RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CDC45O75419 566 aa21.9■■□□□ 1.1
LMNA-208ENST00000448611 C22orf23Q9BZE7 217 aa21.9■■□□□ 1.1
LMNA-208ENST00000448611 CCDC9Q9Y3X0 531 aaKnown RBP21.9■■□□□ 1.1
LMNA-208ENST00000448611 RAB11FIP3O75154 756 aa21.89■■□□□ 1.09
LMNA-208ENST00000448611 PIGBQ92521 554 aa21.89■■□□□ 1.09
LMNA-208ENST00000448611 SURF6O75683 361 aaKnown RBP21.88■■□□□ 1.09
LMNA-208ENST00000448611 PDE1AP54750 535 aa21.88■■□□□ 1.09
LMNA-208ENST00000448611 MYD88Q99836 296 aa21.88■■□□□ 1.09
LMNA-208ENST00000448611 SPATA31A1Q5TZJ5 1347 aa21.88■■□□□ 1.09
LMNA-208ENST00000448611 EXOC5O00471 708 aa21.88■■□□□ 1.09
LMNA-208ENST00000448611 GCKRQ14397 625 aa21.88■■□□□ 1.09
LMNA-208ENST00000448611 KAZALD1Q96I82 304 aa21.88■■□□□ 1.09
LMNA-208ENST00000448611 ARFGEF2Q9Y6D5 1785 aa21.88■■□□□ 1.09
LMNA-208ENST00000448611 PLBD2Q8NHP8 589 aa21.87■■□□□ 1.09
LMNA-208ENST00000448611 SUCLG2Q96I99 432 aa21.87■■□□□ 1.09
LMNA-208ENST00000448611 ITGB4P16144 1822 aa21.86■■□□□ 1.09
LMNA-208ENST00000448611 CDCA7Q9BWT1 371 aaPredicted RBP21.86■■□□□ 1.09
LMNA-208ENST00000448611 SDSP20132 328 aa21.86■■□□□ 1.09
LMNA-208ENST00000448611 SLC4A3P48751 1232 aa21.86■■□□□ 1.09
LMNA-208ENST00000448611 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
LMNA-208ENST00000448611 ASAP1Q9ULH1 1129 aa21.86■■□□□ 1.09
LMNA-208ENST00000448611 THRAP3Q9Y2W1 955 aaKnown RBP21.86■■□□□ 1.09
LMNA-208ENST00000448611 A1BGP04217 495 aa21.85■■□□□ 1.09
LMNA-208ENST00000448611 BCL9O00512 1426 aa21.85■■□□□ 1.09
LMNA-208ENST00000448611 MX1P20591 662 aa21.84■■□□□ 1.09
LMNA-208ENST00000448611 VSIG10Q8N0Z9 540 aa21.84■■□□□ 1.09
LMNA-208ENST00000448611 RHPN1Q8TCX5 695 aa21.84■■□□□ 1.09
LMNA-208ENST00000448611 STAP2Q9UGK3 403 aa21.84■■□□□ 1.09
LMNA-208ENST00000448611 RBM25P49756 843 aaKnown RBP21.84■■□□□ 1.09
LMNA-208ENST00000448611 HSP90AB4PQ58FF6 505 aa21.84■■□□□ 1.09
LMNA-208ENST00000448611 DAXXQ9UER7 740 aaPredicted RBP21.84■■□□□ 1.09
LMNA-208ENST00000448611 VPS72Q15906 364 aa21.83■■□□□ 1.09
LMNA-208ENST00000448611 KIF1BPQ96EK5 621 aa21.83■■□□□ 1.09
LMNA-208ENST00000448611 BICC1Q9H694 974 aaKnown RBP21.83■■□□□ 1.09
LMNA-208ENST00000448611 IL1RAPL2Q9NP60 686 aa21.82■■□□□ 1.08
LMNA-208ENST00000448611 NUP188Q5SRE5 1749 aa21.82■■□□□ 1.08
LMNA-208ENST00000448611 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.82■■□□□ 1.08
LMNA-208ENST00000448611 TTLL7Q6ZT98 887 aa21.82■■□□□ 1.08
LMNA-208ENST00000448611 SPATA31A5Q5VU36 1347 aa21.82■■□□□ 1.08
LMNA-208ENST00000448611 SPATA31A7Q8IWB4 1347 aa21.82■■□□□ 1.08
LMNA-208ENST00000448611 TEX13AQ9BXU3 409 aaPredicted RBP21.81■■□□□ 1.08
LMNA-208ENST00000448611 TRPC5Q9UL62 973 aaPredicted RBP21.81■■□□□ 1.08
LMNA-208ENST00000448611 AOX1Q06278 1338 aa21.81■■□□□ 1.08
LMNA-208ENST00000448611 TUBGCP6Q96RT7 1819 aa21.81■■□□□ 1.08
LMNA-208ENST00000448611 TSHZ3Q63HK5 1081 aa21.8■■□□□ 1.08
LMNA-208ENST00000448611 QTRT2Q9H974 415 aaKnown RBP21.8■■□□□ 1.08
LMNA-208ENST00000448611 AFDNP55196 1824 aaKnown RBP21.8■■□□□ 1.08
LMNA-208ENST00000448611 COL15A1P39059 1388 aa21.8■■□□□ 1.08
LMNA-208ENST00000448611 ZNF772Q68DY9 489 aaPredicted RBP21.8■■□□□ 1.08
LMNA-208ENST00000448611 ATP5J2-PTCD1G3V325 749 aa21.79■■□□□ 1.08
LMNA-208ENST00000448611 EIF5BO60841 1220 aaKnown RBP21.79■■□□□ 1.08
LMNA-208ENST00000448611 BECN1Q14457 450 aa21.79■■□□□ 1.08
LMNA-208ENST00000448611 DNAJC10Q8IXB1 793 aa21.79■■□□□ 1.08
LMNA-208ENST00000448611 DDB1Q16531 1140 aa21.78■■□□□ 1.08
LMNA-208ENST00000448611 EPHA10Q5JZY3 1008 aa21.78■■□□□ 1.08
LMNA-208ENST00000448611 GJD4Q96KN9 370 aaPredicted RBP21.78■■□□□ 1.08
LMNA-208ENST00000448611 PA2G4Q9UQ80 394 aaKnown RBP21.78■■□□□ 1.08
LMNA-208ENST00000448611 CASP7P55210 303 aa21.77■■□□□ 1.08
LMNA-208ENST00000448611 BARGINQ6ZT62 677 aa21.77■■□□□ 1.08
LMNA-208ENST00000448611 NUTM1Q86Y26 1132 aa21.77■■□□□ 1.08
LMNA-208ENST00000448611 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
LMNA-208ENST00000448611 RBM42Q9BTD8 480 aaKnown RBP21.76■■□□□ 1.07
LMNA-208ENST00000448611 ATRNO75882 1429 aa21.76■■□□□ 1.07
LMNA-208ENST00000448611 A0A087WZG4 1122 aa21.76■■□□□ 1.07
LMNA-208ENST00000448611 OS9Q13438 667 aaPredicted RBP21.76■■□□□ 1.07
LMNA-208ENST00000448611 FAM98CQ17RN3 349 aaKnown RBP21.76■■□□□ 1.07
LMNA-208ENST00000448611 CASC1Q6TDU7 716 aa21.76■■□□□ 1.07
LMNA-208ENST00000448611 UBE3BQ7Z3V4 1068 aa21.76■■□□□ 1.07
LMNA-208ENST00000448611 ERC1Q8IUD2 1116 aa21.76■■□□□ 1.07
LMNA-208ENST00000448611 SLC4A9Q96Q91 983 aa21.76■■□□□ 1.07
LMNA-208ENST00000448611 PRIM1P49642 420 aaKnown RBP21.75■■□□□ 1.07
LMNA-208ENST00000448611 RABL6Q3YEC7 729 aaPredicted RBP21.75■■□□□ 1.07
LMNA-208ENST00000448611 TBC1D2Q9BYX2 928 aa21.75■■□□□ 1.07
LMNA-208ENST00000448611 ZBTB3Q9H5J0 574 aa21.75■■□□□ 1.07
LMNA-208ENST00000448611 STARD3NLO95772 234 aa21.74■■□□□ 1.07
LMNA-208ENST00000448611 JARID2Q92833 1246 aaPredicted RBP21.74■■□□□ 1.07
LMNA-208ENST00000448611 SYTL4Q96C24 671 aaPredicted RBP21.74■■□□□ 1.07
LMNA-208ENST00000448611 USP42Q9H9J4 1324 aaKnown RBP21.74■■□□□ 1.07
LMNA-208ENST00000448611 H7C1W4 665 aa21.74■■□□□ 1.07
LMNA-208ENST00000448611 MARCH10Q8NA82 808 aaPredicted RBP21.74■■□□□ 1.07
LMNA-208ENST00000448611 A0A0G2JS52 829 aa21.73■■□□□ 1.07
LMNA-208ENST00000448611 MYT1Q01538 1121 aa21.73■■□□□ 1.07
LMNA-208ENST00000448611 PI4K2BQ8TCG2 481 aa21.73■■□□□ 1.07
LMNA-208ENST00000448611 KIF2CQ99661 725 aa21.73■■□□□ 1.07
LMNA-208ENST00000448611 CLASRPQ8N2M8 674 aaKnown RBP21.72■■□□□ 1.07
LMNA-208ENST00000448611 CWC25Q9NXE8 425 aaPredicted RBP21.72■■□□□ 1.07
LMNA-208ENST00000448611 RGS17Q9UGC6 210 aaPredicted RBP21.72■■□□□ 1.07
LMNA-208ENST00000448611 TJP1Q07157 1748 aa21.72■■□□□ 1.07
LMNA-208ENST00000448611 SASH1O94885 1247 aa21.72■■□□□ 1.07
LMNA-208ENST00000448611 CYP19A1P11511 503 aaPredicted RBP21.71■■□□□ 1.07
LMNA-208ENST00000448611 RFX5P48382 616 aaPredicted RBP21.71■■□□□ 1.07
LMNA-208ENST00000448611 CCDC191Q8NCU4 936 aa21.71■■□□□ 1.07
LMNA-208ENST00000448611 G3BP1Q13283 466 aaKnown RBP eCLIP21.7■■□□□ 1.078e-9■■■□□ 15.6
LMNA-208ENST00000448611 USP26Q9BXU7 913 aa21.7■■□□□ 1.07
LMNA-208ENST00000448611 TTC41PQ6P2S7 1318 aa21.7■■□□□ 1.06
LMNA-208ENST00000448611 ISCA1Q9BUE6 129 aa21.7■■□□□ 1.06
LMNA-208ENST00000448611 COPRSQ9NQ92 184 aa21.7■■□□□ 1.06
LMNA-208ENST00000448611 TRIM6-TRIM34B2RNG4 842 aa21.69■■□□□ 1.06
LMNA-208ENST00000448611 KLHDC4Q8TBB5 520 aa21.69■■□□□ 1.06
LMNA-208ENST00000448611 FOXO4P98177 505 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms