RNA–Protein interactions for RNA: ENST00000452494.2

AL513542.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL513542.1, Length 731 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL513542.1-201ENST00000452494 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
AL513542.1-201ENST00000452494 CACNA1SQ13698 1873 aa13.06□□□□□ -0.32
AL513542.1-201ENST00000452494 HMOX1P09601 288 aa13.06□□□□□ -0.32
AL513542.1-201ENST00000452494 PDE6BP35913 854 aa13.06□□□□□ -0.32
AL513542.1-201ENST00000452494 LDHDQ86WU2 507 aa13.06□□□□□ -0.32
AL513542.1-201ENST00000452494 ABHD8Q96I13 439 aa13.06□□□□□ -0.32
AL513542.1-201ENST00000452494 ARFGEF2Q9Y6D5 1785 aa13.05□□□□□ -0.32
AL513542.1-201ENST00000452494 SCN4AP35499 1836 aa13.05□□□□□ -0.32
AL513542.1-201ENST00000452494 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
AL513542.1-201ENST00000452494 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
AL513542.1-201ENST00000452494 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
AL513542.1-201ENST00000452494 RASSF10A6NK89 507 aa13.04□□□□□ -0.32
AL513542.1-201ENST00000452494 FMR1Q06787 632 aaKnown RBP eCLIP13.04□□□□□ -0.32
AL513542.1-201ENST00000452494 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
AL513542.1-201ENST00000452494 SNED1Q8TER0 1413 aa13.04□□□□□ -0.32
AL513542.1-201ENST00000452494 COL4A5P29400 1685 aa13.03□□□□□ -0.32
AL513542.1-201ENST00000452494 A1BGP04217 495 aa13.03□□□□□ -0.32
AL513542.1-201ENST00000452494 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
AL513542.1-201ENST00000452494 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
AL513542.1-201ENST00000452494 HEG1Q9ULI3 1381 aa13.03□□□□□ -0.32
AL513542.1-201ENST00000452494 LTBP1Q14766 1721 aa13.02□□□□□ -0.32
AL513542.1-201ENST00000452494 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.32
AL513542.1-201ENST00000452494 TNRC18O15417 2968 aaPredicted RBP13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 KCNQ3O43525 872 aa13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 SLC51AQ86UW1 340 aa13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 CNKSR1Q969H4 720 aa13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 ZNF277Q9NRM2 450 aaPredicted RBP13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 BCORQ6W2J9 1755 aa13.02□□□□□ -0.33
AL513542.1-201ENST00000452494 A0A087WZG4 1122 aa13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 KLRG2A4D1S0 409 aaPredicted RBP13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 IQCA1LA6NCM1 817 aa13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 STARD3NLO95772 234 aa13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 IL6STP40189 918 aaPredicted RBP13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 PIP4K2AP48426 406 aaPredicted RBP13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 ZNF790Q6PG37 636 aa13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 AIDAQ96BJ3 306 aa13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 THSD7BQ9C0I4 1608 aa13.01□□□□□ -0.33
AL513542.1-201ENST00000452494 WDR33Q9C0J8 1336 aaKnown RBP13□□□□□ -0.33
AL513542.1-201ENST00000452494 EPHX2P34913 555 aa13□□□□□ -0.33
AL513542.1-201ENST00000452494 DEFB115Q30KQ5 88 aa13□□□□□ -0.33
AL513542.1-201ENST00000452494 CNTROBQ8N137 903 aa13□□□□□ -0.33
AL513542.1-201ENST00000452494 MASTLQ96GX5 879 aa13□□□□□ -0.33
AL513542.1-201ENST00000452494 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
AL513542.1-201ENST00000452494 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
AL513542.1-201ENST00000452494 FZD9O00144 591 aa12.99□□□□□ -0.33
AL513542.1-201ENST00000452494 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
AL513542.1-201ENST00000452494 RGS19P49795 217 aa12.99□□□□□ -0.33
AL513542.1-201ENST00000452494 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
AL513542.1-201ENST00000452494 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
AL513542.1-201ENST00000452494 FKBP4Q02790 459 aaKnown RBP eCLIP12.98□□□□□ -0.33
AL513542.1-201ENST00000452494 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
AL513542.1-201ENST00000452494 CCDC93Q567U6 631 aa12.97□□□□□ -0.33
AL513542.1-201ENST00000452494 CST9Q5W186 159 aa12.97□□□□□ -0.33
AL513542.1-201ENST00000452494 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
AL513542.1-201ENST00000452494 DDX21Q9NR30 783 aaKnown RBP eCLIP12.97□□□□□ -0.33
AL513542.1-201ENST00000452494 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
AL513542.1-201ENST00000452494 NPR1P16066 1061 aa12.96□□□□□ -0.33
AL513542.1-201ENST00000452494 SOGA3Q5TF21 947 aa12.96□□□□□ -0.33
AL513542.1-201ENST00000452494 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.33
AL513542.1-201ENST00000452494 TSKSQ9UJT2 592 aa12.96□□□□□ -0.33
AL513542.1-201ENST00000452494 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
AL513542.1-201ENST00000452494 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 TRAF5O00463 557 aa12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 ST5P78524 1137 aa12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 SYNE4Q8N205 404 aa12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
AL513542.1-201ENST00000452494 CCDC85CA6NKD9 419 aa12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 EPS15P42566 896 aa12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 SCNN1DP51172 638 aa12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 MLLT1Q03111 559 aaPredicted RBP12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 GPC2Q8N158 579 aa12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 CAPNS2Q96L46 248 aa12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 ABT1Q9ULW3 272 aaKnown RBP12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
AL513542.1-201ENST00000452494 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
AL513542.1-201ENST00000452494 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
AL513542.1-201ENST00000452494 AOC2O75106 756 aa12.93□□□□□ -0.34
AL513542.1-201ENST00000452494 PHACTR3Q96KR7 559 aa12.93□□□□□ -0.34
AL513542.1-201ENST00000452494 FMNL2Q96PY5 1086 aa12.93□□□□□ -0.34
AL513542.1-201ENST00000452494 ABCC12Q96J65 1359 aa12.93□□□□□ -0.34
AL513542.1-201ENST00000452494 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
AL513542.1-201ENST00000452494 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.34
AL513542.1-201ENST00000452494 TEFQ10587 303 aa12.92□□□□□ -0.34
AL513542.1-201ENST00000452494 HLFQ16534 295 aa12.92□□□□□ -0.34
AL513542.1-201ENST00000452494 CLEC4GQ6UXB4 293 aa12.92□□□□□ -0.34
AL513542.1-201ENST00000452494 GPR101Q96P66 508 aaPredicted RBP12.92□□□□□ -0.34
AL513542.1-201ENST00000452494 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms