RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 IFIT2P09913 472 aaKnown RBP26.77■■□□□ 1.88
TTC3-210ENST00000450533 AK2P54819 239 aa26.77■■□□□ 1.88
TTC3-210ENST00000450533 SLC39A6Q13433 755 aa26.77■■□□□ 1.88
TTC3-210ENST00000450533 SUCLG2Q96I99 432 aa26.77■■□□□ 1.88
TTC3-210ENST00000450533 ECHDC1Q9NTX5 307 aa26.77■■□□□ 1.88
TTC3-210ENST00000450533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.77■■□□□ 1.88
TTC3-210ENST00000450533 SLIT3O75094 1523 aa26.77■■□□□ 1.88
TTC3-210ENST00000450533 HYPKQ9NX55 129 aa26.77■■□□□ 1.88
TTC3-210ENST00000450533 AACSQ86V21 672 aa26.76■■□□□ 1.87
TTC3-210ENST00000450533 TTC14Q96N46 770 aa26.76■■□□□ 1.87
TTC3-210ENST00000450533 KAZALD1Q96I82 304 aa26.76■■□□□ 1.87
TTC3-210ENST00000450533 NPHP4O75161 1426 aaPredicted RBP26.75■■□□□ 1.87
TTC3-210ENST00000450533 GRM8O00222 908 aa26.75■■□□□ 1.87
TTC3-210ENST00000450533 MBD3O95983 291 aa26.75■■□□□ 1.87
TTC3-210ENST00000450533 PTH1RQ03431 593 aa26.75■■□□□ 1.87
TTC3-210ENST00000450533 BICC1Q9H694 974 aaKnown RBP26.75■■□□□ 1.87
TTC3-210ENST00000450533 LRSAM1Q6UWE0 723 aa26.75■■□□□ 1.87
TTC3-210ENST00000450533 LINS1Q8NG48 757 aa26.75■■□□□ 1.87
TTC3-210ENST00000450533 ZNF142P52746 1687 aaPredicted RBP26.74■■□□□ 1.87
TTC3-210ENST00000450533 RUFY3Q7L099 469 aa26.74■■□□□ 1.87
TTC3-210ENST00000450533 DTNBO60941 627 aa26.74■■□□□ 1.87
TTC3-210ENST00000450533 CASTP20810 708 aaKnown RBP26.74■■□□□ 1.87
TTC3-210ENST00000450533 WDR33Q9C0J8 1336 aaKnown RBP26.73■■□□□ 1.87
TTC3-210ENST00000450533 OVOS2A0A0G2JMS6 1433 aa26.73■■□□□ 1.87
TTC3-210ENST00000450533 PDIA6Q15084 440 aa26.73■■□□□ 1.87
TTC3-210ENST00000450533 DDX21Q9NR30 783 aaKnown RBP eCLIP26.73■■□□□ 1.87
TTC3-210ENST00000450533 GADD45BO75293 160 aaPredicted RBP26.73■■□□□ 1.87
TTC3-210ENST00000450533 MYL6BP14649 208 aa26.73■■□□□ 1.87
TTC3-210ENST00000450533 ERC1Q8IUD2 1116 aa26.73■■□□□ 1.87
TTC3-210ENST00000450533 GPATCH3Q96I76 525 aa26.73■■□□□ 1.87
TTC3-210ENST00000450533 RPAP1Q9BWH6 1393 aaPredicted RBP26.72■■□□□ 1.87
TTC3-210ENST00000450533 SIL1Q9H173 461 aa26.72■■□□□ 1.87
TTC3-210ENST00000450533 ERBB3P21860 1342 aa26.72■■□□□ 1.87
TTC3-210ENST00000450533 SASH1O94885 1247 aa26.72■■□□□ 1.87
TTC3-210ENST00000450533 PRPF40BQ6NWY9 871 aaKnown RBP26.72■■□□□ 1.87
TTC3-210ENST00000450533 PROSER2Q86WR7 435 aaPredicted RBP26.72■■□□□ 1.87
TTC3-210ENST00000450533 CCDC8Q9H0W5 538 aaPredicted RBP26.72■■□□□ 1.87
TTC3-210ENST00000450533 CRYBG1Q9Y4K1 1723 aa26.71■■□□□ 1.87
TTC3-210ENST00000450533 RGPD5Q99666 1765 aa26.71■■□□□ 1.87
TTC3-210ENST00000450533 DDX58O95786 925 aaKnown RBP26.71■■□□□ 1.87
TTC3-210ENST00000450533 RUFY2Q8WXA3 655 aa26.71■■□□□ 1.87
TTC3-210ENST00000450533 LIMCH1Q9UPQ0 1083 aa26.71■■□□□ 1.87
TTC3-210ENST00000450533 ADCK5Q3MIX3 580 aa26.71■■□□□ 1.87
TTC3-210ENST00000450533 RIC3Q7Z5B4 369 aa26.71■■□□□ 1.87
TTC3-210ENST00000450533 DDX54Q8TDD1 881 aaKnown RBP26.71■■□□□ 1.87
TTC3-210ENST00000450533 NLRP2Q9NX02 1062 aa26.71■■□□□ 1.87
TTC3-210ENST00000450533 ZNF790Q6PG37 636 aa26.7■■□□□ 1.86
TTC3-210ENST00000450533 KLHDC4Q8TBB5 520 aa26.7■■□□□ 1.86
TTC3-210ENST00000450533 EAF2Q96CJ1 260 aaPredicted RBP26.7■■□□□ 1.86
TTC3-210ENST00000450533 LARGE1O95461 756 aa26.7■■□□□ 1.86
TTC3-210ENST00000450533 IGKV5-2P06315 115 aa26.7■■□□□ 1.86
TTC3-210ENST00000450533 TPRNQ4KMQ1 711 aa26.7■■□□□ 1.86
TTC3-210ENST00000450533 USP48Q86UV5 1035 aa26.7■■□□□ 1.86
TTC3-210ENST00000450533 RNF214Q8ND24 703 aa26.7■■□□□ 1.86
TTC3-210ENST00000450533 HDAC5Q9UQL6 1122 aa26.7■■□□□ 1.86
TTC3-210ENST00000450533 G3BP1Q13283 466 aaKnown RBP eCLIP26.69■■□□□ 1.86
TTC3-210ENST00000450533 TLR7Q9NYK1 1049 aaKnown RBP26.69■■□□□ 1.86
TTC3-210ENST00000450533 RAPGEF4Q8WZA2 1011 aa26.68■■□□□ 1.86
TTC3-210ENST00000450533 JAKMIP1Q96N16 626 aaKnown RBP26.68■■□□□ 1.86
TTC3-210ENST00000450533 NFATC2IPQ8NCF5 419 aa26.68■■□□□ 1.86
TTC3-210ENST00000450533 DDX17Q92841 729 aaKnown RBP26.68■■□□□ 1.86
TTC3-210ENST00000450533 EVI5LQ96CN4 794 aa26.68■■□□□ 1.86
TTC3-210ENST00000450533 FAM227BQ96M60 508 aa26.67■■□□□ 1.86
TTC3-210ENST00000450533 SIPA1L3O60292 1781 aaPredicted RBP26.67■■□□□ 1.86
TTC3-210ENST00000450533 PIP4K2AP48426 406 aaPredicted RBP26.67■■□□□ 1.86
TTC3-210ENST00000450533 ZSCAN30Q86W11 494 aa26.67■■□□□ 1.86
TTC3-210ENST00000450533 TCHHQ07283 1943 aa26.67■■□□□ 1.86
TTC3-210ENST00000450533 TRPM3Q9HCF6 1732 aaPredicted RBP26.66■■□□□ 1.86
TTC3-210ENST00000450533 UTYO14607 1347 aa26.66■■□□□ 1.86
TTC3-210ENST00000450533 SYT1P21579 422 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 XAGE3Q8WTP9 111 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 SLC52A2Q9HAB3 445 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 SMC3Q9UQE7 1217 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 CAMTA1Q9Y6Y1 1673 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 NPHP3Q7Z494 1330 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 CCDC83Q8IWF9 413 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 JARID2Q92833 1246 aaPredicted RBP26.65■■□□□ 1.86
TTC3-210ENST00000450533 BOLA2Q9H3K6 86 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 PDRG1Q9NUG6 133 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 CNPY2Q9Y2B0 182 aa26.65■■□□□ 1.86
TTC3-210ENST00000450533 ZSCAN22P10073 491 aaPredicted RBP26.64■■□□□ 1.86
TTC3-210ENST00000450533 COPS6Q7L5N1 327 aa26.64■■□□□ 1.86
TTC3-210ENST00000450533 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.64■■□□□ 1.86
TTC3-210ENST00000450533 KDM6AO15550 1401 aaPredicted RBP26.64■■□□□ 1.86
TTC3-210ENST00000450533 STX6O43752 255 aa26.64■■□□□ 1.85
TTC3-210ENST00000450533 NMIQ13287 307 aaPredicted RBP26.64■■□□□ 1.85
TTC3-210ENST00000450533 PDLIM2Q96JY6 352 aa26.64■■□□□ 1.85
TTC3-210ENST00000450533 MYD88Q99836 296 aa26.64■■□□□ 1.85
TTC3-210ENST00000450533 C1orf167Q5SNV9 1468 aa26.64■■□□□ 1.85
TTC3-210ENST00000450533 CCDC171Q6TFL3 1326 aa26.63■■□□□ 1.85
TTC3-210ENST00000450533 EPHA10Q5JZY3 1008 aa26.63■■□□□ 1.85
TTC3-210ENST00000450533 LARP1Q6PKG0 1096 aaKnown RBP26.63■■□□□ 1.85
TTC3-210ENST00000450533 NEURL1BA8MQ27 555 aa26.63■■□□□ 1.85
TTC3-210ENST00000450533 KCNJ4P48050 445 aa26.63■■□□□ 1.85
TTC3-210ENST00000450533 ZNF496Q96IT1 587 aaPredicted RBP26.63■■□□□ 1.85
TTC3-210ENST00000450533 NEXNQ0ZGT2 675 aa26.62■■□□□ 1.85
TTC3-210ENST00000450533 RBM8AQ9Y5S9 174 aaKnown RBP26.62■■□□□ 1.85
TTC3-210ENST00000450533 PHKG2P15735 406 aa26.62■■□□□ 1.85
TTC3-210ENST00000450533 NECTIN1Q15223 517 aa26.62■■□□□ 1.85
TTC3-210ENST00000450533 CYP46A1Q9Y6A2 500 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms