RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 EAPPQ56P03 285 aaPredicted RBP18.58■□□□□ 0.56
CPSF7-207ENST00000449811 NPM2Q86SE8 214 aaKnown RBP18.58■□□□□ 0.56
CPSF7-207ENST00000449811 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.56
CPSF7-207ENST00000449811 SCN4AP35499 1836 aa18.58■□□□□ 0.56
CPSF7-207ENST00000449811 HSPA5P11021 654 aaKnown RBP18.57■□□□□ 0.56
CPSF7-207ENST00000449811 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
CPSF7-207ENST00000449811 CCDC93Q567U6 631 aa18.56■□□□□ 0.56
CPSF7-207ENST00000449811 ZNF790Q6PG37 636 aa18.56■□□□□ 0.56
CPSF7-207ENST00000449811 CLEC11AQ9Y240 323 aa18.56■□□□□ 0.56
CPSF7-207ENST00000449811 CACNA1SQ13698 1873 aa18.56■□□□□ 0.56
CPSF7-207ENST00000449811 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
CPSF7-207ENST00000449811 ZNF541Q9H0D2 1346 aa18.55■□□□□ 0.56
CPSF7-207ENST00000449811 TEFQ10587 303 aa18.55■□□□□ 0.56
CPSF7-207ENST00000449811 HACL1Q9UJ83 578 aa18.55■□□□□ 0.56
CPSF7-207ENST00000449811 A1BGP04217 495 aa18.54■□□□□ 0.56
CPSF7-207ENST00000449811 AMER1Q5JTC6 1135 aaPredicted RBP18.54■□□□□ 0.56
CPSF7-207ENST00000449811 C7orf43Q8WVR3 580 aa18.54■□□□□ 0.56
CPSF7-207ENST00000449811 ABHD8Q96I13 439 aa18.54■□□□□ 0.56
CPSF7-207ENST00000449811 RASSF10A6NK89 507 aa18.53■□□□□ 0.56
CPSF7-207ENST00000449811 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
CPSF7-207ENST00000449811 HSPA8P11142 646 aaKnown RBP18.53■□□□□ 0.56
CPSF7-207ENST00000449811 EPHX2P34913 555 aa18.53■□□□□ 0.56
CPSF7-207ENST00000449811 FKBP4Q02790 459 aaKnown RBP eCLIP18.53■□□□□ 0.56
CPSF7-207ENST00000449811 DEFB115Q30KQ5 88 aa18.53■□□□□ 0.56
CPSF7-207ENST00000449811 FAM161AQ3B820 660 aa18.53■□□□□ 0.56
CPSF7-207ENST00000449811 FMNL2Q96PY5 1086 aa18.53■□□□□ 0.56
CPSF7-207ENST00000449811 ZNF277Q9NRM2 450 aaPredicted RBP18.53■□□□□ 0.56
CPSF7-207ENST00000449811 MAP1SQ66K74 1059 aaPredicted RBP18.52■□□□□ 0.56
CPSF7-207ENST00000449811 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.56
CPSF7-207ENST00000449811 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
CPSF7-207ENST00000449811 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
CPSF7-207ENST00000449811 IL17REQ8NFR9 667 aa18.52■□□□□ 0.56
CPSF7-207ENST00000449811 RNF123Q5XPI4 1314 aa18.51■□□□□ 0.55
CPSF7-207ENST00000449811 ADAMTSL1Q8N6G6 1762 aa18.51■□□□□ 0.55
CPSF7-207ENST00000449811 NPR1P16066 1061 aa18.51■□□□□ 0.55
CPSF7-207ENST00000449811 MAP2K1Q02750 393 aaPredicted RBP18.51■□□□□ 0.55
CPSF7-207ENST00000449811 CNTROBQ8N137 903 aa18.51■□□□□ 0.55
CPSF7-207ENST00000449811 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
CPSF7-207ENST00000449811 BCORQ6W2J9 1755 aa18.5■□□□□ 0.55
CPSF7-207ENST00000449811 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
CPSF7-207ENST00000449811 OLFM4Q6UX06 510 aa18.49■□□□□ 0.55
CPSF7-207ENST00000449811 RTKN2Q8IZC4 609 aa18.49■□□□□ 0.55
CPSF7-207ENST00000449811 GAS2L2Q8NHY3 880 aa18.49■□□□□ 0.55
CPSF7-207ENST00000449811 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
CPSF7-207ENST00000449811 KLRG2A4D1S0 409 aaPredicted RBP18.48■□□□□ 0.55
CPSF7-207ENST00000449811 FZD9O00144 591 aa18.48■□□□□ 0.55
CPSF7-207ENST00000449811 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
CPSF7-207ENST00000449811 ZNF652Q9Y2D9 606 aa18.48■□□□□ 0.55
CPSF7-207ENST00000449811 SIPA1L3O60292 1781 aaPredicted RBP18.47■□□□□ 0.55
CPSF7-207ENST00000449811 IARSP41252 1262 aaKnown RBP18.47■□□□□ 0.55
CPSF7-207ENST00000449811 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
CPSF7-207ENST00000449811 GPC2Q8N158 579 aa18.47■□□□□ 0.55
CPSF7-207ENST00000449811 KCNQ3O43525 872 aa18.46■□□□□ 0.55
CPSF7-207ENST00000449811 TPTE2Q6XPS3 522 aa18.46■□□□□ 0.55
CPSF7-207ENST00000449811 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
CPSF7-207ENST00000449811 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
CPSF7-207ENST00000449811 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
CPSF7-207ENST00000449811 USP16Q9Y5T5 823 aa18.45■□□□□ 0.54
CPSF7-207ENST00000449811 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
CPSF7-207ENST00000449811 U2SURPO15042 1029 aaKnown RBP18.44■□□□□ 0.54
CPSF7-207ENST00000449811 BEGAINQ9BUH8 593 aa18.44■□□□□ 0.54
CPSF7-207ENST00000449811 NIP7Q9Y221 180 aaKnown RBP eCLIP18.44■□□□□ 0.54
CPSF7-207ENST00000449811 CLSPNQ9HAW4 1339 aa18.44■□□□□ 0.54
CPSF7-207ENST00000449811 CCDC85CA6NKD9 419 aa18.43■□□□□ 0.54
CPSF7-207ENST00000449811 ALDH1B1P30837 517 aa18.43■□□□□ 0.54
CPSF7-207ENST00000449811 MLLT1Q03111 559 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-207ENST00000449811 CC2D1BQ5T0F9 858 aaKnown RBP18.43■□□□□ 0.54
CPSF7-207ENST00000449811 PAXIP1Q6ZW49 1069 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-207ENST00000449811 JDP2Q8WYK2 163 aa18.43■□□□□ 0.54
CPSF7-207ENST00000449811 CAPNS2Q96L46 248 aa18.43■□□□□ 0.54
CPSF7-207ENST00000449811 PRAMEF22A3QJZ6 481 aa18.42■□□□□ 0.54
CPSF7-207ENST00000449811 FAM177BA6PVY3 158 aa18.42■□□□□ 0.54
CPSF7-207ENST00000449811 ECE1P42892 770 aa18.42■□□□□ 0.54
CPSF7-207ENST00000449811 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
CPSF7-207ENST00000449811 GJA3Q9Y6H8 435 aa18.42■□□□□ 0.54
CPSF7-207ENST00000449811 THSD7BQ9C0I4 1608 aa18.41■□□□□ 0.54
CPSF7-207ENST00000449811 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
CPSF7-207ENST00000449811 LMOD1P29536 600 aaPredicted RBP18.41■□□□□ 0.54
CPSF7-207ENST00000449811 EIF6P56537 245 aaKnown RBP18.41■□□□□ 0.54
CPSF7-207ENST00000449811 GRM1Q13255 1194 aa18.41■□□□□ 0.54
CPSF7-207ENST00000449811 PSMD1Q99460 953 aa18.41■□□□□ 0.54
CPSF7-207ENST00000449811 RGL2O15211 777 aa18.4■□□□□ 0.54
CPSF7-207ENST00000449811 SNRPA1P09661 255 aaKnown RBP18.4■□□□□ 0.54
CPSF7-207ENST00000449811 GTF2E1P29083 439 aaPredicted RBP18.4■□□□□ 0.54
CPSF7-207ENST00000449811 GPR101Q96P66 508 aaPredicted RBP18.4■□□□□ 0.54
CPSF7-207ENST00000449811 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
CPSF7-207ENST00000449811 RGS19P49795 217 aa18.39■□□□□ 0.53
CPSF7-207ENST00000449811 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
CPSF7-207ENST00000449811 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
CPSF7-207ENST00000449811 SCNN1DP51172 638 aa18.38■□□□□ 0.53
CPSF7-207ENST00000449811 LTBP1Q14766 1721 aa18.37■□□□□ 0.53
CPSF7-207ENST00000449811 NBPF26B4DH59 902 aa18.37■□□□□ 0.53
CPSF7-207ENST00000449811 PER1O15534 1290 aaPredicted RBP18.37■□□□□ 0.53
CPSF7-207ENST00000449811 EPS15P42566 896 aa18.37■□□□□ 0.53
CPSF7-207ENST00000449811 CC2D2BQ6DHV5 1058 aa18.37■□□□□ 0.53
CPSF7-207ENST00000449811 NBPF10Q6P3W6 841 aaKnown RBP18.37■□□□□ 0.53
CPSF7-207ENST00000449811 NBPF15Q8N660 670 aa18.37■□□□□ 0.53
CPSF7-207ENST00000449811 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
CPSF7-207ENST00000449811 KIF7Q2M1P5 1343 aa18.37■□□□□ 0.53
CPSF7-207ENST00000449811 COL4A5P29400 1685 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms