RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ADCY9O60503 1353 aa22.91■■□□□ 1.26
SDCBP-204ENST00000447182 CASTP20810 708 aaKnown RBP22.9■■□□□ 1.26
SDCBP-204ENST00000447182 USHBP1Q8N6Y0 703 aa22.9■■□□□ 1.26
SDCBP-204ENST00000447182 ZSCAN31Q96LW9 406 aaPredicted RBP22.9■■□□□ 1.26
SDCBP-204ENST00000447182 DIAPH3Q9NSV4 1193 aa22.9■■□□□ 1.26
SDCBP-204ENST00000447182 IP6K1Q92551 441 aa22.9■■□□□ 1.26
SDCBP-204ENST00000447182 SH2B1Q9NRF2 756 aaPredicted RBP22.9■■□□□ 1.26
SDCBP-204ENST00000447182 LMO7Q8WWI1 1683 aa22.89■■□□□ 1.25
SDCBP-204ENST00000447182 VSIG10Q8N0Z9 540 aa22.89■■□□□ 1.25
SDCBP-204ENST00000447182 CLASRPQ8N2M8 674 aaKnown RBP22.89■■□□□ 1.25
SDCBP-204ENST00000447182 ZSWIM6Q9HCJ5 1215 aa22.89■■□□□ 1.25
SDCBP-204ENST00000447182 LGR6Q9HBX8 967 aa22.88■■□□□ 1.25
SDCBP-204ENST00000447182 CEBPAP49715 358 aaPredicted RBP22.88■■□□□ 1.25
SDCBP-204ENST00000447182 ECHDC1Q9NTX5 307 aa22.88■■□□□ 1.25
SDCBP-204ENST00000447182 ERC1Q8IUD2 1116 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 USP25Q9UHP3 1055 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 CHD2O14647 1828 aaKnown RBP22.87■■□□□ 1.25
SDCBP-204ENST00000447182 ALDH1L1O75891 902 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 LARGE1O95461 756 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 RBM10P98175 930 aaKnown RBP22.87■■□□□ 1.25
SDCBP-204ENST00000447182 OS9Q13438 667 aaPredicted RBP22.87■■□□□ 1.25
SDCBP-204ENST00000447182 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 MTERF4Q7Z6M4 381 aaKnown RBP22.87■■□□□ 1.25
SDCBP-204ENST00000447182 GPATCH3Q96I76 525 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 FUCA2Q9BTY2 467 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 PDRG1Q9NUG6 133 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 MTMR6Q9Y217 621 aa22.87■■□□□ 1.25
SDCBP-204ENST00000447182 ADGRL3Q9HAR2 1447 aa22.86■■□□□ 1.25
SDCBP-204ENST00000447182 GJB2P29033 226 aa22.86■■□□□ 1.25
SDCBP-204ENST00000447182 PTH1RQ03431 593 aa22.86■■□□□ 1.25
SDCBP-204ENST00000447182 PIBF1Q8WXW3 757 aa22.86■■□□□ 1.25
SDCBP-204ENST00000447182 HDAC5Q9UQL6 1122 aa22.86■■□□□ 1.25
SDCBP-204ENST00000447182 NFAT5O94916 1531 aa22.86■■□□□ 1.25
SDCBP-204ENST00000447182 ADCY5O95622 1261 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 PDIA4P13667 645 aaKnown RBP22.85■■□□□ 1.25
SDCBP-204ENST00000447182 HCLS1P14317 486 aaPredicted RBP22.85■■□□□ 1.25
SDCBP-204ENST00000447182 NBPF6Q5VWK0 638 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 NBPF4Q96M43 638 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 LARP6Q9BRS8 491 aaKnown RBP22.85■■□□□ 1.25
SDCBP-204ENST00000447182 CYP46A1Q9Y6A2 500 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 FIBPO43427 364 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 NECTIN1Q15223 517 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 CCDC83Q8IWF9 413 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 THEMISQ8N1K5 641 aaPredicted RBP22.85■■□□□ 1.25
SDCBP-204ENST00000447182 EVI5LQ96CN4 794 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 JAKMIP1Q96N16 626 aaKnown RBP22.85■■□□□ 1.25
SDCBP-204ENST00000447182 FAM13BQ9NYF5 915 aa22.85■■□□□ 1.25
SDCBP-204ENST00000447182 DBF4Q9UBU7 674 aaPredicted RBP22.85■■□□□ 1.25
SDCBP-204ENST00000447182 CPA1P15085 419 aa22.84■■□□□ 1.25
SDCBP-204ENST00000447182 ADCK5Q3MIX3 580 aa22.84■■□□□ 1.25
SDCBP-204ENST00000447182 AKAP4Q5JQC9 854 aa22.84■■□□□ 1.25
SDCBP-204ENST00000447182 KCNQ3O43525 872 aa22.84■■□□□ 1.25
SDCBP-204ENST00000447182 KDM4AO75164 1064 aa22.84■■□□□ 1.25
SDCBP-204ENST00000447182 PRPF40BQ6NWY9 871 aaKnown RBP22.84■■□□□ 1.25
SDCBP-204ENST00000447182 PHRF1Q9P1Y6 1649 aaKnown RBP22.83■■□□□ 1.25
SDCBP-204ENST00000447182 BTBD11A6QL63 1104 aa22.83■■□□□ 1.25
SDCBP-204ENST00000447182 KCNA6P17658 529 aa22.83■■□□□ 1.25
SDCBP-204ENST00000447182 TEFQ10587 303 aa22.83■■□□□ 1.25
SDCBP-204ENST00000447182 CCDC171Q6TFL3 1326 aa22.83■■□□□ 1.25
SDCBP-204ENST00000447182 SNRKQ9NRH2 765 aa22.82■■□□□ 1.24
SDCBP-204ENST00000447182 IFIT2P09913 472 aaKnown RBP22.82■■□□□ 1.24
SDCBP-204ENST00000447182 DNM1Q05193 864 aaKnown RBP22.82■■□□□ 1.24
SDCBP-204ENST00000447182 OVOS2A0A0G2JMS6 1433 aa22.82■■□□□ 1.24
SDCBP-204ENST00000447182 HIP1O00291 1037 aa22.81■■□□□ 1.24
SDCBP-204ENST00000447182 ZKSCAN1P17029 563 aaPredicted RBP22.81■■□□□ 1.24
SDCBP-204ENST00000447182 ST3GAL1Q11201 340 aa22.81■■□□□ 1.24
SDCBP-204ENST00000447182 NCAPD2Q15021 1401 aa22.81■■□□□ 1.24
SDCBP-204ENST00000447182 ANXA1P04083 346 aa22.81■■□□□ 1.24
SDCBP-204ENST00000447182 NOLC1Q14978 699 aaKnown RBP eCLIP22.81■■□□□ 1.24
SDCBP-204ENST00000447182 KSR2Q6VAB6 950 aa22.81■■□□□ 1.24
SDCBP-204ENST00000447182 PRIMPOLQ96LW4 560 aa22.81■■□□□ 1.24
SDCBP-204ENST00000447182 ZMYND15Q9H091 742 aa22.81■■□□□ 1.24
SDCBP-204ENST00000447182 C9orf78Q9NZ63 289 aaPredicted RBP22.81■■□□□ 1.24
SDCBP-204ENST00000447182 HEG1Q9ULI3 1381 aa22.81■■□□□ 1.24
SDCBP-204ENST00000447182 ME3Q16798 604 aa22.8■■□□□ 1.24
SDCBP-204ENST00000447182 MYRIPQ8NFW9 859 aa22.8■■□□□ 1.24
SDCBP-204ENST00000447182 MAP3K2Q9Y2U5 619 aa22.8■■□□□ 1.24
SDCBP-204ENST00000447182 MAP4K1Q92918 833 aa22.79■■□□□ 1.24
SDCBP-204ENST00000447182 SPTLC3Q9NUV7 552 aa22.79■■□□□ 1.24
SDCBP-204ENST00000447182 PHF8Q9UPP1 1060 aa22.79■■□□□ 1.24
SDCBP-204ENST00000447182 PLEKHO1Q53GL0 409 aaPredicted RBP22.79■■□□□ 1.24
SDCBP-204ENST00000447182 UTYO14607 1347 aa22.78■■□□□ 1.24
SDCBP-204ENST00000447182 AMOTQ4VCS5 1084 aa22.78■■□□□ 1.24
SDCBP-204ENST00000447182 CREB3L3Q68CJ9 461 aa22.78■■□□□ 1.24
SDCBP-204ENST00000447182 ZNF530Q6P9A1 599 aaPredicted RBP22.78■■□□□ 1.24
SDCBP-204ENST00000447182 GIMAP6Q6P9H5 292 aa22.78■■□□□ 1.24
SDCBP-204ENST00000447182 C14orf37Q86TY3 774 aa22.78■■□□□ 1.24
SDCBP-204ENST00000447182 RBM8AQ9Y5S9 174 aaKnown RBP22.78■■□□□ 1.24
SDCBP-204ENST00000447182 RGPD2P0DJD1 1756 aa22.78■■□□□ 1.24
SDCBP-204ENST00000447182 PA2G4Q9UQ80 394 aaKnown RBP22.78■■□□□ 1.24
SDCBP-204ENST00000447182 GIGYF1O75420 1035 aaPredicted RBP22.77■■□□□ 1.24
SDCBP-204ENST00000447182 PSMA5P28066 241 aa22.77■■□□□ 1.24
SDCBP-204ENST00000447182 HMGN5P82970 282 aaKnown RBP22.77■■□□□ 1.24
SDCBP-204ENST00000447182 AACSQ86V21 672 aa22.77■■□□□ 1.24
SDCBP-204ENST00000447182 ZNF830Q96NB3 372 aaPredicted RBP22.77■■□□□ 1.24
SDCBP-204ENST00000447182 TTC12Q9H892 705 aaPredicted RBP22.77■■□□□ 1.24
SDCBP-204ENST00000447182 ELP1O95163 1332 aa22.77■■□□□ 1.23
SDCBP-204ENST00000447182 RNMTO43148 476 aaKnown RBP22.76■■□□□ 1.23
SDCBP-204ENST00000447182 KCNH5Q8NCM2 988 aa22.76■■□□□ 1.23
SDCBP-204ENST00000447182 ALDH8A1Q9H2A2 487 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms