RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CLEC4GQ6UXB4 293 aa15.66■□□□□ 0.1
HERC3-207ENST00000452979 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
HERC3-207ENST00000452979 MASTLQ96GX5 879 aa15.66■□□□□ 0.1
HERC3-207ENST00000452979 RSPH6AQ9H0K4 717 aa15.66■□□□□ 0.1
HERC3-207ENST00000452979 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
HERC3-207ENST00000452979 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
HERC3-207ENST00000452979 PRPF40BQ6NWY9 871 aaKnown RBP15.65■□□□□ 0.1
HERC3-207ENST00000452979 DZIP3Q86Y13 1208 aaKnown RBP15.65■□□□□ 0.1
HERC3-207ENST00000452979 C7orf43Q8WVR3 580 aa15.65■□□□□ 0.1
HERC3-207ENST00000452979 KLRG2A4D1S0 409 aaPredicted RBP15.64■□□□□ 0.09
HERC3-207ENST00000452979 RGL2O15211 777 aa15.64■□□□□ 0.09
HERC3-207ENST00000452979 PRKAR2BP31323 418 aa15.64■□□□□ 0.09
HERC3-207ENST00000452979 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
HERC3-207ENST00000452979 SCN4AP35499 1836 aa15.64■□□□□ 0.09
HERC3-207ENST00000452979 DDNO94850 711 aaPredicted RBP15.63■□□□□ 0.09
HERC3-207ENST00000452979 SNRPA1P09661 255 aaKnown RBP15.63■□□□□ 0.09
HERC3-207ENST00000452979 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
HERC3-207ENST00000452979 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
HERC3-207ENST00000452979 TNS4Q8IZW8 715 aa15.63■□□□□ 0.09
HERC3-207ENST00000452979 NPHP1O15259 732 aa15.62■□□□□ 0.09
HERC3-207ENST00000452979 CFAP53Q96M91 514 aa15.62■□□□□ 0.09
HERC3-207ENST00000452979 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
HERC3-207ENST00000452979 PRAMEF22A3QJZ6 481 aa15.61■□□□□ 0.09
HERC3-207ENST00000452979 CNGB1Q14028 1251 aaPredicted RBP15.61■□□□□ 0.09
HERC3-207ENST00000452979 NBPF5PQ86XG9 351 aaPredicted RBP15.61■□□□□ 0.09
HERC3-207ENST00000452979 ZNF652Q9Y2D9 606 aa15.61■□□□□ 0.09
HERC3-207ENST00000452979 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
HERC3-207ENST00000452979 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
HERC3-207ENST00000452979 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
HERC3-207ENST00000452979 POTEJP0CG39 1038 aa15.6■□□□□ 0.09
HERC3-207ENST00000452979 NPR1P16066 1061 aa15.6■□□□□ 0.09
HERC3-207ENST00000452979 PIP4K2AP48426 406 aaPredicted RBP15.6■□□□□ 0.09
HERC3-207ENST00000452979 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
HERC3-207ENST00000452979 TPTE2Q6XPS3 522 aa15.6■□□□□ 0.09
HERC3-207ENST00000452979 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
HERC3-207ENST00000452979 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
HERC3-207ENST00000452979 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
HERC3-207ENST00000452979 IQCA1LA6NCM1 817 aa15.59■□□□□ 0.09
HERC3-207ENST00000452979 CCDC93Q567U6 631 aa15.59■□□□□ 0.09
HERC3-207ENST00000452979 MCM10Q7L590 875 aa15.59■□□□□ 0.09
HERC3-207ENST00000452979 RTF1Q92541 710 aaKnown RBP15.59■□□□□ 0.09
HERC3-207ENST00000452979 PASKQ96RG2 1323 aa15.59■□□□□ 0.09
HERC3-207ENST00000452979 FKBP4Q02790 459 aaKnown RBP eCLIP15.58■□□□□ 0.08
HERC3-207ENST00000452979 LDHDQ86WU2 507 aa15.58■□□□□ 0.08
HERC3-207ENST00000452979 TAF1DQ9H5J8 278 aaPredicted RBP15.58■□□□□ 0.08
HERC3-207ENST00000452979 NIP7Q9Y221 180 aaKnown RBP eCLIP15.58■□□□□ 0.08
HERC3-207ENST00000452979 U2AF1L5P0DN76 240 aaPredicted RBP15.57■□□□□ 0.08
HERC3-207ENST00000452979 PPP2R1AP30153 589 aa15.57■□□□□ 0.08
HERC3-207ENST00000452979 ZEB1P37275 1124 aaPredicted RBP15.57■□□□□ 0.08
HERC3-207ENST00000452979 U2AF1Q01081 240 aaKnown RBP eCLIP15.57■□□□□ 0.08
HERC3-207ENST00000452979 RTKN2Q8IZC4 609 aa15.57■□□□□ 0.08
HERC3-207ENST00000452979 CAPN15O75808 1086 aa15.56■□□□□ 0.08
HERC3-207ENST00000452979 ITGBL1O95965 494 aaPredicted RBP15.56■□□□□ 0.08
HERC3-207ENST00000452979 ALDH1B1P30837 517 aa15.56■□□□□ 0.08
HERC3-207ENST00000452979 TAF7Q15545 349 aaPredicted RBP15.56■□□□□ 0.08
HERC3-207ENST00000452979 MKRN1Q9UHC7 482 aaKnown RBP15.56■□□□□ 0.08
HERC3-207ENST00000452979 ADAMTSL1Q8N6G6 1762 aa15.56■□□□□ 0.08
HERC3-207ENST00000452979 LAMB4A4D0S4 1761 aa15.55■□□□□ 0.08
HERC3-207ENST00000452979 CNTNAP1P78357 1384 aa15.55■□□□□ 0.08
HERC3-207ENST00000452979 DCTN1Q14203 1278 aa15.55■□□□□ 0.08
HERC3-207ENST00000452979 HLFQ16534 295 aa15.55■□□□□ 0.08
HERC3-207ENST00000452979 FZD9O00144 591 aa15.54■□□□□ 0.08
HERC3-207ENST00000452979 ZNF277Q9NRM2 450 aaPredicted RBP15.54■□□□□ 0.08
HERC3-207ENST00000452979 NUP98P52948 1817 aa15.54■□□□□ 0.08
HERC3-207ENST00000452979 SNED1Q8TER0 1413 aa15.53■□□□□ 0.08
HERC3-207ENST00000452979 ZNF541Q9H0D2 1346 aa15.53■□□□□ 0.08
HERC3-207ENST00000452979 CRY2Q49AN0 593 aa15.53■□□□□ 0.08
HERC3-207ENST00000452979 OLFM4Q6UX06 510 aa15.53■□□□□ 0.08
HERC3-207ENST00000452979 HACL1Q9UJ83 578 aa15.53■□□□□ 0.08
HERC3-207ENST00000452979 KDM3BQ7LBC6 1761 aa15.53■□□□□ 0.08
HERC3-207ENST00000452979 DLG5Q8TDM6 1919 aa15.53■□□□□ 0.08
HERC3-207ENST00000452979 TMEM88BA6NKF7 163 aa15.52■□□□□ 0.08
HERC3-207ENST00000452979 ERVV-1B6SEH8 477 aa15.52■□□□□ 0.08
HERC3-207ENST00000452979 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
HERC3-207ENST00000452979 PNMA8AQ86V59 439 aaPredicted RBP15.52■□□□□ 0.08
HERC3-207ENST00000452979 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
HERC3-207ENST00000452979 PSMD1Q99460 953 aa15.52■□□□□ 0.08
HERC3-207ENST00000452979 FAM177BA6PVY3 158 aa15.51■□□□□ 0.07
HERC3-207ENST00000452979 GTF2E1P29083 439 aaPredicted RBP15.51■□□□□ 0.07
HERC3-207ENST00000452979 EPHX2P34913 555 aa15.51■□□□□ 0.07
HERC3-207ENST00000452979 CC2D2BQ6DHV5 1058 aa15.51■□□□□ 0.07
HERC3-207ENST00000452979 GPC2Q8N158 579 aa15.51■□□□□ 0.07
HERC3-207ENST00000452979 PNISRQ8TF01 805 aaKnown RBP15.51■□□□□ 0.07
HERC3-207ENST00000452979 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
HERC3-207ENST00000452979 MIS18AQ9NYP9 233 aa15.51■□□□□ 0.07
HERC3-207ENST00000452979 HOXA10P31260 410 aaPredicted RBP15.5■□□□□ 0.07
HERC3-207ENST00000452979 VEGFBP49765 207 aa15.5■□□□□ 0.07
HERC3-207ENST00000452979 EAPPQ56P03 285 aaPredicted RBP15.5■□□□□ 0.07
HERC3-207ENST00000452979 PRDM10Q9NQV6 1147 aa15.5■□□□□ 0.07
HERC3-207ENST00000452979 FOXN1O15353 648 aa15.49■□□□□ 0.07
HERC3-207ENST00000452979 GRIPAP1Q4V328 841 aa15.49■□□□□ 0.07
HERC3-207ENST00000452979 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
HERC3-207ENST00000452979 RIC1Q4ADV7 1423 aa15.49■□□□□ 0.07
HERC3-207ENST00000452979 MAP3K15Q6ZN16 1313 aa15.48■□□□□ 0.07
HERC3-207ENST00000452979 CNTROBQ8N137 903 aa15.48■□□□□ 0.07
HERC3-207ENST00000452979 JDP2Q8WYK2 163 aa15.48■□□□□ 0.07
HERC3-207ENST00000452979 ABCC12Q96J65 1359 aa15.48■□□□□ 0.07
HERC3-207ENST00000452979 IBTKQ9P2D0 1353 aaPredicted RBP15.48■□□□□ 0.07
HERC3-207ENST00000452979 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
HERC3-207ENST00000452979 RASSF10A6NK89 507 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms