RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 SCN7AQ01118 1682 aa24.21■■□□□ 1.47
CHCHD3-203ENST00000448878 FER1L6Q2WGJ9 1857 aa24.2■■□□□ 1.46
CHCHD3-203ENST00000448878 LTBP3Q9NS15 1303 aa24.2■■□□□ 1.46
CHCHD3-203ENST00000448878 KCNQ3O43525 872 aa24.2■■□□□ 1.46
CHCHD3-203ENST00000448878 SRGNP10124 158 aa24.2■■□□□ 1.46
CHCHD3-203ENST00000448878 SOGA3Q5TF21 947 aa24.2■■□□□ 1.46
CHCHD3-203ENST00000448878 CREBZFQ9NS37 354 aa24.2■■□□□ 1.46
CHCHD3-203ENST00000448878 COL11A2P13942 1736 aaPredicted RBP24.2■■□□□ 1.46
CHCHD3-203ENST00000448878 DICER1Q9UPY3 1922 aaKnown RBP24.2■■□□□ 1.46
CHCHD3-203ENST00000448878 CACNA1SQ13698 1873 aa24.19■■□□□ 1.46
CHCHD3-203ENST00000448878 NBPF5PQ86XG9 351 aaPredicted RBP24.19■■□□□ 1.46
CHCHD3-203ENST00000448878 USP16Q9Y5T5 823 aa24.18■■□□□ 1.46
CHCHD3-203ENST00000448878 SLX4Q8IY92 1834 aa24.17■■□□□ 1.46
CHCHD3-203ENST00000448878 IQCA1LA6NCM1 817 aa24.17■■□□□ 1.46
CHCHD3-203ENST00000448878 FAM177BA6PVY3 158 aa24.16■■□□□ 1.46
CHCHD3-203ENST00000448878 PRKAR2BP31323 418 aa24.15■■□□□ 1.46
CHCHD3-203ENST00000448878 CCDC93Q567U6 631 aa24.15■■□□□ 1.46
CHCHD3-203ENST00000448878 EAPPQ56P03 285 aaPredicted RBP24.15■■□□□ 1.46
CHCHD3-203ENST00000448878 CLEC11AQ9Y240 323 aa24.15■■□□□ 1.46
CHCHD3-203ENST00000448878 ZNF652Q9Y2D9 606 aa24.15■■□□□ 1.46
CHCHD3-203ENST00000448878 PRAMEF22A3QJZ6 481 aa24.14■■□□□ 1.45
CHCHD3-203ENST00000448878 PHACTR3Q96KR7 559 aa24.14■■□□□ 1.45
CHCHD3-203ENST00000448878 LDHDQ86WU2 507 aa24.13■■□□□ 1.45
CHCHD3-203ENST00000448878 RTF1Q92541 710 aaKnown RBP24.13■■□□□ 1.45
CHCHD3-203ENST00000448878 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
CHCHD3-203ENST00000448878 SIPA1L3O60292 1781 aaPredicted RBP24.13■■□□□ 1.45
CHCHD3-203ENST00000448878 NPR1P16066 1061 aa24.12■■□□□ 1.45
CHCHD3-203ENST00000448878 TPTE2Q6XPS3 522 aa24.12■■□□□ 1.45
CHCHD3-203ENST00000448878 TAF1DQ9H5J8 278 aaPredicted RBP24.12■■□□□ 1.45
CHCHD3-203ENST00000448878 ZNF277Q9NRM2 450 aaPredicted RBP24.12■■□□□ 1.45
CHCHD3-203ENST00000448878 COL3A1P02461 1466 aaPredicted RBP24.12■■□□□ 1.45
CHCHD3-203ENST00000448878 SNRPA1P09661 255 aaKnown RBP24.11■■□□□ 1.45
CHCHD3-203ENST00000448878 GTF2E1P29083 439 aaPredicted RBP24.11■■□□□ 1.45
CHCHD3-203ENST00000448878 CLEC4GQ6UXB4 293 aa24.11■■□□□ 1.45
CHCHD3-203ENST00000448878 NIP7Q9Y221 180 aaKnown RBP eCLIP24.11■■□□□ 1.45
CHCHD3-203ENST00000448878 CEMIPQ8WUJ3 1361 aa24.11■■□□□ 1.45
CHCHD3-203ENST00000448878 FKBP4Q02790 459 aaKnown RBP eCLIP24.1■■□□□ 1.45
CHCHD3-203ENST00000448878 MCM10Q7L590 875 aa24.1■■□□□ 1.45
CHCHD3-203ENST00000448878 AIDAQ96BJ3 306 aa24.1■■□□□ 1.45
CHCHD3-203ENST00000448878 FOXN1O15353 648 aa24.09■■□□□ 1.45
CHCHD3-203ENST00000448878 NUDCQ9Y266 331 aa24.09■■□□□ 1.45
CHCHD3-203ENST00000448878 BCORQ6W2J9 1755 aa24.08■■□□□ 1.45
CHCHD3-203ENST00000448878 CNTNAP1P78357 1384 aa24.08■■□□□ 1.45
CHCHD3-203ENST00000448878 TMEM88BA6NKF7 163 aa24.08■■□□□ 1.45
CHCHD3-203ENST00000448878 OLFM4Q6UX06 510 aa24.08■■□□□ 1.45
CHCHD3-203ENST00000448878 C7orf43Q8WVR3 580 aa24.08■■□□□ 1.45
CHCHD3-203ENST00000448878 L3MBTL3Q96JM7 780 aaPredicted RBP24.08■■□□□ 1.45
CHCHD3-203ENST00000448878 RSPH6AQ9H0K4 717 aa24.08■■□□□ 1.45
CHCHD3-203ENST00000448878 HACL1Q9UJ83 578 aa24.08■■□□□ 1.45
CHCHD3-203ENST00000448878 U2AF1L5P0DN76 240 aaPredicted RBP24.07■■□□□ 1.44
CHCHD3-203ENST00000448878 U2AF1Q01081 240 aaKnown RBP eCLIP24.07■■□□□ 1.44
CHCHD3-203ENST00000448878 RTKN2Q8IZC4 609 aa24.07■■□□□ 1.44
CHCHD3-203ENST00000448878 PASKQ96RG2 1323 aa24.07■■□□□ 1.44
CHCHD3-203ENST00000448878 ZNF541Q9H0D2 1346 aa24.07■■□□□ 1.44
CHCHD3-203ENST00000448878 ARFGEF2Q9Y6D5 1785 aa24.06■■□□□ 1.44
CHCHD3-203ENST00000448878 DCTN1Q14203 1278 aa24.06■■□□□ 1.44
CHCHD3-203ENST00000448878 ALDH1B1P30837 517 aa24.05■■□□□ 1.44
CHCHD3-203ENST00000448878 EPHX2P34913 555 aa24.05■■□□□ 1.44
CHCHD3-203ENST00000448878 VEGFBP49765 207 aa24.05■■□□□ 1.44
CHCHD3-203ENST00000448878 SYNE4Q8N205 404 aa24.05■■□□□ 1.44
CHCHD3-203ENST00000448878 NGEFQ8N5V2 710 aa24.05■■□□□ 1.44
CHCHD3-203ENST00000448878 SCN4AP35499 1836 aa24.05■■□□□ 1.44
CHCHD3-203ENST00000448878 NPC1L1Q9UHC9 1359 aa24.04■■□□□ 1.44
CHCHD3-203ENST00000448878 RNF123Q5XPI4 1314 aa24.04■■□□□ 1.44
CHCHD3-203ENST00000448878 ITGBL1O95965 494 aaPredicted RBP24.03■■□□□ 1.44
CHCHD3-203ENST00000448878 IARSP41252 1262 aaKnown RBP24.03■■□□□ 1.44
CHCHD3-203ENST00000448878 CTCFP49711 727 aaPredicted RBP24.03■■□□□ 1.44
CHCHD3-203ENST00000448878 NBPF26B4DH59 902 aa24.02■■□□□ 1.44
CHCHD3-203ENST00000448878 HLFQ16534 295 aa24.02■■□□□ 1.44
CHCHD3-203ENST00000448878 NBPF10Q6P3W6 841 aaKnown RBP24.02■■□□□ 1.44
CHCHD3-203ENST00000448878 PNMA8AQ86V59 439 aaPredicted RBP24.02■■□□□ 1.44
CHCHD3-203ENST00000448878 NBPF15Q8N660 670 aa24.02■■□□□ 1.44
CHCHD3-203ENST00000448878 JDP2Q8WYK2 163 aa24.02■■□□□ 1.44
CHCHD3-203ENST00000448878 KLRG2A4D1S0 409 aaPredicted RBP24.01■■□□□ 1.43
CHCHD3-203ENST00000448878 MAP1SQ66K74 1059 aaPredicted RBP24.01■■□□□ 1.43
CHCHD3-203ENST00000448878 CNTROBQ8N137 903 aa24.01■■□□□ 1.43
CHCHD3-203ENST00000448878 PRDM10Q9NQV6 1147 aa24.01■■□□□ 1.43
CHCHD3-203ENST00000448878 GJA3Q9Y6H8 435 aa24.01■■□□□ 1.43
CHCHD3-203ENST00000448878 DEFB115Q30KQ5 88 aa24■■□□□ 1.43
CHCHD3-203ENST00000448878 MIS18AQ9NYP9 233 aa24■■□□□ 1.43
CHCHD3-203ENST00000448878 ABT1Q9ULW3 272 aaKnown RBP23.99■■□□□ 1.43
CHCHD3-203ENST00000448878 LBX1P52954 281 aa23.98■■□□□ 1.43
CHCHD3-203ENST00000448878 EIF6P56537 245 aaKnown RBP23.98■■□□□ 1.43
CHCHD3-203ENST00000448878 TAF7Q15545 349 aaPredicted RBP23.98■■□□□ 1.43
CHCHD3-203ENST00000448878 NUTM1Q86Y26 1132 aa23.98■■□□□ 1.43
CHCHD3-203ENST00000448878 FZD9O00144 591 aa23.97■■□□□ 1.43
CHCHD3-203ENST00000448878 GPC2Q8N158 579 aa23.97■■□□□ 1.43
CHCHD3-203ENST00000448878 NYXQ9GZU5 481 aa23.97■■□□□ 1.43
CHCHD3-203ENST00000448878 LMOD1P29536 600 aaPredicted RBP23.96■■□□□ 1.43
CHCHD3-203ENST00000448878 RPGRQ92834 1020 aaKnown RBP23.96■■□□□ 1.43
CHCHD3-203ENST00000448878 WBP1LQ9NX94 342 aa23.96■■□□□ 1.43
CHCHD3-203ENST00000448878 RRP7AQ9Y3A4 280 aaKnown RBP23.96■■□□□ 1.43
CHCHD3-203ENST00000448878 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
CHCHD3-203ENST00000448878 PAXIP1Q6ZW49 1069 aaPredicted RBP23.95■■□□□ 1.42
CHCHD3-203ENST00000448878 RGL2O15211 777 aa23.94■■□□□ 1.42
CHCHD3-203ENST00000448878 HTATSF1O43719 755 aaKnown RBP23.94■■□□□ 1.42
CHCHD3-203ENST00000448878 NEFMP07197 916 aa23.94■■□□□ 1.42
CHCHD3-203ENST00000448878 GPTP24298 496 aa23.93■■□□□ 1.42
CHCHD3-203ENST00000448878 PPP2R1AP30153 589 aa23.93■■□□□ 1.42
CHCHD3-203ENST00000448878 GRM1Q13255 1194 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms