RNA–Protein interactions for RNA: ENST00000452260.6

SATB1-208, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-208ENST00000452260 PER1O15534 1290 aaPredicted RBP13.21□□□□□ -0.29
SATB1-208ENST00000452260 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.29
SATB1-208ENST00000452260 SRGNP10124 158 aa13.21□□□□□ -0.29
SATB1-208ENST00000452260 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
SATB1-208ENST00000452260 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
SATB1-208ENST00000452260 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.29
SATB1-208ENST00000452260 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
SATB1-208ENST00000452260 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
SATB1-208ENST00000452260 MKRN1Q9UHC7 482 aaKnown RBP13.2□□□□□ -0.3
SATB1-208ENST00000452260 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
SATB1-208ENST00000452260 CCDC88AQ3V6T2 1871 aa13.2□□□□□ -0.3
SATB1-208ENST00000452260 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
SATB1-208ENST00000452260 LDHDQ86WU2 507 aa13.19□□□□□ -0.3
SATB1-208ENST00000452260 NBPF5PQ86XG9 351 aaPredicted RBP13.19□□□□□ -0.3
SATB1-208ENST00000452260 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
SATB1-208ENST00000452260 ANKRD31Q8N7Z5 1873 aa13.18□□□□□ -0.3
SATB1-208ENST00000452260 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
SATB1-208ENST00000452260 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
SATB1-208ENST00000452260 FER1L6Q2WGJ9 1857 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 NPR1P16066 1061 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
SATB1-208ENST00000452260 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
SATB1-208ENST00000452260 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
SATB1-208ENST00000452260 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 TAF1DQ9H5J8 278 aaPredicted RBP13.17□□□□□ -0.3
SATB1-208ENST00000452260 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
SATB1-208ENST00000452260 DICER1Q9UPY3 1922 aaKnown RBP13.16□□□□□ -0.3
SATB1-208ENST00000452260 KCNQ3O43525 872 aa13.16□□□□□ -0.3
SATB1-208ENST00000452260 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
SATB1-208ENST00000452260 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
SATB1-208ENST00000452260 RTKN2Q8IZC4 609 aa13.16□□□□□ -0.3
SATB1-208ENST00000452260 C7orf43Q8WVR3 580 aa13.16□□□□□ -0.3
SATB1-208ENST00000452260 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
SATB1-208ENST00000452260 CNTNAP1P78357 1384 aa13.16□□□□□ -0.3
SATB1-208ENST00000452260 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
SATB1-208ENST00000452260 TMEM88BA6NKF7 163 aa13.15□□□□□ -0.3
SATB1-208ENST00000452260 RGL2O15211 777 aa13.15□□□□□ -0.3
SATB1-208ENST00000452260 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
SATB1-208ENST00000452260 EAPPQ56P03 285 aaPredicted RBP13.15□□□□□ -0.3
SATB1-208ENST00000452260 PRDM10Q9NQV6 1147 aa13.15□□□□□ -0.3
SATB1-208ENST00000452260 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
SATB1-208ENST00000452260 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
SATB1-208ENST00000452260 COL11A2P13942 1736 aaPredicted RBP13.15□□□□□ -0.3
SATB1-208ENST00000452260 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
SATB1-208ENST00000452260 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
SATB1-208ENST00000452260 KLRG2A4D1S0 409 aaPredicted RBP13.14□□□□□ -0.31
SATB1-208ENST00000452260 FOXN1O15353 648 aa13.14□□□□□ -0.31
SATB1-208ENST00000452260 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
SATB1-208ENST00000452260 ALDH1B1P30837 517 aa13.14□□□□□ -0.31
SATB1-208ENST00000452260 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
SATB1-208ENST00000452260 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
SATB1-208ENST00000452260 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
SATB1-208ENST00000452260 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
SATB1-208ENST00000452260 EPHX2P34913 555 aa13.13□□□□□ -0.31
SATB1-208ENST00000452260 PNMA8AQ86V59 439 aaPredicted RBP13.13□□□□□ -0.31
SATB1-208ENST00000452260 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
SATB1-208ENST00000452260 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
SATB1-208ENST00000452260 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
SATB1-208ENST00000452260 ITGBL1O95965 494 aaPredicted RBP13.12□□□□□ -0.31
SATB1-208ENST00000452260 VEGFBP49765 207 aa13.12□□□□□ -0.31
SATB1-208ENST00000452260 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
SATB1-208ENST00000452260 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
SATB1-208ENST00000452260 FAM177BA6PVY3 158 aa13.11□□□□□ -0.31
SATB1-208ENST00000452260 HTATSF1O43719 755 aaKnown RBP13.11□□□□□ -0.31
SATB1-208ENST00000452260 U2AF1L5P0DN76 240 aaPredicted RBP13.11□□□□□ -0.31
SATB1-208ENST00000452260 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
SATB1-208ENST00000452260 U2AF1Q01081 240 aaKnown RBP eCLIP13.11□□□□□ -0.31
SATB1-208ENST00000452260 MCM10Q7L590 875 aa13.11□□□□□ -0.31
SATB1-208ENST00000452260 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
SATB1-208ENST00000452260 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
SATB1-208ENST00000452260 SCN4AP35499 1836 aa13.11□□□□□ -0.31
SATB1-208ENST00000452260 PCNTO95613 3336 aa13.1□□□□□ -0.31
SATB1-208ENST00000452260 BCORQ6W2J9 1755 aa13.1□□□□□ -0.31
SATB1-208ENST00000452260 FZD9O00144 591 aa13.1□□□□□ -0.31
SATB1-208ENST00000452260 DEFB115Q30KQ5 88 aa13.1□□□□□ -0.31
SATB1-208ENST00000452260 CC2D2BQ6DHV5 1058 aa13.1□□□□□ -0.31
SATB1-208ENST00000452260 CNTROBQ8N137 903 aa13.1□□□□□ -0.31
SATB1-208ENST00000452260 NYXQ9GZU5 481 aa13.1□□□□□ -0.31
SATB1-208ENST00000452260 ARFGEF2Q9Y6D5 1785 aa13.09□□□□□ -0.31
SATB1-208ENST00000452260 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
SATB1-208ENST00000452260 EIF6P56537 245 aaKnown RBP13.09□□□□□ -0.31
SATB1-208ENST00000452260 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
SATB1-208ENST00000452260 NBPF10Q6P3W6 841 aaKnown RBP13.09□□□□□ -0.31
SATB1-208ENST00000452260 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
SATB1-208ENST00000452260 GPC2Q8N158 579 aa13.09□□□□□ -0.31
SATB1-208ENST00000452260 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
SATB1-208ENST00000452260 PSMD1Q99460 953 aa13.09□□□□□ -0.31
SATB1-208ENST00000452260 WBP1LQ9NX94 342 aa13.09□□□□□ -0.31
SATB1-208ENST00000452260 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
SATB1-208ENST00000452260 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
SATB1-208ENST00000452260 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
SATB1-208ENST00000452260 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
SATB1-208ENST00000452260 MAP2K1Q02750 393 aaPredicted RBP13.08□□□□□ -0.32
SATB1-208ENST00000452260 HLFQ16534 295 aa13.08□□□□□ -0.32
SATB1-208ENST00000452260 GRIPAP1Q4V328 841 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms