RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 RAB3GAP1Q15042 981 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 PAF1Q8N7H5 531 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 SKIDA1Q1XH10 827 aa16.16■□□□□ 0.18
ITGB4-202ENST00000449880 SKAP1Q86WV1 359 aa16.16■□□□□ 0.18
ITGB4-202ENST00000449880 DYDC1Q8WWB3 177 aa16.16■□□□□ 0.18
ITGB4-202ENST00000449880 TRIM27P14373 513 aa16.16■□□□□ 0.18
ITGB4-202ENST00000449880 TBC1D9Q6ZT07 1266 aa16.16■□□□□ 0.18
ITGB4-202ENST00000449880 LUZP1Q86V48 1076 aa16.16■□□□□ 0.18
ITGB4-202ENST00000449880 KDM6BO15054 1643 aa16.15■□□□□ 0.18
ITGB4-202ENST00000449880 DDX54Q8TDD1 881 aaKnown RBP16.15■□□□□ 0.18
ITGB4-202ENST00000449880 KIF1BPQ96EK5 621 aa16.15■□□□□ 0.18
ITGB4-202ENST00000449880 LRRFIP2Q9Y608 721 aaKnown RBP16.15■□□□□ 0.18
ITGB4-202ENST00000449880 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
ITGB4-202ENST00000449880 PPIP5K1Q6PFW1 1433 aa16.15■□□□□ 0.18
ITGB4-202ENST00000449880 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
ITGB4-202ENST00000449880 MYO5CQ9NQX4 1742 aa16.15■□□□□ 0.18
ITGB4-202ENST00000449880 STX6O43752 255 aa16.14■□□□□ 0.18
ITGB4-202ENST00000449880 ATP2B2Q01814 1243 aa16.14■□□□□ 0.18
ITGB4-202ENST00000449880 SEPT7Q16181 437 aaKnown RBP16.14■□□□□ 0.18
ITGB4-202ENST00000449880 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.18
ITGB4-202ENST00000449880 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.18
ITGB4-202ENST00000449880 KDM4AO75164 1064 aa16.14■□□□□ 0.17
ITGB4-202ENST00000449880 LMAN1P49257 510 aa16.14■□□□□ 0.17
ITGB4-202ENST00000449880 TAF7Q15545 349 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-202ENST00000449880 CWC27Q6UX04 472 aaKnown RBP16.14■□□□□ 0.17
ITGB4-202ENST00000449880 DNAAF4Q8WXU2 420 aa16.14■□□□□ 0.17
ITGB4-202ENST00000449880 CCDC69A6NI79 296 aa16.14■□□□□ 0.17
ITGB4-202ENST00000449880 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.17
ITGB4-202ENST00000449880 SPA17Q15506 151 aa16.14■□□□□ 0.17
ITGB4-202ENST00000449880 SOGA3Q5TF21 947 aa16.14■□□□□ 0.17
ITGB4-202ENST00000449880 PANK2Q9BZ23 570 aa16.14■□□□□ 0.17
ITGB4-202ENST00000449880 PRDM11Q9NQV5 511 aa16.14■□□□□ 0.17
ITGB4-202ENST00000449880 MYL6BP14649 208 aa16.13■□□□□ 0.17
ITGB4-202ENST00000449880 ENOX2Q16206 610 aaKnown RBP16.13■□□□□ 0.17
ITGB4-202ENST00000449880 MBD5Q9P267 1494 aa16.13■□□□□ 0.17
ITGB4-202ENST00000449880 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
ITGB4-202ENST00000449880 ANAPC15P60006 121 aa16.13■□□□□ 0.17
ITGB4-202ENST00000449880 USHBP1Q8N6Y0 703 aa16.13■□□□□ 0.17
ITGB4-202ENST00000449880 V9GYY5 206 aaPredicted RBP16.13■□□□□ 0.17
ITGB4-202ENST00000449880 GABPB1Q06547 395 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-202ENST00000449880 SRGAP3O43295 1099 aa16.12■□□□□ 0.17
ITGB4-202ENST00000449880 SLU7O95391 586 aaKnown RBP16.12■□□□□ 0.17
ITGB4-202ENST00000449880 NUCB1Q02818 461 aa16.12■□□□□ 0.17
ITGB4-202ENST00000449880 EHBP1Q8NDI1 1231 aa16.12■□□□□ 0.17
ITGB4-202ENST00000449880 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
ITGB4-202ENST00000449880 NUTM2BA6NNL0 878 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-202ENST00000449880 NUTM2EB1AL46 878 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-202ENST00000449880 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-202ENST00000449880 MBIPQ9NS73 344 aa16.12■□□□□ 0.17
ITGB4-202ENST00000449880 FBLN1P23142 703 aa16.12■□□□□ 0.17
ITGB4-202ENST00000449880 ZNF165P49910 485 aa16.12■□□□□ 0.17
ITGB4-202ENST00000449880 AACSQ86V21 672 aa16.12■□□□□ 0.17
ITGB4-202ENST00000449880 ARFGAP3Q9NP61 516 aa16.12■□□□□ 0.17
ITGB4-202ENST00000449880 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
ITGB4-202ENST00000449880 TTC22Q5TAA0 569 aa16.11■□□□□ 0.17
ITGB4-202ENST00000449880 NAA15Q9BXJ9 866 aaKnown RBP16.11■□□□□ 0.17
ITGB4-202ENST00000449880 TUBBP07437 444 aa16.11■□□□□ 0.17
ITGB4-202ENST00000449880 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
ITGB4-202ENST00000449880 GIGYF2Q6Y7W6 1299 aaKnown RBP16.11■□□□□ 0.17
ITGB4-202ENST00000449880 GPATCH11Q8N954 259 aa16.11■□□□□ 0.17
ITGB4-202ENST00000449880 SAMD9LQ8IVG5 1584 aa16.11■□□□□ 0.17
ITGB4-202ENST00000449880 IGHDP01880 384 aa16.11■□□□□ 0.17
ITGB4-202ENST00000449880 RBM27Q9P2N5 1060 aaKnown RBP16.11■□□□□ 0.17
ITGB4-202ENST00000449880 PTPRCP08575 1304 aa16.11■□□□□ 0.17
ITGB4-202ENST00000449880 EZRP15311 586 aaKnown RBP16.1■□□□□ 0.17
ITGB4-202ENST00000449880 ABCC1P33527 1531 aa16.1■□□□□ 0.17
ITGB4-202ENST00000449880 CEP126Q9P2H0 1117 aa16.1■□□□□ 0.17
ITGB4-202ENST00000449880 USO1O60763 962 aaKnown RBP16.1■□□□□ 0.17
ITGB4-202ENST00000449880 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
ITGB4-202ENST00000449880 YEATS4O95619 227 aa16.1■□□□□ 0.17
ITGB4-202ENST00000449880 ZSCAN22P10073 491 aaPredicted RBP16.1■□□□□ 0.17
ITGB4-202ENST00000449880 TMC6Q7Z403 805 aa16.1■□□□□ 0.17
ITGB4-202ENST00000449880 SIL1Q9H173 461 aa16.1■□□□□ 0.17
ITGB4-202ENST00000449880 TRMT1Q9NXH9 659 aaKnown RBP16.1■□□□□ 0.17
ITGB4-202ENST00000449880 NEFHP12036 1026 aa16.09■□□□□ 0.17
ITGB4-202ENST00000449880 MAP2K1Q02750 393 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-202ENST00000449880 CKAP4Q07065 602 aaKnown RBP16.09■□□□□ 0.17
ITGB4-202ENST00000449880 ZSCAN16Q9H4T2 348 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-202ENST00000449880 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-202ENST00000449880 MAP4K4O95819 1239 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-202ENST00000449880 TTC21AQ8NDW8 1320 aa16.09■□□□□ 0.17
ITGB4-202ENST00000449880 FAM83GA6ND36 823 aa16.09■□□□□ 0.17
ITGB4-202ENST00000449880 NF2P35240 595 aa16.09■□□□□ 0.17
ITGB4-202ENST00000449880 RBM5P52756 815 aaKnown RBP eCLIP16.09■□□□□ 0.17
ITGB4-202ENST00000449880 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-202ENST00000449880 GCOM1H8Y6P7 765 aaPredicted RBP16.08■□□□□ 0.17
ITGB4-202ENST00000449880 MYZAPP0CAP1 466 aa16.08■□□□□ 0.17
ITGB4-202ENST00000449880 YTHDC2Q9H6S0 1430 aaKnown RBP16.08■□□□□ 0.17
ITGB4-202ENST00000449880 GBP2P32456 591 aaPredicted RBP16.08■□□□□ 0.17
ITGB4-202ENST00000449880 A0A1W2PP64 1363 aa16.08■□□□□ 0.16
ITGB4-202ENST00000449880 MNAT1P51948 309 aa16.08■□□□□ 0.16
ITGB4-202ENST00000449880 TAX1BP1Q86VP1 789 aa16.08■□□□□ 0.16
ITGB4-202ENST00000449880 SMC1AQ14683 1233 aaKnown RBP16.08■□□□□ 0.16
ITGB4-202ENST00000449880 RNF187Q5TA31 235 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-202ENST00000449880 ARHGAP45Q92619 1136 aa16.08■□□□□ 0.16
ITGB4-202ENST00000449880 NPC1L1Q9UHC9 1359 aa16.08■□□□□ 0.16
ITGB4-202ENST00000449880 FOXO3O43524 673 aa16.08■□□□□ 0.16
ITGB4-202ENST00000449880 RRAGDQ9NQL2 400 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-202ENST00000449880 HCLS1P14317 486 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms