RNA–Protein interactions for RNA: ENST00000454001.1

RPSAP54-201, Transcript of ribosomal protein SA pseudogene 54, humanhuman

BASIC

Gene RPSAP54, Length 886 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP54-201ENST00000454001 NPHP1O15259 732 aa10.93□□□□□ -0.66
RPSAP54-201ENST00000454001 A1BGP04217 495 aa10.93□□□□□ -0.66
RPSAP54-201ENST00000454001 EIF5P55010 431 aaKnown RBP10.93□□□□□ -0.66
RPSAP54-201ENST00000454001 CCDC146Q8IYE0 955 aa10.93□□□□□ -0.66
RPSAP54-201ENST00000454001 TTLL6Q8N841 843 aa10.93□□□□□ -0.66
RPSAP54-201ENST00000454001 RBM46Q8TBY0 533 aaKnown RBP10.93□□□□□ -0.66
RPSAP54-201ENST00000454001 ZNF622Q969S3 477 aaKnown RBP eCLIP10.93□□□□□ -0.66
RPSAP54-201ENST00000454001 FER1L6Q2WGJ9 1857 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 A0A087WZG4 1122 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 PRAMEF22A3QJZ6 481 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 BTBD11A6QL63 1104 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 LMNB1P20700 586 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 DUSP27Q5VZP5 1158 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 CFAP53Q96M91 514 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 SLX4Q8IY92 1834 aa10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 DICER1Q9UPY3 1922 aaKnown RBP10.92□□□□□ -0.66
RPSAP54-201ENST00000454001 ARFGEF2Q9Y6D5 1785 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 NFKBIEO00221 500 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 APAF1O14727 1248 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 C21orf2O43822 256 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 GOLGA2Q08379 1002 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 B4GALNT3Q6L9W6 998 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 PRR5LQ6MZQ0 368 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 MCM10Q7L590 875 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 NPM2Q86SE8 214 aaKnown RBP10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 TRMT2AQ8IZ69 625 aaKnown RBP10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 DLG5Q8TDM6 1919 aa10.91□□□□□ -0.66
RPSAP54-201ENST00000454001 CEMIPQ8WUJ3 1361 aa10.9□□□□□ -0.66
RPSAP54-201ENST00000454001 LAMB4A4D0S4 1761 aa10.9□□□□□ -0.66
RPSAP54-201ENST00000454001 CAMTA2O94983 1202 aa10.9□□□□□ -0.66
RPSAP54-201ENST00000454001 SLFN5Q08AF3 891 aa10.9□□□□□ -0.66
RPSAP54-201ENST00000454001 DCTN1Q14203 1278 aa10.9□□□□□ -0.66
RPSAP54-201ENST00000454001 DNAJC5GQ8N7S2 189 aa10.9□□□□□ -0.66
RPSAP54-201ENST00000454001 CNBD1Q8NA66 436 aa10.9□□□□□ -0.66
RPSAP54-201ENST00000454001 IL6STP40189 918 aaPredicted RBP10.89□□□□□ -0.67
RPSAP54-201ENST00000454001 FSTL1Q12841 308 aa10.89□□□□□ -0.67
RPSAP54-201ENST00000454001 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
RPSAP54-201ENST00000454001 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
RPSAP54-201ENST00000454001 SETDB2Q96T68 719 aa10.89□□□□□ -0.67
RPSAP54-201ENST00000454001 TEX13AQ9BXU3 409 aaPredicted RBP10.89□□□□□ -0.67
RPSAP54-201ENST00000454001 ZC3H4Q9UPT8 1303 aaKnown RBP10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 GLTPD2A6NH11 291 aa10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 FAM177BA6PVY3 158 aa10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 PDE6BP35913 854 aa10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 ST5P78524 1137 aa10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 SMC1BQ8NDV3 1235 aa10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 RTF1Q92541 710 aaKnown RBP10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 BRIP1Q9BX63 1249 aa10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 USP16Q9Y5T5 823 aa10.88□□□□□ -0.67
RPSAP54-201ENST00000454001 ERFEQ4G0M1 354 aa10.87□□□□□ -0.67
RPSAP54-201ENST00000454001 PRPF40BQ6NWY9 871 aaKnown RBP10.87□□□□□ -0.67
RPSAP54-201ENST00000454001 NBPF5PQ86XG9 351 aaPredicted RBP10.87□□□□□ -0.67
RPSAP54-201ENST00000454001 KLRG1Q96E93 195 aa10.87□□□□□ -0.67
RPSAP54-201ENST00000454001 KDM3BQ7LBC6 1761 aa10.87□□□□□ -0.67
RPSAP54-201ENST00000454001 E9PSI1 815 aa10.86□□□□□ -0.67
RPSAP54-201ENST00000454001 VEGFAP15692 232 aaPredicted RBP10.86□□□□□ -0.67
RPSAP54-201ENST00000454001 TAOK3Q9H2K8 898 aa10.86□□□□□ -0.67
RPSAP54-201ENST00000454001 SPINK5Q9NQ38 1064 aaPredicted RBP10.86□□□□□ -0.67
RPSAP54-201ENST00000454001 MIS18AQ9NYP9 233 aa10.86□□□□□ -0.67
RPSAP54-201ENST00000454001 OLFM4Q6UX06 510 aa10.85□□□□□ -0.67
RPSAP54-201ENST00000454001 WWC1Q8IX03 1113 aa10.85□□□□□ -0.67
RPSAP54-201ENST00000454001 EXOC6Q8TAG9 804 aa10.85□□□□□ -0.67
RPSAP54-201ENST00000454001 NUP98P52948 1817 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 NBPF26B4DH59 902 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 SNRPA1P09661 255 aaKnown RBP10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 SRGNP10124 158 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 CCDC27Q2M243 656 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 NBPF10Q6P3W6 841 aaKnown RBP10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 NBPF15Q8N660 670 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 CNKSR1Q969H4 720 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 MASTLQ96GX5 879 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 CCDC136Q96JN2 1154 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 NIP7Q9Y221 180 aaKnown RBP eCLIP10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 ZNF652Q9Y2D9 606 aa10.84□□□□□ -0.67
RPSAP54-201ENST00000454001 POTECB2RU33 542 aa10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 CAPN15O75808 1086 aa10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 DDNO94850 711 aaPredicted RBP10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 POTEIP0CG38 1075 aa10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 STYK1Q6J9G0 422 aa10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 THUMPD2Q9BTF0 503 aaKnown RBP10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
RPSAP54-201ENST00000454001 ABCC12Q96J65 1359 aa10.82□□□□□ -0.68
RPSAP54-201ENST00000454001 PLIN1O60240 522 aa10.82□□□□□ -0.68
RPSAP54-201ENST00000454001 HLFQ16534 295 aa10.82□□□□□ -0.68
RPSAP54-201ENST00000454001 COL13A1Q5TAT6 717 aaPredicted RBP10.82□□□□□ -0.68
RPSAP54-201ENST00000454001 WDR63Q8IWG1 891 aa10.82□□□□□ -0.68
RPSAP54-201ENST00000454001 PLEKHF1Q96S99 279 aa10.82□□□□□ -0.68
RPSAP54-201ENST00000454001 ZNF277Q9NRM2 450 aaPredicted RBP10.82□□□□□ -0.68
RPSAP54-201ENST00000454001 CCDC93Q567U6 631 aa10.81□□□□□ -0.68
RPSAP54-201ENST00000454001 NUTM1Q86Y26 1132 aa10.81□□□□□ -0.68
RPSAP54-201ENST00000454001 JMYQ8N9B5 988 aa10.81□□□□□ -0.68
RPSAP54-201ENST00000454001 CRBNQ96SW2 442 aa10.81□□□□□ -0.68
RPSAP54-201ENST00000454001 RRP7AQ9Y3A4 280 aaKnown RBP10.81□□□□□ -0.68
RPSAP54-201ENST00000454001 ZNF541Q9H0D2 1346 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms