RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 ZBED9Q6R2W3 1325 aa23.48■■□□□ 1.35
PHTF1-207ENST00000446739 VAMP4O75379 141 aa23.47■■□□□ 1.35
PHTF1-207ENST00000446739 MMP10P09238 476 aa23.47■■□□□ 1.35
PHTF1-207ENST00000446739 KIF6Q6ZMV9 814 aa23.47■■□□□ 1.35
PHTF1-207ENST00000446739 ZNF652Q9Y2D9 606 aa23.47■■□□□ 1.35
PHTF1-207ENST00000446739 ERVV-1B6SEH8 477 aa23.46■■□□□ 1.35
PHTF1-207ENST00000446739 CLEC4GQ6UXB4 293 aa23.46■■□□□ 1.35
PHTF1-207ENST00000446739 MAP3K15Q6ZN16 1313 aa23.46■■□□□ 1.35
PHTF1-207ENST00000446739 TTLL7Q6ZT98 887 aa23.46■■□□□ 1.35
PHTF1-207ENST00000446739 AFDNP55196 1824 aaKnown RBP23.45■■□□□ 1.34
PHTF1-207ENST00000446739 STK31Q9BXU1 1019 aa23.45■■□□□ 1.34
PHTF1-207ENST00000446739 TM4SF1P30408 202 aa23.44■■□□□ 1.34
PHTF1-207ENST00000446739 COPS6Q7L5N1 327 aa23.44■■□□□ 1.34
PHTF1-207ENST00000446739 XAGE3Q8WTP9 111 aa23.44■■□□□ 1.34
PHTF1-207ENST00000446739 PARP3Q9Y6F1 533 aa23.44■■□□□ 1.34
PHTF1-207ENST00000446739 NFIXQ14938 502 aa23.43■■□□□ 1.34
PHTF1-207ENST00000446739 ANKRD36CQ5JPF3 1778 aa23.42■■□□□ 1.34
PHTF1-207ENST00000446739 AIMP1Q12904 312 aaKnown RBP23.42■■□□□ 1.34
PHTF1-207ENST00000446739 TBC1D9BQ66K14 1250 aa23.42■■□□□ 1.34
PHTF1-207ENST00000446739 NRXN2Q9P2S2 1712 aa23.42■■□□□ 1.34
PHTF1-207ENST00000446739 HLFQ16534 295 aa23.41■■□□□ 1.34
PHTF1-207ENST00000446739 ZBTB3Q9H5J0 574 aa23.41■■□□□ 1.34
PHTF1-207ENST00000446739 KIF13BQ9NQT8 1826 aa23.4■■□□□ 1.34
PHTF1-207ENST00000446739 ARFGEF2Q9Y6D5 1785 aa23.4■■□□□ 1.34
PHTF1-207ENST00000446739 POLRMTO00411 1230 aaKnown RBP23.4■■□□□ 1.34
PHTF1-207ENST00000446739 DDR1Q08345 913 aa23.4■■□□□ 1.34
PHTF1-207ENST00000446739 GIGYF2Q6Y7W6 1299 aaKnown RBP23.4■■□□□ 1.34
PHTF1-207ENST00000446739 TCERG1O14776 1098 aaKnown RBP23.39■■□□□ 1.33
PHTF1-207ENST00000446739 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.33
PHTF1-207ENST00000446739 SETDB2Q96T68 719 aa23.39■■□□□ 1.33
PHTF1-207ENST00000446739 PHAXQ9H814 394 aaKnown RBP23.39■■□□□ 1.33
PHTF1-207ENST00000446739 ATP10DQ9P241 1426 aa23.39■■□□□ 1.33
PHTF1-207ENST00000446739 CARMIL3Q8ND23 1372 aa23.39■■□□□ 1.33
PHTF1-207ENST00000446739 SLC4A2P04920 1241 aa23.38■■□□□ 1.33
PHTF1-207ENST00000446739 CT47B1P0C2W7 299 aaPredicted RBP23.38■■□□□ 1.33
PHTF1-207ENST00000446739 PLBD2Q8NHP8 589 aa23.38■■□□□ 1.33
PHTF1-207ENST00000446739 ZNF428Q96B54 188 aa23.38■■□□□ 1.33
PHTF1-207ENST00000446739 ANKRD13DQ6ZTN6 518 aa23.37■■□□□ 1.33
PHTF1-207ENST00000446739 DDX58O95786 925 aaKnown RBP23.36■■□□□ 1.33
PHTF1-207ENST00000446739 SERPINB2P05120 415 aa23.36■■□□□ 1.33
PHTF1-207ENST00000446739 HSP90AB3PQ58FF7 597 aa23.36■■□□□ 1.33
PHTF1-207ENST00000446739 FHDC1Q9C0D6 1143 aaPredicted RBP23.36■■□□□ 1.33
PHTF1-207ENST00000446739 NIP7Q9Y221 180 aaKnown RBP eCLIP23.36■■□□□ 1.33
PHTF1-207ENST00000446739 CD2APQ9Y5K6 639 aa23.35■■□□□ 1.33
PHTF1-207ENST00000446739 C10orf71Q711Q0 1435 aa23.34■■□□□ 1.33
PHTF1-207ENST00000446739 KLHL34Q8N239 644 aa23.34■■□□□ 1.33
PHTF1-207ENST00000446739 FLIIQ13045 1269 aa23.33■■□□□ 1.33
PHTF1-207ENST00000446739 RIC3Q7Z5B4 369 aa23.33■■□□□ 1.33
PHTF1-207ENST00000446739 ZNF34Q8IZ26 560 aa23.33■■□□□ 1.33
PHTF1-207ENST00000446739 SYT17Q9BSW7 474 aa23.33■■□□□ 1.33
PHTF1-207ENST00000446739 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
PHTF1-207ENST00000446739 G2E3Q7L622 706 aa23.32■■□□□ 1.32
PHTF1-207ENST00000446739 GPTP24298 496 aa23.31■■□□□ 1.32
PHTF1-207ENST00000446739 ALDH1L2Q3SY69 923 aa23.31■■□□□ 1.32
PHTF1-207ENST00000446739 PARP10Q53GL7 1025 aa23.31■■□□□ 1.32
PHTF1-207ENST00000446739 KSR2Q6VAB6 950 aa23.3■■□□□ 1.32
PHTF1-207ENST00000446739 NBPF5PQ86XG9 351 aaPredicted RBP23.3■■□□□ 1.32
PHTF1-207ENST00000446739 CNBD1Q8NA66 436 aa23.3■■□□□ 1.32
PHTF1-207ENST00000446739 ANKRD31Q8N7Z5 1873 aa23.3■■□□□ 1.32
PHTF1-207ENST00000446739 UBN2Q6ZU65 1347 aa23.3■■□□□ 1.32
PHTF1-207ENST00000446739 IBTKQ9P2D0 1353 aaPredicted RBP23.29■■□□□ 1.32
PHTF1-207ENST00000446739 NPHP1O15259 732 aa23.29■■□□□ 1.32
PHTF1-207ENST00000446739 FKBP5Q13451 457 aaPredicted RBP23.29■■□□□ 1.32
PHTF1-207ENST00000446739 PRR5LQ6MZQ0 368 aa23.29■■□□□ 1.32
PHTF1-207ENST00000446739 TPTE2Q6XPS3 522 aa23.29■■□□□ 1.32
PHTF1-207ENST00000446739 SSH1Q8WYL5 1049 aa23.29■■□□□ 1.32
PHTF1-207ENST00000446739 NYXQ9GZU5 481 aa23.29■■□□□ 1.32
PHTF1-207ENST00000446739 KIAA1551Q9HCM1 1747 aa23.29■■□□□ 1.32
PHTF1-207ENST00000446739 N4BP2Q86UW6 1770 aaPredicted RBP23.28■■□□□ 1.32
PHTF1-207ENST00000446739 PI4KAP2A4QPH2 592 aa23.28■■□□□ 1.32
PHTF1-207ENST00000446739 MRPL50Q8N5N7 158 aaKnown RBP23.28■■□□□ 1.32
PHTF1-207ENST00000446739 PI4KAP1Q8N8J0 262 aa23.28■■□□□ 1.32
PHTF1-207ENST00000446739 ADCY9O60503 1353 aa23.27■■□□□ 1.32
PHTF1-207ENST00000446739 ST5P78524 1137 aa23.27■■□□□ 1.32
PHTF1-207ENST00000446739 PPP1R42Q7Z4L9 355 aa23.27■■□□□ 1.32
PHTF1-207ENST00000446739 ISCA1Q9BUE6 129 aa23.27■■□□□ 1.32
PHTF1-207ENST00000446739 METTL22Q9BUU2 404 aaPredicted RBP23.27■■□□□ 1.32
PHTF1-207ENST00000446739 MAP3K2Q9Y2U5 619 aa23.27■■□□□ 1.32
PHTF1-207ENST00000446739 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
PHTF1-207ENST00000446739 TGFB2P61812 414 aa23.26■■□□□ 1.31
PHTF1-207ENST00000446739 TRIM28Q13263 835 aaKnown RBP23.26■■□□□ 1.31
PHTF1-207ENST00000446739 SUSD4Q5VX71 490 aa23.26■■□□□ 1.31
PHTF1-207ENST00000446739 NLRP10Q86W26 655 aa23.26■■□□□ 1.31
PHTF1-207ENST00000446739 SMC4Q9NTJ3 1288 aa23.26■■□□□ 1.31
PHTF1-207ENST00000446739 GTF2E1P29083 439 aaPredicted RBP23.25■■□□□ 1.31
PHTF1-207ENST00000446739 NLGN2Q8NFZ4 835 aa23.25■■□□□ 1.31
PHTF1-207ENST00000446739 RNF123Q5XPI4 1314 aa23.25■■□□□ 1.31
PHTF1-207ENST00000446739 DLEC1Q9Y238 1755 aa23.24■■□□□ 1.31
PHTF1-207ENST00000446739 BRCA1P38398 1863 aaKnown RBP23.24■■□□□ 1.31
PHTF1-207ENST00000446739 NTSR2O95665 410 aa23.24■■□□□ 1.31
PHTF1-207ENST00000446739 RARSP54136 660 aaKnown RBP23.24■■□□□ 1.31
PHTF1-207ENST00000446739 NEXNQ0ZGT2 675 aa23.24■■□□□ 1.31
PHTF1-207ENST00000446739 DNAAF4Q8WXU2 420 aa23.24■■□□□ 1.31
PHTF1-207ENST00000446739 MYD88Q99836 296 aa23.24■■□□□ 1.31
PHTF1-207ENST00000446739 UTP14AQ9BVJ6 771 aaKnown RBP23.24■■□□□ 1.31
PHTF1-207ENST00000446739 BRIP1Q9BX63 1249 aa23.24■■□□□ 1.31
PHTF1-207ENST00000446739 BCL2L13Q9BXK5 485 aa23.24■■□□□ 1.31
PHTF1-207ENST00000446739 PXDNLA1KZ92 1463 aa23.24■■□□□ 1.31
PHTF1-207ENST00000446739 ATP5J2-PTCD1G3V325 749 aa23.23■■□□□ 1.31
PHTF1-207ENST00000446739 PTPRCP08575 1304 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms