aa15.4■□□□□ 0.06
LINC00473-202ENST00000455853 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
LINC00473-202ENST00000455853 GLRX3O76003 335 aaKnown RBP15.39■□□□□ 0.05
LINC00473-202ENST00000455853 NOL8Q76FK4 1167 aaKnown RBP15.39■□□□□ 0.05
LINC00473-202ENST00000455853 UNC5CLQ8IV45 518 aa15.39■□□□□ 0.05
LINC00473-202ENST00000455853 SMAP1Q8IYB5 467 aaPredicted RBP15.39■□□□□ 0.05
LINC00473-202ENST00000455853 CHAMP1Q96JM3 812 aa15.39■□□□□ 0.05
LINC00473-202ENST00000455853 SPATA31A3Q5VYP0 1347 aa15.39■□□□□ 0.05
LINC00473-202ENST00000455853 KDM3BQ7LBC6 1761 aa15.39■□□□□ 0.05
LINC00473-202ENST00000455853 KDM4AO75164 1064 aa15.38■□□□□ 0.05
LINC00473-202ENST00000455853 SURF6O75683 361 aaKnown RBP15.38■□□□□ 0.05
LINC00473-202ENST00000455853 NOLC1Q14978 699 aaKnown RBP eCLIP15.38■□□□□ 0.05
LINC00473-202ENST00000455853 DNTTIP2Q5QJE6 756 aaKnown RBP15.38■□□□□ 0.05
LINC00473-202ENST00000455853 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
LINC00473-202ENST00000455853 KCNB2Q92953 911 aa15.38■□□□□ 0.05
LINC00473-202ENST00000455853 USP25Q9UHP3 1055 aa15.38■□□□□ 0.05
LINC00473-202ENST00000455853 ADCY5O95622 1261 aa15.38■□□□□ 0.05
LINC00473-202ENST00000455853 SYT1P21579 422 aa15.38■□□□□ 0.05
LINC00473-202ENST00000455853 AK2P54819 239 aa15.38■□□□□ 0.05
LINC00473-202ENST00000455853 GPATCH3Q96I76 525 aa15.38■□□□□ 0.05
LINC00473-202ENST00000455853 PSME1Q06323 249 aa15.37■□□□□ 0.05
LINC00473-202ENST00000455853 HDGFL1Q5TGJ6 251 aa15.37■□□□□ 0.05
LINC00473-202ENST00000455853 PPP1R42Q7Z4L9 355 aa15.37■□□□□ 0.05
LINC00473-202ENST00000455853 NGLY1Q96IV0 654 aa15.37■□□□□ 0.05
LINC00473-202ENST00000455853 CNPY2Q9Y2B0 182 aa15.37■□□□□ 0.05
LINC00473-202ENST00000455853 KIF1AQ12756 1690 aa15.37■□□□□ 0.05
LINC00473-202ENST00000455853 CCDC171Q6TFL3 1326 aa15.37■□□□□ 0.05
LINC00473-202ENST00000455853 RGPD8O14715 1765 aaPredicted RBP15.37■□□□□ 0.05
LINC00473-202ENST00000455853 HIP1O00291 1037 aa15.36■□□□□ 0.05
LINC00473-202ENST00000455853 ERC1Q8IUD2 1116 aa15.36■□□□□ 0.05
LINC00473-202ENST00000455853 MARF1Q9Y4F3 1742 aaKnown RBP15.36■□□□□ 0.05
LINC00473-202ENST00000455853 RUFY3Q7L099 469 aa15.36■□□□□ 0.05
LINC00473-202ENST00000455853 FUCA2Q9BTY2 467 aa15.36■□□□□ 0.05
LINC00473-202ENST00000455853 CCDC94Q9BW85 323 aaPredicted RBP15.36■□□□□ 0.05
LINC00473-202ENST00000455853 IL1RAPL2Q9NP60 686 aa15.36■□□□□ 0.05
LINC00473-202ENST00000455853 DIAPH3Q9NSV4 1193 aa15.36■□□□□ 0.05
LINC00473-202ENST00000455853 MTX1Q13505 466 aa15.35■□□□□ 0.05
LINC00473-202ENST00000455853 NUTM1Q86Y26 1132 aa15.35■□□□□ 0.05
LINC00473-202ENST00000455853 GDPD2Q9HCC8 539 aa15.35■□□□□ 0.05
LINC00473-202ENST00000455853 CYP46A1Q9Y6A2 500 aa15.35■□□□□ 0.05
LINC00473-202ENST00000455853 COL22A1Q8NFW1 1626 aaPredicted RBP15.35■□□□□ 0.05
LINC00473-202ENST00000455853 CCDC192P0DO97 292 aa15.34■□□□□ 0.05
LINC00473-202ENST00000455853 PDCP20941 246 aa15.34■□□□□ 0.05
LINC00473-202ENST00000455853 LMOD2Q6P5Q4 547 aa15.34■□□□□ 0.05
LINC00473-202ENST00000455853 CABLES1Q8TDN4 633 aa15.34■□□□□ 0.05
LINC00473-202ENST00000455853 ELP1O95163 1332 aa15.34■□□□□ 0.05
LINC00473-202ENST00000455853 SRGAP3O43295 1099 aa15.33■□□□□ 0.05
LINC00473-202ENST00000455853 HCLS1P14317 486 aaPredicted RBP15.33■□□□□ 0.05
LINC00473-202ENST00000455853 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.05
LINC00473-202ENST00000455853 NGDNQ8NEJ9 315 aaKnown RBP15.33■□□□□ 0.05
LINC00473-202ENST00000455853 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.05
LINC00473-202ENST00000455853 ZSWIM6Q9HCJ5 1215 aa15.33■□□□□ 0.05
LINC00473-202ENST00000455853 PDRG1Q9NUG6 133 aa15.33■□□□□ 0.05
LINC00473-202ENST00000455853 HYPKQ9NX55 129 aa15.33■□□□□ 0.05
LINC00473-202ENST00000455853 CEMIPQ8WUJ3 1361 aa15.33■□□□□ 0.05
LINC00473-202ENST00000455853 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.05
LINC00473-202ENST00000455853 ZKSCAN1P17029 563 aaPredicted RBP15.33■□□□□ 0.04
LINC00473-202ENST00000455853 RXRBP28702 533 aa15.33■□□□□ 0.04
LINC00473-202ENST00000455853 HOXC9P31274 260 aa15.33■□□□□ 0.04
LINC00473-202ENST00000455853 ANKRD1Q15327 319 aa15.33■□□□□ 0.04
LINC00473-202ENST00000455853 CLASRPQ8N2M8 674 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms