RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ZNF652Q9Y2D9 606 aa19.21■□□□□ 0.67
LYSMD3-202ENST00000453259 PRPF40BQ6NWY9 871 aaKnown RBP19.2■□□□□ 0.66
LYSMD3-202ENST00000453259 L3MBTL3Q96JM7 780 aaPredicted RBP19.2■□□□□ 0.66
LYSMD3-202ENST00000453259 U2SURPO15042 1029 aaKnown RBP19.19■□□□□ 0.66
LYSMD3-202ENST00000453259 CC2D1BQ5T0F9 858 aaKnown RBP19.19■□□□□ 0.66
LYSMD3-202ENST00000453259 ZNF330Q9Y3S2 320 aaPredicted RBP19.19■□□□□ 0.66
LYSMD3-202ENST00000453259 SCN4AP35499 1836 aa19.18■□□□□ 0.66
LYSMD3-202ENST00000453259 DZIP3Q86Y13 1208 aaKnown RBP19.18■□□□□ 0.66
LYSMD3-202ENST00000453259 BTBD11A6QL63 1104 aa19.17■□□□□ 0.66
LYSMD3-202ENST00000453259 CCDC93Q567U6 631 aa19.17■□□□□ 0.66
LYSMD3-202ENST00000453259 LDHDQ86WU2 507 aa19.17■□□□□ 0.66
LYSMD3-202ENST00000453259 SLX4Q8IY92 1834 aa19.16■□□□□ 0.66
LYSMD3-202ENST00000453259 KLRG2A4D1S0 409 aaPredicted RBP19.16■□□□□ 0.66
LYSMD3-202ENST00000453259 A1BGP04217 495 aa19.16■□□□□ 0.66
LYSMD3-202ENST00000453259 NPR1P16066 1061 aa19.16■□□□□ 0.66
LYSMD3-202ENST00000453259 NBPF5PQ86XG9 351 aaPredicted RBP19.16■□□□□ 0.66
LYSMD3-202ENST00000453259 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
LYSMD3-202ENST00000453259 CFAP53Q96M91 514 aa19.16■□□□□ 0.66
LYSMD3-202ENST00000453259 DDNO94850 711 aaPredicted RBP19.15■□□□□ 0.66
LYSMD3-202ENST00000453259 C7orf43Q8WVR3 580 aa19.15■□□□□ 0.66
LYSMD3-202ENST00000453259 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
LYSMD3-202ENST00000453259 CNTNAP1P78357 1384 aa19.15■□□□□ 0.66
LYSMD3-202ENST00000453259 SNRPA1P09661 255 aaKnown RBP19.14■□□□□ 0.65
LYSMD3-202ENST00000453259 TPTE2Q6XPS3 522 aa19.14■□□□□ 0.65
LYSMD3-202ENST00000453259 RTKN2Q8IZC4 609 aa19.14■□□□□ 0.65
LYSMD3-202ENST00000453259 PASKQ96RG2 1323 aa19.14■□□□□ 0.65
LYSMD3-202ENST00000453259 CAPN15O75808 1086 aa19.13■□□□□ 0.65
LYSMD3-202ENST00000453259 FKBP4Q02790 459 aaKnown RBP eCLIP19.13■□□□□ 0.65
LYSMD3-202ENST00000453259 NUDCQ9Y266 331 aa19.13■□□□□ 0.65
LYSMD3-202ENST00000453259 CCDC24Q8N4L8 307 aa19.12■□□□□ 0.65
LYSMD3-202ENST00000453259 RTF1Q92541 710 aaKnown RBP19.12■□□□□ 0.65
LYSMD3-202ENST00000453259 RSPH6AQ9H0K4 717 aa19.12■□□□□ 0.65
LYSMD3-202ENST00000453259 TAF1DQ9H5J8 278 aaPredicted RBP19.12■□□□□ 0.65
LYSMD3-202ENST00000453259 PRDM10Q9NQV6 1147 aa19.12■□□□□ 0.65
LYSMD3-202ENST00000453259 HTATSF1O43719 755 aaKnown RBP19.11■□□□□ 0.65
LYSMD3-202ENST00000453259 ALDH1B1P30837 517 aa19.11■□□□□ 0.65
LYSMD3-202ENST00000453259 PRKAR2BP31323 418 aa19.11■□□□□ 0.65
LYSMD3-202ENST00000453259 PNMA8AQ86V59 439 aaPredicted RBP19.11■□□□□ 0.65
LYSMD3-202ENST00000453259 CACNA1SQ13698 1873 aa19.1■□□□□ 0.65
LYSMD3-202ENST00000453259 TMEM88BA6NKF7 163 aa19.1■□□□□ 0.65
LYSMD3-202ENST00000453259 GRIPAP1Q4V328 841 aa19.1■□□□□ 0.65
LYSMD3-202ENST00000453259 MKRN1Q9UHC7 482 aaKnown RBP19.1■□□□□ 0.65
LYSMD3-202ENST00000453259 HACL1Q9UJ83 578 aa19.1■□□□□ 0.65
LYSMD3-202ENST00000453259 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
LYSMD3-202ENST00000453259 POTEIP0CG38 1075 aa19.09■□□□□ 0.65
LYSMD3-202ENST00000453259 POTEJP0CG39 1038 aa19.09■□□□□ 0.65
LYSMD3-202ENST00000453259 PHACTR3Q96KR7 559 aa19.09■□□□□ 0.65
LYSMD3-202ENST00000453259 CC2D2BQ6DHV5 1058 aa19.08■□□□□ 0.64
LYSMD3-202ENST00000453259 AIDAQ96BJ3 306 aa19.08■□□□□ 0.64
LYSMD3-202ENST00000453259 NIP7Q9Y221 180 aaKnown RBP eCLIP19.08■□□□□ 0.64
LYSMD3-202ENST00000453259 ADAMTSL1Q8N6G6 1762 aa19.07■□□□□ 0.64
LYSMD3-202ENST00000453259 KCNQ3O43525 872 aa19.07■□□□□ 0.64
LYSMD3-202ENST00000453259 ITGBL1O95965 494 aaPredicted RBP19.07■□□□□ 0.64
LYSMD3-202ENST00000453259 CTCFP49711 727 aaPredicted RBP19.07■□□□□ 0.64
LYSMD3-202ENST00000453259 PSMD1Q99460 953 aa19.07■□□□□ 0.64
LYSMD3-202ENST00000453259 RIC1Q4ADV7 1423 aa19.07■□□□□ 0.64
LYSMD3-202ENST00000453259 FZD9O00144 591 aa19.06■□□□□ 0.64
LYSMD3-202ENST00000453259 GPC2Q8N158 579 aa19.06■□□□□ 0.64
LYSMD3-202ENST00000453259 NYXQ9GZU5 481 aa19.06■□□□□ 0.64
LYSMD3-202ENST00000453259 IBTKQ9P2D0 1353 aaPredicted RBP19.06■□□□□ 0.64
LYSMD3-202ENST00000453259 EPHX2P34913 555 aa19.05■□□□□ 0.64
LYSMD3-202ENST00000453259 IARSP41252 1262 aaKnown RBP19.05■□□□□ 0.64
LYSMD3-202ENST00000453259 CRY2Q49AN0 593 aa19.05■□□□□ 0.64
LYSMD3-202ENST00000453259 ZNF541Q9H0D2 1346 aa19.04■□□□□ 0.64
LYSMD3-202ENST00000453259 LAMB4A4D0S4 1761 aa19.04■□□□□ 0.64
LYSMD3-202ENST00000453259 RASSF10A6NK89 507 aa19.04■□□□□ 0.64
LYSMD3-202ENST00000453259 FOXN1O15353 648 aa19.04■□□□□ 0.64
LYSMD3-202ENST00000453259 JDP2Q8WYK2 163 aa19.04■□□□□ 0.64
LYSMD3-202ENST00000453259 ZNF277Q9NRM2 450 aaPredicted RBP19.04■□□□□ 0.64
LYSMD3-202ENST00000453259 SNED1Q8TER0 1413 aa19.03■□□□□ 0.64
LYSMD3-202ENST00000453259 NBPF26B4DH59 902 aa19.03■□□□□ 0.64
LYSMD3-202ENST00000453259 ERVV-1B6SEH8 477 aa19.03■□□□□ 0.64
LYSMD3-202ENST00000453259 GTF2E1P29083 439 aaPredicted RBP19.03■□□□□ 0.64
LYSMD3-202ENST00000453259 EAPPQ56P03 285 aaPredicted RBP19.03■□□□□ 0.64
LYSMD3-202ENST00000453259 NBPF10Q6P3W6 841 aaKnown RBP19.03■□□□□ 0.64
LYSMD3-202ENST00000453259 NBPF15Q8N660 670 aa19.03■□□□□ 0.64
LYSMD3-202ENST00000453259 U2AF1L5P0DN76 240 aaPredicted RBP19.02■□□□□ 0.64
LYSMD3-202ENST00000453259 VEGFBP49765 207 aa19.02■□□□□ 0.64
LYSMD3-202ENST00000453259 U2AF1Q01081 240 aaKnown RBP eCLIP19.02■□□□□ 0.642e-12■■■■■ 59
LYSMD3-202ENST00000453259 TAF7Q15545 349 aaPredicted RBP19.02■□□□□ 0.64
LYSMD3-202ENST00000453259 MCM10Q7L590 875 aa19.02■□□□□ 0.64
LYSMD3-202ENST00000453259 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
LYSMD3-202ENST00000453259 WBP1LQ9NX94 342 aa19.02■□□□□ 0.64
LYSMD3-202ENST00000453259 PRAMEF22A3QJZ6 481 aa19.01■□□□□ 0.63
LYSMD3-202ENST00000453259 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
LYSMD3-202ENST00000453259 CLEC11AQ9Y240 323 aa19.01■□□□□ 0.63
LYSMD3-202ENST00000453259 HOXA10P31260 410 aaPredicted RBP19■□□□□ 0.63
LYSMD3-202ENST00000453259 MAP2K1Q02750 393 aaPredicted RBP19■□□□□ 0.63
LYSMD3-202ENST00000453259 CNTROBQ8N137 903 aa19■□□□□ 0.63
LYSMD3-202ENST00000453259 SYNE4Q8N205 404 aa19■□□□□ 0.63
LYSMD3-202ENST00000453259 RNF123Q5XPI4 1314 aa19■□□□□ 0.63
LYSMD3-202ENST00000453259 NEFMP07197 916 aa18.99■□□□□ 0.63
LYSMD3-202ENST00000453259 EIF6P56537 245 aaKnown RBP18.99■□□□□ 0.63
LYSMD3-202ENST00000453259 DEFB115Q30KQ5 88 aa18.99■□□□□ 0.63
LYSMD3-202ENST00000453259 LMOD1P29536 600 aaPredicted RBP18.98■□□□□ 0.63
LYSMD3-202ENST00000453259 RPGRQ92834 1020 aaKnown RBP18.98■□□□□ 0.63
LYSMD3-202ENST00000453259 VPS33BQ9H267 617 aa18.98■□□□□ 0.63
LYSMD3-202ENST00000453259 MAP3K15Q6ZN16 1313 aa18.98■□□□□ 0.63
LYSMD3-202ENST00000453259 PPP2R1AP30153 589 aa18.97■□□□□ 0.63
LYSMD3-202ENST00000453259 HLFQ16534 295 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms