RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 KIAA1328Q86T90 577 aa11.86□□□□□ -0.51
SCN10A-201ENST00000449082 FGFR1OPO95684 399 aaKnown RBP11.86□□□□□ -0.51
SCN10A-201ENST00000449082 CHMP4BP1P59074 171 aa11.86□□□□□ -0.51
SCN10A-201ENST00000449082 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
SCN10A-201ENST00000449082 KIF20AO95235 890 aa11.86□□□□□ -0.51
SCN10A-201ENST00000449082 TAF4BQ92750 862 aa11.86□□□□□ -0.51
SCN10A-201ENST00000449082 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 LIMCH1Q9UPQ0 1083 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 CFAP100Q494V2 611 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 FKBP15Q5T1M5 1219 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 DISP3Q9P2K9 1392 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 CETN2P41208 172 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 GRPEL1Q9HAV7 217 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 CWC15Q9P013 229 aaKnown RBP11.85□□□□□ -0.51
SCN10A-201ENST00000449082 RIMS2Q9UQ26 1411 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 MCM4P33991 863 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 FAM177A1Q8N128 213 aaPredicted RBP11.85□□□□□ -0.51
SCN10A-201ENST00000449082 SETDB2Q96T68 719 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 PPIP5K1Q6PFW1 1433 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 ERLIN1O75477 346 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
SCN10A-201ENST00000449082 ZNF518AQ6AHZ1 1483 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 TSPY2A6NKD2 308 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 SSR1P43307 286 aaKnown RBP11.84□□□□□ -0.51
SCN10A-201ENST00000449082 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 CCDC112Q8NEF3 446 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 CRNKL1Q9BZJ0 848 aaKnown RBP11.84□□□□□ -0.51
SCN10A-201ENST00000449082 ANO10Q9NW15 660 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 TMEM67Q5HYA8 995 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 MFSD6Q6ZSS7 791 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 UBA5Q9GZZ9 404 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
SCN10A-201ENST00000449082 H0YHG0 523 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 AKAP4Q5JQC9 854 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 FILIP1Q7Z7B0 1213 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 ZGPATQ8N5A5 531 aaKnown RBP11.83□□□□□ -0.52
SCN10A-201ENST00000449082 RALGAPBQ86X10 1494 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 CAMK4Q16566 473 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 SNRKQ9NRH2 765 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 GUCY1B3Q02153 619 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 DDB1Q16531 1140 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 C20orf194Q5TEA3 1177 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
SCN10A-201ENST00000449082 ANKRD62A6NC57 917 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 SPA17Q15506 151 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 ARHGAP29Q52LW3 1261 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 NCOA7Q8NI08 942 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 HMG20BQ9P0W2 317 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 MPHOSPH6Q99547 160 aaKnown RBP11.82□□□□□ -0.52
SCN10A-201ENST00000449082 HDAC9Q9UKV0 1011 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 IARSP41252 1262 aaKnown RBP11.82□□□□□ -0.52
SCN10A-201ENST00000449082 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 CTAGE5O15320 804 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 CCT2P78371 535 aaKnown RBP11.82□□□□□ -0.52
SCN10A-201ENST00000449082 CALML4Q96GE6 196 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 ATP10BO94823 1461 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 KLHL10Q6JEL2 608 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 CACNA2D4Q7Z3S7 1137 aa11.82□□□□□ -0.52
SCN10A-201ENST00000449082 WDR7Q9Y4E6 1490 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 AMPD3Q01432 767 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 CCDC178Q5BJE1 867 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 XAGE3Q8WTP9 111 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 TCP11L1Q9NUJ3 509 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 USP16Q9Y5T5 823 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 CCDC183Q5T5S1 534 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 CCDC148Q8NFR7 591 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 NYXQ9GZU5 481 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 ARHGAP45Q92619 1136 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 ZFYP08048 801 aaPredicted RBP11.81□□□□□ -0.52
SCN10A-201ENST00000449082 LEKR1Q6ZMV7 388 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 CNNM3Q8NE01 707 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 NEK1Q96PY6 1258 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 PYM1Q9BRP8 204 aaKnown RBP11.81□□□□□ -0.52
SCN10A-201ENST00000449082 VAT1LQ9HCJ6 419 aa11.81□□□□□ -0.52
SCN10A-201ENST00000449082 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
SCN10A-201ENST00000449082 IL2RBP14784 551 aa11.8□□□□□ -0.52
SCN10A-201ENST00000449082 GBP2P32456 591 aaPredicted RBP11.8□□□□□ -0.52
SCN10A-201ENST00000449082 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
SCN10A-201ENST00000449082 COPS6Q7L5N1 327 aa11.8□□□□□ -0.52
SCN10A-201ENST00000449082 MPNDQ8N594 471 aa11.8□□□□□ -0.52
SCN10A-201ENST00000449082 ANXA1P04083 346 aa11.8□□□□□ -0.52
SCN10A-201ENST00000449082 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
SCN10A-201ENST00000449082 METAP2P50579 478 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCN10A-201ENST00000449082 SYCE3A1L190 88 aa11.8□□□□□ -0.52
SCN10A-201ENST00000449082 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
SCN10A-201ENST00000449082 C19orf44Q9H6X5 657 aa11.8□□□□□ -0.52
SCN10A-201ENST00000449082 ENOX2Q16206 610 aaKnown RBP11.8□□□□□ -0.52
SCN10A-201ENST00000449082 STXBP4Q6ZWJ1 553 aa11.8□□□□□ -0.52
SCN10A-201ENST00000449082 TRAF1Q13077 416 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms