RNA–Protein interactions for RNA: ENST00000448465.1

LINC00476-206, long intergenic non-protein coding RNA 476, humanhuman

TSL 3

Gene LINC00476, Length 290 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-206ENST00000448465 SCN4AP35499 1836 aa11.19□□□□□ -0.62
LINC00476-206ENST00000448465 ST5P78524 1137 aa11.18□□□□□ -0.62
LINC00476-206ENST00000448465 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
LINC00476-206ENST00000448465 STYK1Q6J9G0 422 aa11.18□□□□□ -0.62
LINC00476-206ENST00000448465 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
LINC00476-206ENST00000448465 CNBD1Q8NA66 436 aa11.18□□□□□ -0.62
LINC00476-206ENST00000448465 SETDB2Q96T68 719 aa11.18□□□□□ -0.62
LINC00476-206ENST00000448465 ITGBL1O95965 494 aaPredicted RBP11.17□□□□□ -0.62
LINC00476-206ENST00000448465 SRGNP10124 158 aa11.17□□□□□ -0.62
LINC00476-206ENST00000448465 FAM161AQ3B820 660 aa11.17□□□□□ -0.62
LINC00476-206ENST00000448465 MASTLQ96GX5 879 aa11.17□□□□□ -0.62
LINC00476-206ENST00000448465 ABHD8Q96I13 439 aa11.17□□□□□ -0.62
LINC00476-206ENST00000448465 L3MBTL3Q96JM7 780 aaPredicted RBP11.17□□□□□ -0.62
LINC00476-206ENST00000448465 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
LINC00476-206ENST00000448465 ARFGEF2Q9Y6D5 1785 aa11.17□□□□□ -0.62
LINC00476-206ENST00000448465 IL6STP40189 918 aaPredicted RBP11.16□□□□□ -0.62
LINC00476-206ENST00000448465 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
LINC00476-206ENST00000448465 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
LINC00476-206ENST00000448465 TEX13AQ9BXU3 409 aaPredicted RBP11.16□□□□□ -0.62
LINC00476-206ENST00000448465 HACL1Q9UJ83 578 aa11.16□□□□□ -0.62
LINC00476-206ENST00000448465 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
LINC00476-206ENST00000448465 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
LINC00476-206ENST00000448465 HSPA8P11142 646 aaKnown RBP11.15□□□□□ -0.62
LINC00476-206ENST00000448465 EPHX2P34913 555 aa11.15□□□□□ -0.62
LINC00476-206ENST00000448465 CCDC93Q567U6 631 aa11.15□□□□□ -0.62
LINC00476-206ENST00000448465 WDR33Q9C0J8 1336 aaKnown RBP11.14□□□□□ -0.63
LINC00476-206ENST00000448465 ZNF541Q9H0D2 1346 aa11.14□□□□□ -0.63
LINC00476-206ENST00000448465 RASSF10A6NK89 507 aa11.14□□□□□ -0.63
LINC00476-206ENST00000448465 A1BGP04217 495 aa11.14□□□□□ -0.63
LINC00476-206ENST00000448465 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC00476-206ENST00000448465 MAP2K1Q02750 393 aaPredicted RBP11.14□□□□□ -0.63
LINC00476-206ENST00000448465 TEFQ10587 303 aa11.14□□□□□ -0.63
LINC00476-206ENST00000448465 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
LINC00476-206ENST00000448465 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
LINC00476-206ENST00000448465 PNMA8AQ86V59 439 aaPredicted RBP11.14□□□□□ -0.63
LINC00476-206ENST00000448465 CNTROBQ8N137 903 aa11.14□□□□□ -0.63
LINC00476-206ENST00000448465 ABT1Q9ULW3 272 aaKnown RBP11.14□□□□□ -0.63
LINC00476-206ENST00000448465 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
LINC00476-206ENST00000448465 ADAMTSL1Q8N6G6 1762 aa11.13□□□□□ -0.63
LINC00476-206ENST00000448465 RNF123Q5XPI4 1314 aa11.13□□□□□ -0.63
LINC00476-206ENST00000448465 DIAPH1O60610 1272 aaKnown RBP11.13□□□□□ -0.63
LINC00476-206ENST00000448465 CAMTA2O94983 1202 aa11.13□□□□□ -0.63
LINC00476-206ENST00000448465 FKBP4Q02790 459 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC00476-206ENST00000448465 NBPF5PQ86XG9 351 aaPredicted RBP11.13□□□□□ -0.63
LINC00476-206ENST00000448465 DZIP3Q86Y13 1208 aaKnown RBP11.13□□□□□ -0.63
LINC00476-206ENST00000448465 C7orf43Q8WVR3 580 aa11.13□□□□□ -0.63
LINC00476-206ENST00000448465 ZNF277Q9NRM2 450 aaPredicted RBP11.13□□□□□ -0.63
LINC00476-206ENST00000448465 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
LINC00476-206ENST00000448465 CCDC85CA6NKD9 419 aa11.12□□□□□ -0.63
LINC00476-206ENST00000448465 SLC4A2P04920 1241 aa11.12□□□□□ -0.63
LINC00476-206ENST00000448465 HSPA5P11021 654 aaKnown RBP11.12□□□□□ -0.63
LINC00476-206ENST00000448465 NPR1P16066 1061 aa11.12□□□□□ -0.63
LINC00476-206ENST00000448465 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
LINC00476-206ENST00000448465 FMNL2Q96PY5 1086 aa11.12□□□□□ -0.63
LINC00476-206ENST00000448465 BCORQ6W2J9 1755 aa11.12□□□□□ -0.63
LINC00476-206ENST00000448465 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
LINC00476-206ENST00000448465 IARSP41252 1262 aaKnown RBP11.11□□□□□ -0.63
LINC00476-206ENST00000448465 MLLT1Q03111 559 aaPredicted RBP11.11□□□□□ -0.63
LINC00476-206ENST00000448465 GRM1Q13255 1194 aa11.11□□□□□ -0.63
LINC00476-206ENST00000448465 OLFM4Q6UX06 510 aa11.11□□□□□ -0.63
LINC00476-206ENST00000448465 RTKN2Q8IZC4 609 aa11.11□□□□□ -0.63
LINC00476-206ENST00000448465 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
LINC00476-206ENST00000448465 BEGAINQ9BUH8 593 aa11.11□□□□□ -0.63
LINC00476-206ENST00000448465 SIPA1L3O60292 1781 aaPredicted RBP11.11□□□□□ -0.63
LINC00476-206ENST00000448465 FZD9O00144 591 aa11.1□□□□□ -0.63
LINC00476-206ENST00000448465 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
LINC00476-206ENST00000448465 TPTE2Q6XPS3 522 aa11.1□□□□□ -0.63
LINC00476-206ENST00000448465 GPC2Q8N158 579 aa11.1□□□□□ -0.63
LINC00476-206ENST00000448465 DDX21Q9NR30 783 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00476-206ENST00000448465 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
LINC00476-206ENST00000448465 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 ECE1P42892 770 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 AMER1Q5JTC6 1135 aaPredicted RBP11.09□□□□□ -0.63
LINC00476-206ENST00000448465 CLEC4GQ6UXB4 293 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 SYNE4Q8N205 404 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 GAS2L2Q8NHY3 880 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 JDP2Q8WYK2 163 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 CAPNS2Q96L46 248 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 USP16Q9Y5T5 823 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 GJA3Q9Y6H8 435 aa11.09□□□□□ -0.63
LINC00476-206ENST00000448465 KLRG2A4D1S0 409 aaPredicted RBP11.08□□□□□ -0.64
LINC00476-206ENST00000448465 U2SURPO15042 1029 aaKnown RBP11.08□□□□□ -0.64
LINC00476-206ENST00000448465 KCNQ3O43525 872 aa11.08□□□□□ -0.64
LINC00476-206ENST00000448465 LMOD1P29536 600 aaPredicted RBP11.08□□□□□ -0.64
LINC00476-206ENST00000448465 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
LINC00476-206ENST00000448465 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
LINC00476-206ENST00000448465 GPR101Q96P66 508 aaPredicted RBP11.08□□□□□ -0.64
LINC00476-206ENST00000448465 NIP7Q9Y221 180 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC00476-206ENST00000448465 THSD7BQ9C0I4 1608 aa11.07□□□□□ -0.64
LINC00476-206ENST00000448465 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
LINC00476-206ENST00000448465 EIF6P56537 245 aaKnown RBP11.07□□□□□ -0.64
LINC00476-206ENST00000448465 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC00476-206ENST00000448465 CYP4F22Q6NT55 531 aa11.07□□□□□ -0.64
LINC00476-206ENST00000448465 PRAMEF22A3QJZ6 481 aa11.06□□□□□ -0.64
LINC00476-206ENST00000448465 RGS19P49795 217 aa11.06□□□□□ -0.64
LINC00476-206ENST00000448465 CC2D1BQ5T0F9 858 aaKnown RBP11.06□□□□□ -0.64
LINC00476-206ENST00000448465 PSMD1Q99460 953 aa11.06□□□□□ -0.64
LINC00476-206ENST00000448465 TSKSQ9UJT2 592 aa11.06□□□□□ -0.64
LINC00476-206ENST00000448465 CEMIPQ8WUJ3 1361 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms