RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 DLEC1Q9Y238 1755 aa11.27□□□□□ -0.61
LINC01961-201ENST00000449954 IQCA1LA6NCM1 817 aa11.27□□□□□ -0.61
LINC01961-201ENST00000449954 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.61
LINC01961-201ENST00000449954 RC3H1Q5TC82 1133 aaKnown RBP11.27□□□□□ -0.61
LINC01961-201ENST00000449954 TMOD3Q9NYL9 352 aa11.27□□□□□ -0.61
LINC01961-201ENST00000449954 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.61
LINC01961-201ENST00000449954 WDR33Q9C0J8 1336 aaKnown RBP11.27□□□□□ -0.61
LINC01961-201ENST00000449954 CCDC88AQ3V6T2 1871 aa11.26□□□□□ -0.61
LINC01961-201ENST00000449954 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
LINC01961-201ENST00000449954 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
LINC01961-201ENST00000449954 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
LINC01961-201ENST00000449954 DICER1Q9UPY3 1922 aaKnown RBP11.25□□□□□ -0.61
LINC01961-201ENST00000449954 NFKBIEO00221 500 aa11.25□□□□□ -0.61
LINC01961-201ENST00000449954 RPS6KA4O75676 772 aa11.25□□□□□ -0.61
LINC01961-201ENST00000449954 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
LINC01961-201ENST00000449954 USHBP1Q8N6Y0 703 aa11.25□□□□□ -0.61
LINC01961-201ENST00000449954 MCOLN1Q9GZU1 580 aa11.25□□□□□ -0.61
LINC01961-201ENST00000449954 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
LINC01961-201ENST00000449954 SCN4AP35499 1836 aa11.24□□□□□ -0.61
LINC01961-201ENST00000449954 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
LINC01961-201ENST00000449954 DDR1Q08345 913 aa11.24□□□□□ -0.61
LINC01961-201ENST00000449954 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
LINC01961-201ENST00000449954 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
LINC01961-201ENST00000449954 TTLL6Q8N841 843 aa11.24□□□□□ -0.61
LINC01961-201ENST00000449954 TERF2IPQ9NYB0 399 aa11.24□□□□□ -0.61
LINC01961-201ENST00000449954 ASAP1Q9ULH1 1129 aa11.24□□□□□ -0.61
LINC01961-201ENST00000449954 CA12O43570 354 aa11.23□□□□□ -0.61
LINC01961-201ENST00000449954 ITGBL1O95965 494 aaPredicted RBP11.23□□□□□ -0.61
LINC01961-201ENST00000449954 COG3Q96JB2 828 aa11.23□□□□□ -0.61
LINC01961-201ENST00000449954 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
LINC01961-201ENST00000449954 A0A1W2PP64 1363 aa11.23□□□□□ -0.61
LINC01961-201ENST00000449954 LTBP1Q14766 1721 aa11.23□□□□□ -0.61
LINC01961-201ENST00000449954 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
LINC01961-201ENST00000449954 ECE1P42892 770 aa11.22□□□□□ -0.61
LINC01961-201ENST00000449954 GCC1Q96CN9 775 aa11.22□□□□□ -0.61
LINC01961-201ENST00000449954 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
LINC01961-201ENST00000449954 ATG3Q9NT62 314 aa11.21□□□□□ -0.61
LINC01961-201ENST00000449954 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
LINC01961-201ENST00000449954 ABT1Q9ULW3 272 aaKnown RBP11.21□□□□□ -0.61
LINC01961-201ENST00000449954 SPG7Q9UQ90 795 aa11.21□□□□□ -0.61
LINC01961-201ENST00000449954 ADAMTSL1Q8N6G6 1762 aa11.21□□□□□ -0.62
LINC01961-201ENST00000449954 INSRP06213 1382 aa11.2□□□□□ -0.62
LINC01961-201ENST00000449954 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
LINC01961-201ENST00000449954 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
LINC01961-201ENST00000449954 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
LINC01961-201ENST00000449954 DDNO94850 711 aaPredicted RBP11.2□□□□□ -0.62
LINC01961-201ENST00000449954 EMP3P54852 163 aa11.2□□□□□ -0.62
LINC01961-201ENST00000449954 TMC2Q8TDI7 906 aa11.2□□□□□ -0.62
LINC01961-201ENST00000449954 TMC1Q8TDI8 760 aa11.2□□□□□ -0.62
LINC01961-201ENST00000449954 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
LINC01961-201ENST00000449954 NRXN2Q9P2S2 1712 aa11.2□□□□□ -0.62
LINC01961-201ENST00000449954 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
LINC01961-201ENST00000449954 KIF24Q5T7B8 1368 aa11.19□□□□□ -0.62
LINC01961-201ENST00000449954 DGKZQ13574 1117 aa11.19□□□□□ -0.62
LINC01961-201ENST00000449954 CAPNS2Q96L46 248 aa11.19□□□□□ -0.62
LINC01961-201ENST00000449954 NCAPD2Q15021 1401 aa11.18□□□□□ -0.62
LINC01961-201ENST00000449954 MYH14Q7Z406 1995 aaKnown RBP11.18□□□□□ -0.62
LINC01961-201ENST00000449954 TM4SF1P30408 202 aa11.18□□□□□ -0.62
LINC01961-201ENST00000449954 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
LINC01961-201ENST00000449954 GPR101Q96P66 508 aaPredicted RBP11.18□□□□□ -0.62
LINC01961-201ENST00000449954 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
LINC01961-201ENST00000449954 FLT4P35916 1363 aa11.17□□□□□ -0.62
LINC01961-201ENST00000449954 MAP2K2P36507 400 aa11.17□□□□□ -0.62
LINC01961-201ENST00000449954 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
LINC01961-201ENST00000449954 PAXIP1Q6ZW49 1069 aaPredicted RBP11.17□□□□□ -0.62
LINC01961-201ENST00000449954 PNMA8AQ86V59 439 aaPredicted RBP11.17□□□□□ -0.62
LINC01961-201ENST00000449954 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
LINC01961-201ENST00000449954 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
LINC01961-201ENST00000449954 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
LINC01961-201ENST00000449954 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
LINC01961-201ENST00000449954 AFDNP55196 1824 aaKnown RBP11.16□□□□□ -0.62
LINC01961-201ENST00000449954 H0YIN7 160 aa11.16□□□□□ -0.62
LINC01961-201ENST00000449954 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
LINC01961-201ENST00000449954 CNTROBQ8N137 903 aa11.16□□□□□ -0.62
LINC01961-201ENST00000449954 TSKSQ9UJT2 592 aa11.16□□□□□ -0.62
LINC01961-201ENST00000449954 ADAMTS7Q9UKP4 1686 aa11.16□□□□□ -0.62
LINC01961-201ENST00000449954 CRKLP46109 303 aaKnown RBP11.15□□□□□ -0.62
LINC01961-201ENST00000449954 SOX10P56693 466 aa11.15□□□□□ -0.62
LINC01961-201ENST00000449954 C2CD5Q86YS7 1000 aa11.15□□□□□ -0.62
LINC01961-201ENST00000449954 IFNL2Q8IZJ0 200 aa11.15□□□□□ -0.62
LINC01961-201ENST00000449954 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
LINC01961-201ENST00000449954 HACL1Q9UJ83 578 aa11.15□□□□□ -0.62
LINC01961-201ENST00000449954 PDZRN3Q9UPQ7 1066 aa11.15□□□□□ -0.62
LINC01961-201ENST00000449954 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
LINC01961-201ENST00000449954 ZPR1O75312 459 aa11.14□□□□□ -0.63
LINC01961-201ENST00000449954 HOXB1P14653 301 aaPredicted RBP11.14□□□□□ -0.63
LINC01961-201ENST00000449954 PHKG2P15735 406 aa11.14□□□□□ -0.63
LINC01961-201ENST00000449954 FBLN1P23142 703 aa11.14□□□□□ -0.63
LINC01961-201ENST00000449954 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC01961-201ENST00000449954 TONSLQ96HA7 1378 aa11.14□□□□□ -0.63
LINC01961-201ENST00000449954 CASP8AP2Q9UKL3 1982 aa11.14□□□□□ -0.63
LINC01961-201ENST00000449954 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
LINC01961-201ENST00000449954 EPHX2P34913 555 aa11.13□□□□□ -0.63
LINC01961-201ENST00000449954 BRPF1P55201 1214 aaPredicted RBP11.13□□□□□ -0.63
LINC01961-201ENST00000449954 GRM1Q13255 1194 aa11.13□□□□□ -0.63
LINC01961-201ENST00000449954 HSP90AB2PQ58FF8 381 aa11.13□□□□□ -0.63
LINC01961-201ENST00000449954 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
LINC01961-201ENST00000449954 CYP4F22Q6NT55 531 aa11.13□□□□□ -0.63
LINC01961-201ENST00000449954 NBPF15Q8N660 670 aa11.13□□□□□ -0.63
LINC01961-201ENST00000449954 PUS7Q96PZ0 661 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms