RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 HLFQ16534 295 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 TPTE2Q6XPS3 522 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 TSPYL6Q8N831 410 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 XAGE3Q8WTP9 111 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 STK31Q9BXU1 1019 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 ZBTB3Q9H5J0 574 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 NIP7Q9Y221 180 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL8A1-203ENST00000452013 UBR2Q8IWV8 1755 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 QSER1Q2KHR3 1735 aa11.43□□□□□ -0.58
COL8A1-203ENST00000452013 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
COL8A1-203ENST00000452013 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
COL8A1-203ENST00000452013 PROSER3Q2NL68 480 aa11.42□□□□□ -0.58
COL8A1-203ENST00000452013 HSP90AB3PQ58FF7 597 aa11.42□□□□□ -0.58
COL8A1-203ENST00000452013 GIGYF2Q6Y7W6 1299 aaKnown RBP11.42□□□□□ -0.58
COL8A1-203ENST00000452013 ANKRD13DQ6ZTN6 518 aa11.42□□□□□ -0.58
COL8A1-203ENST00000452013 SPINK5Q9NQ38 1064 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-203ENST00000452013 COL5A3P25940 1745 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-203ENST00000452013 VAMP4O75379 141 aa11.41□□□□□ -0.58
COL8A1-203ENST00000452013 DDX58O95786 925 aaKnown RBP11.41□□□□□ -0.58
COL8A1-203ENST00000452013 GTF2E1P29083 439 aaPredicted RBP11.41□□□□□ -0.58
COL8A1-203ENST00000452013 SLFN5Q08AF3 891 aa11.41□□□□□ -0.58
COL8A1-203ENST00000452013 GPR162Q16538 588 aa11.41□□□□□ -0.58
COL8A1-203ENST00000452013 NBPF5PQ86XG9 351 aaPredicted RBP11.41□□□□□ -0.58
COL8A1-203ENST00000452013 NLGN2Q8NFZ4 835 aa11.41□□□□□ -0.58
COL8A1-203ENST00000452013 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
COL8A1-203ENST00000452013 NYXQ9GZU5 481 aa11.41□□□□□ -0.58
COL8A1-203ENST00000452013 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
COL8A1-203ENST00000452013 CARMIL3Q8ND23 1372 aa11.41□□□□□ -0.58
COL8A1-203ENST00000452013 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
COL8A1-203ENST00000452013 PDE6BP35913 854 aa11.4□□□□□ -0.58
COL8A1-203ENST00000452013 ST5P78524 1137 aa11.4□□□□□ -0.58
COL8A1-203ENST00000452013 PARP10Q53GL7 1025 aa11.4□□□□□ -0.58
COL8A1-203ENST00000452013 RIC3Q7Z5B4 369 aa11.4□□□□□ -0.58
COL8A1-203ENST00000452013 ZNF34Q8IZ26 560 aa11.4□□□□□ -0.58
COL8A1-203ENST00000452013 CNBD1Q8NA66 436 aa11.4□□□□□ -0.58
COL8A1-203ENST00000452013 BRIP1Q9BX63 1249 aa11.4□□□□□ -0.58
COL8A1-203ENST00000452013 UBR3Q6ZT12 1888 aa11.4□□□□□ -0.59
COL8A1-203ENST00000452013 DLG5Q8TDM6 1919 aa11.39□□□□□ -0.59
COL8A1-203ENST00000452013 A0A0G2JLW4 131 aa11.39□□□□□ -0.59
COL8A1-203ENST00000452013 H0YIN7 160 aa11.39□□□□□ -0.59
COL8A1-203ENST00000452013 GRIN3BO60391 1043 aa11.39□□□□□ -0.59
COL8A1-203ENST00000452013 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
COL8A1-203ENST00000452013 PRR5LQ6MZQ0 368 aa11.39□□□□□ -0.59
COL8A1-203ENST00000452013 PPP1R42Q7Z4L9 355 aa11.39□□□□□ -0.59
COL8A1-203ENST00000452013 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
COL8A1-203ENST00000452013 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
COL8A1-203ENST00000452013 DPEP1P16444 411 aa11.38□□□□□ -0.59
COL8A1-203ENST00000452013 GPTP24298 496 aa11.38□□□□□ -0.59
COL8A1-203ENST00000452013 HNRNPUQ00839 825 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL8A1-203ENST00000452013 PHAXQ9H814 394 aaKnown RBP11.38□□□□□ -0.59
COL8A1-203ENST00000452013 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
COL8A1-203ENST00000452013 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
COL8A1-203ENST00000452013 C2CD5Q86YS7 1000 aa11.37□□□□□ -0.59
COL8A1-203ENST00000452013 TRMT2AQ8IZ69 625 aaKnown RBP11.37□□□□□ -0.59
COL8A1-203ENST00000452013 ZNF428Q96B54 188 aa11.37□□□□□ -0.59
COL8A1-203ENST00000452013 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
COL8A1-203ENST00000452013 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
COL8A1-203ENST00000452013 MYH14Q7Z406 1995 aaKnown RBP11.37□□□□□ -0.59
COL8A1-203ENST00000452013 C10orf71Q711Q0 1435 aa11.36□□□□□ -0.59
COL8A1-203ENST00000452013 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
COL8A1-203ENST00000452013 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
COL8A1-203ENST00000452013 KSR2Q6VAB6 950 aa11.36□□□□□ -0.59
COL8A1-203ENST00000452013 TUBGCP6Q96RT7 1819 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 CT47B1P0C2W7 299 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-203ENST00000452013 KCNA3P22001 575 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 CHRNA5P30532 468 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 DALRD3Q5D0E6 543 aaKnown RBP11.35□□□□□ -0.59
COL8A1-203ENST00000452013 NLRP10Q86W26 655 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 CCDC24Q8N4L8 307 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 ISCA1Q9BUE6 129 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 TRMT112Q9UI30 125 aaKnown RBP11.35□□□□□ -0.59
COL8A1-203ENST00000452013 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
COL8A1-203ENST00000452013 PI4KAP2A4QPH2 592 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 FLIIQ13045 1269 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 ERFEQ4G0M1 354 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 SLC10A5Q5PT55 438 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 G2E3Q7L622 706 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 PI4KAP1Q8N8J0 262 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 ZNF622Q969S3 477 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL8A1-203ENST00000452013 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 MYD88Q99836 296 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
COL8A1-203ENST00000452013 MAP3K2Q9Y2U5 619 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
COL8A1-203ENST00000452013 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
COL8A1-203ENST00000452013 COL24A1Q17RW2 1714 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-203ENST00000452013 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 NTSR2O95665 410 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
COL8A1-203ENST00000452013 ALDH1B1P30837 517 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-203ENST00000452013 STYK1Q6J9G0 422 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 TTLL6Q8N841 843 aa11.33□□□□□ -0.6
COL8A1-203ENST00000452013 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms