RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 POU5F1Q01860 360 aaKnown RBP10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 CCDC191Q8NCU4 936 aa10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 GBP4Q96PP9 640 aa10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 IRX2Q9BZI1 471 aaPredicted RBP10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 NACA2Q9H009 215 aa10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 SLKQ9H2G2 1235 aaPredicted RBP10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 SPATA7Q9P0W8 599 aa10.16□□□□□ -0.78
MCF2L2-203ENST00000447025 SASH1O94885 1247 aa10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 TGFB3P10600 412 aa10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 AKNAD1Q5T1N1 836 aa10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 C11orf96Q7Z7L8 435 aa10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 C1orf131Q8NDD1 294 aaKnown RBP10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 TBC1D5Q92609 795 aa10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 KIF1BPQ96EK5 621 aa10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 BAG1Q99933 345 aaPredicted RBP10.15□□□□□ -0.78
MCF2L2-203ENST00000447025 KRT38O76015 456 aa10.15□□□□□ -0.79
MCF2L2-203ENST00000447025 MECOMQ03112 1051 aa10.15□□□□□ -0.79
MCF2L2-203ENST00000447025 PREPLQ4J6C6 727 aaPredicted RBP10.15□□□□□ -0.79
MCF2L2-203ENST00000447025 GIMAP7Q8NHV1 300 aa10.15□□□□□ -0.79
MCF2L2-203ENST00000447025 A1CFQ9NQ94 594 aaKnown RBP10.15□□□□□ -0.79
MCF2L2-203ENST00000447025 TBC1D7Q9P0N9 293 aa10.15□□□□□ -0.79
MCF2L2-203ENST00000447025 DHX29Q7Z478 1369 aaKnown RBP10.15□□□□□ -0.79
MCF2L2-203ENST00000447025 GCFC2P16383 781 aaKnown RBP10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 SFSWAPQ12872 951 aaKnown RBP10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 CRYMQ14894 314 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 C8orf34Q49A92 452 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 ARMC3Q5W041 872 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 IQUBQ8NA54 791 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 UHMK1Q8TAS1 419 aaKnown RBP10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 CHMP5Q9NZZ3 219 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 KAT6BQ8WYB5 2073 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 FAM177BA6PVY3 158 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 DEUP1Q05D60 604 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 FKBP5Q13451 457 aaPredicted RBP10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 DBN1Q16643 649 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 VPS37AQ8NEZ2 397 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 PICK1Q9NRD5 415 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 USP25Q9UHP3 1055 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 N6AMT1Q9Y5N5 214 aa10.14□□□□□ -0.79
MCF2L2-203ENST00000447025 GAPVD1Q14C86 1478 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 MYL1P05976 194 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 LMNB1P20700 586 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 NCBP1Q09161 790 aaKnown RBP10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 EXOC6Q8TAG9 804 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 PIBF1Q8WXW3 757 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 VTI1AQ96AJ9 217 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 PRXQ9BXM0 1461 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 BARX2Q9UMQ3 279 aaPredicted RBP10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 NUDCQ9Y266 331 aa10.13□□□□□ -0.79
MCF2L2-203ENST00000447025 PYGLP06737 847 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 ELF1P32519 619 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 CCNHP51946 323 aaPredicted RBP10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 FXNQ16595 210 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 TEX35Q5T0J7 233 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 FILIP1Q7Z7B0 1213 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 MYO1HQ8N1T3 1032 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 HDAC7Q8WUI4 952 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 CARMIL1Q5VZK9 1371 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 MMEP08473 750 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 CHGAP10645 457 aaKnown RBP10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 PYGBP11216 843 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 USP8P40818 1118 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 SAPCD2Q86UD0 394 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 NBPF15Q8N660 670 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 FBXO18Q8NFZ0 1043 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 ENOX1Q8TC92 643 aaKnown RBP10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 FAM81BQ96LP2 452 aa10.12□□□□□ -0.79
MCF2L2-203ENST00000447025 CCDC194A0A1B0GVG4 234 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 ZBED6P86452 979 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 KCNN1Q92952 543 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 MRFAP1L1Q96HT8 127 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 RBM17Q96I25 401 aaKnown RBP10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 LRRC27Q9C0I9 530 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 SPTLC3Q9NUV7 552 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 H7C1W4 665 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 MYO1BO43795 1136 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 HARSP12081 509 aaKnown RBP10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 CYP11B2P19099 503 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 C4orf46Q504U0 113 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 TRIML1Q8N9V2 468 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 GOLGA5Q8TBA6 731 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 TRIM11Q96F44 468 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 SENP7Q9BQF6 1050 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 HECW2Q9P2P5 1572 aa10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
MCF2L2-203ENST00000447025 ABCA5Q8WWZ7 1642 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 CGNL1Q0VF96 1302 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 DUSP27Q5VZP5 1158 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 SPATA21Q7Z572 469 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 DIS3Q9Y2L1 958 aaKnown RBP10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 ATP8A1Q9Y2Q0 1164 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 TRIM64CA6NLI5 447 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 HOXD10P28358 340 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms