RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 EAPPQ56P03 285 aaPredicted RBP9.71□□□□□ -0.86
LRRC28-203ENST00000447360 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.86
LRRC28-203ENST00000447360 PRPF40BQ6NWY9 871 aaKnown RBP9.71□□□□□ -0.86
LRRC28-203ENST00000447360 CNTROBQ8N137 903 aa9.71□□□□□ -0.86
LRRC28-203ENST00000447360 HACL1Q9UJ83 578 aa9.71□□□□□ -0.86
LRRC28-203ENST00000447360 AFDNP55196 1824 aaKnown RBP9.7□□□□□ -0.86
LRRC28-203ENST00000447360 SRGNP10124 158 aa9.7□□□□□ -0.86
LRRC28-203ENST00000447360 EPHX2P34913 555 aa9.7□□□□□ -0.86
LRRC28-203ENST00000447360 C7orf43Q8WVR3 580 aa9.7□□□□□ -0.86
LRRC28-203ENST00000447360 MASTLQ96GX5 879 aa9.7□□□□□ -0.86
LRRC28-203ENST00000447360 BEGAINQ9BUH8 593 aa9.7□□□□□ -0.86
LRRC28-203ENST00000447360 LGR6Q9HBX8 967 aa9.7□□□□□ -0.86
LRRC28-203ENST00000447360 CLEC11AQ9Y240 323 aa9.7□□□□□ -0.86
LRRC28-203ENST00000447360 RNMTO43148 476 aaKnown RBP9.69□□□□□ -0.86
LRRC28-203ENST00000447360 ECE1P42892 770 aa9.69□□□□□ -0.86
LRRC28-203ENST00000447360 CCDC93Q567U6 631 aa9.69□□□□□ -0.86
LRRC28-203ENST00000447360 CNBD1Q8NA66 436 aa9.69□□□□□ -0.86
LRRC28-203ENST00000447360 SETDB2Q96T68 719 aa9.69□□□□□ -0.86
LRRC28-203ENST00000447360 TEX13AQ9BXU3 409 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-203ENST00000447360 ABT1Q9ULW3 272 aaKnown RBP9.69□□□□□ -0.86
LRRC28-203ENST00000447360 FER1L6Q2WGJ9 1857 aa9.68□□□□□ -0.86
LRRC28-203ENST00000447360 CCDC88AQ3V6T2 1871 aa9.68□□□□□ -0.86
LRRC28-203ENST00000447360 NPHP1O15259 732 aa9.68□□□□□ -0.86
LRRC28-203ENST00000447360 IL13P35225 146 aa9.68□□□□□ -0.86
LRRC28-203ENST00000447360 ST5P78524 1137 aa9.68□□□□□ -0.86
LRRC28-203ENST00000447360 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
LRRC28-203ENST00000447360 MAP1SQ66K74 1059 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-203ENST00000447360 CCDC24Q8N4L8 307 aa9.68□□□□□ -0.86
LRRC28-203ENST00000447360 DDX21Q9NR30 783 aaKnown RBP eCLIP9.68□□□□□ -0.86
LRRC28-203ENST00000447360 DICER1Q9UPY3 1922 aaKnown RBP9.68□□□□□ -0.86
LRRC28-203ENST00000447360 SCN4AP35499 1836 aa9.68□□□□□ -0.86
LRRC28-203ENST00000447360 MRC1P22897 1456 aa9.67□□□□□ -0.86
LRRC28-203ENST00000447360 ZNF541Q9H0D2 1346 aa9.67□□□□□ -0.86
LRRC28-203ENST00000447360 FZD9O00144 591 aa9.67□□□□□ -0.86
LRRC28-203ENST00000447360 IL6STP40189 918 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-203ENST00000447360 RTKN2Q8IZC4 609 aa9.67□□□□□ -0.86
LRRC28-203ENST00000447360 GPC2Q8N158 579 aa9.67□□□□□ -0.86
LRRC28-203ENST00000447360 CAPNS2Q96L46 248 aa9.67□□□□□ -0.86
LRRC28-203ENST00000447360 GPR101Q96P66 508 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-203ENST00000447360 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
LRRC28-203ENST00000447360 VIRMAQ69YN4 1812 aaKnown RBP9.67□□□□□ -0.86
LRRC28-203ENST00000447360 TNRC18O15417 2968 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-203ENST00000447360 RNF123Q5XPI4 1314 aa9.66□□□□□ -0.86
LRRC28-203ENST00000447360 KLRG2A4D1S0 409 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-203ENST00000447360 CA12O43570 354 aa9.66□□□□□ -0.86
LRRC28-203ENST00000447360 NPR1P16066 1061 aa9.66□□□□□ -0.86
LRRC28-203ENST00000447360 MAP2K2P36507 400 aa9.66□□□□□ -0.86
LRRC28-203ENST00000447360 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
LRRC28-203ENST00000447360 TTC5Q8N0Z6 440 aa9.66□□□□□ -0.86
LRRC28-203ENST00000447360 ZNF277Q9NRM2 450 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-203ENST00000447360 CAMTA2O94983 1202 aa9.65□□□□□ -0.86
LRRC28-203ENST00000447360 MORC1Q86VD1 984 aa9.65□□□□□ -0.86
LRRC28-203ENST00000447360 ANKRD31Q8N7Z5 1873 aa9.64□□□□□ -0.87
LRRC28-203ENST00000447360 IARSP41252 1262 aaKnown RBP9.64□□□□□ -0.87
LRRC28-203ENST00000447360 CYP4F22Q6NT55 531 aa9.64□□□□□ -0.87
LRRC28-203ENST00000447360 ZNF790Q6PG37 636 aa9.64□□□□□ -0.87
LRRC28-203ENST00000447360 CLEC4GQ6UXB4 293 aa9.64□□□□□ -0.87
LRRC28-203ENST00000447360 PAXIP1Q6ZW49 1069 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-203ENST00000447360 ZNF496Q96IT1 587 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-203ENST00000447360 MCOLN1Q9GZU1 580 aa9.64□□□□□ -0.87
LRRC28-203ENST00000447360 ZNF330Q9Y3S2 320 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-203ENST00000447360 ADAMTSL1Q8N6G6 1762 aa9.64□□□□□ -0.87
LRRC28-203ENST00000447360 SCN11AQ9UI33 1791 aa9.64□□□□□ -0.87
LRRC28-203ENST00000447360 HEG1Q9ULI3 1381 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 SLX4Q8IY92 1834 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 COL11A2P13942 1736 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-203ENST00000447360 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-203ENST00000447360 ALDH1B1P30837 517 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
LRRC28-203ENST00000447360 CST9Q5W186 159 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 NBPF5PQ86XG9 351 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-203ENST00000447360 SYNE4Q8N205 404 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 JDP2Q8WYK2 163 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 CFAP44Q96MT7 982 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 PSMD1Q99460 953 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 PANK3Q9H999 370 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 TLL2Q9Y6L7 1015 aa9.63□□□□□ -0.87
LRRC28-203ENST00000447360 A1BGP04217 495 aa9.62□□□□□ -0.87
LRRC28-203ENST00000447360 EIF6P56537 245 aaKnown RBP9.62□□□□□ -0.87
LRRC28-203ENST00000447360 GRM1Q13255 1194 aa9.62□□□□□ -0.87
LRRC28-203ENST00000447360 TPTE2Q6XPS3 522 aa9.62□□□□□ -0.87
LRRC28-203ENST00000447360 USP50Q70EL3 339 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-203ENST00000447360 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
LRRC28-203ENST00000447360 HHIPL1Q96JK4 782 aa9.62□□□□□ -0.87
LRRC28-203ENST00000447360 POLR3GLQ9BT43 218 aa9.62□□□□□ -0.87
LRRC28-203ENST00000447360 ZNF652Q9Y2D9 606 aa9.62□□□□□ -0.87
LRRC28-203ENST00000447360 PDE4DIPQ5VU43 2346 aa9.62□□□□□ -0.87
LRRC28-203ENST00000447360 THSD7BQ9C0I4 1608 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 RGL2O15211 777 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 HMOX1P09601 288 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-203ENST00000447360 TEFQ10587 303 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 OLFM4Q6UX06 510 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 SAPCD2Q86UD0 394 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 FMNL2Q96PY5 1086 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 TSKSQ9UJT2 592 aa9.61□□□□□ -0.87
LRRC28-203ENST00000447360 AOC2O75106 756 aa9.6□□□□□ -0.87
LRRC28-203ENST00000447360 EPS15P42566 896 aa9.6□□□□□ -0.87
LRRC28-203ENST00000447360 SCNN1DP51172 638 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms