RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 TSPYL6Q8N831 410 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 C8orf58Q8NAV2 365 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 PANK1Q8TE04 598 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 SMC4Q9NTJ3 1288 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
LINC00578-204ENST00000446548 PTGDRQ13258 359 aa11.23□□□□□ -0.61
LINC00578-204ENST00000446548 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
LINC00578-204ENST00000446548 FRAT1Q92837 279 aaPredicted RBP11.23□□□□□ -0.61
LINC00578-204ENST00000446548 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
LINC00578-204ENST00000446548 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
LINC00578-204ENST00000446548 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
LINC00578-204ENST00000446548 NBPF26B4DH59 902 aa11.22□□□□□ -0.61
LINC00578-204ENST00000446548 CANXP27824 592 aaKnown RBP11.22□□□□□ -0.61
LINC00578-204ENST00000446548 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
LINC00578-204ENST00000446548 CEMIPQ8WUJ3 1361 aa11.22□□□□□ -0.61
LINC00578-204ENST00000446548 ZNF428Q96B54 188 aa11.22□□□□□ -0.61
LINC00578-204ENST00000446548 NPDC1Q9NQX5 325 aaPredicted RBP11.22□□□□□ -0.61
LINC00578-204ENST00000446548 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.61
LINC00578-204ENST00000446548 COL16A1Q07092 1604 aaPredicted RBP11.21□□□□□ -0.61
LINC00578-204ENST00000446548 MEGF6O75095 1541 aa11.21□□□□□ -0.61
LINC00578-204ENST00000446548 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.61
LINC00578-204ENST00000446548 KDM2BQ8NHM5 1336 aa11.21□□□□□ -0.61
LINC00578-204ENST00000446548 ZKSCAN2Q63HK3 967 aa11.21□□□□□ -0.61
LINC00578-204ENST00000446548 IL17REQ8NFR9 667 aa11.21□□□□□ -0.61
LINC00578-204ENST00000446548 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
LINC00578-204ENST00000446548 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.61
LINC00578-204ENST00000446548 CACNA1FO60840 1977 aa11.21□□□□□ -0.62
LINC00578-204ENST00000446548 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
LINC00578-204ENST00000446548 TRIM27P14373 513 aa11.2□□□□□ -0.62
LINC00578-204ENST00000446548 CHRNA2Q15822 529 aa11.2□□□□□ -0.62
LINC00578-204ENST00000446548 KRT24Q2M2I5 525 aa11.2□□□□□ -0.62
LINC00578-204ENST00000446548 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
LINC00578-204ENST00000446548 PADI6Q6TGC4 694 aa11.2□□□□□ -0.62
LINC00578-204ENST00000446548 COG6Q9Y2V7 657 aa11.2□□□□□ -0.62
LINC00578-204ENST00000446548 N4BP2Q86UW6 1770 aaPredicted RBP11.2□□□□□ -0.62
LINC00578-204ENST00000446548 PHLPP1O60346 1717 aa11.2□□□□□ -0.62
LINC00578-204ENST00000446548 COL5A2P05997 1499 aaPredicted RBP11.19□□□□□ -0.62
LINC00578-204ENST00000446548 PLEKHG2Q9H7P9 1386 aa11.19□□□□□ -0.62
LINC00578-204ENST00000446548 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
LINC00578-204ENST00000446548 ATF7IPQ6VMQ6 1270 aa11.19□□□□□ -0.62
LINC00578-204ENST00000446548 WNT2BQ93097 391 aa11.19□□□□□ -0.62
LINC00578-204ENST00000446548 SEPT9Q9UHD8 586 aaPredicted RBP11.19□□□□□ -0.62
LINC00578-204ENST00000446548 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
LINC00578-204ENST00000446548 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
LINC00578-204ENST00000446548 ELL2O00472 640 aaPredicted RBP11.18□□□□□ -0.62
LINC00578-204ENST00000446548 PLEKHO1Q53GL0 409 aaPredicted RBP11.18□□□□□ -0.62
LINC00578-204ENST00000446548 AKAP4Q5JQC9 854 aa11.18□□□□□ -0.62
LINC00578-204ENST00000446548 ZNF530Q6P9A1 599 aaPredicted RBP11.18□□□□□ -0.62
LINC00578-204ENST00000446548 DZIP1LQ8IYY4 767 aaKnown RBP11.18□□□□□ -0.62
LINC00578-204ENST00000446548 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
LINC00578-204ENST00000446548 MIS18AQ9NYP9 233 aa11.18□□□□□ -0.62
LINC00578-204ENST00000446548 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
LINC00578-204ENST00000446548 PNMA3Q9UL41 463 aa11.18□□□□□ -0.62
LINC00578-204ENST00000446548 WNK3Q9BYP7 1800 aa11.18□□□□□ -0.62
LINC00578-204ENST00000446548 MS4A1P11836 297 aa11.17□□□□□ -0.62
LINC00578-204ENST00000446548 HIC1Q14526 733 aa11.17□□□□□ -0.62
LINC00578-204ENST00000446548 MVPQ14764 893 aaKnown RBP11.17□□□□□ -0.62
LINC00578-204ENST00000446548 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
LINC00578-204ENST00000446548 GPIHBP1Q8IV16 184 aa11.17□□□□□ -0.62
LINC00578-204ENST00000446548 ANKK1Q8NFD2 765 aa11.17□□□□□ -0.62
LINC00578-204ENST00000446548 TATDN2Q93075 761 aa11.17□□□□□ -0.62
LINC00578-204ENST00000446548 BABAM1Q9NWV8 329 aa11.17□□□□□ -0.62
LINC00578-204ENST00000446548 RGS12O14924 1447 aa11.17□□□□□ -0.62
LINC00578-204ENST00000446548 TCERG1O14776 1098 aaKnown RBP11.16□□□□□ -0.62
LINC00578-204ENST00000446548 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
LINC00578-204ENST00000446548 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
LINC00578-204ENST00000446548 LGR6Q9HBX8 967 aa11.16□□□□□ -0.62
LINC00578-204ENST00000446548 NLRP2Q9NX02 1062 aa11.16□□□□□ -0.62
LINC00578-204ENST00000446548 HCSTQ9UBK5 93 aa11.16□□□□□ -0.62
LINC00578-204ENST00000446548 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
LINC00578-204ENST00000446548 MRC1P22897 1456 aa11.16□□□□□ -0.62
LINC00578-204ENST00000446548 PLCH1Q4KWH8 1693 aa11.16□□□□□ -0.62
LINC00578-204ENST00000446548 KDM6AO15550 1401 aaPredicted RBP11.16□□□□□ -0.62
LINC00578-204ENST00000446548 NRAPQ86VF7 1730 aa11.15□□□□□ -0.62
LINC00578-204ENST00000446548 ABCC4O15439 1325 aa11.15□□□□□ -0.62
LINC00578-204ENST00000446548 C5P01031 1676 aa11.15□□□□□ -0.62
LINC00578-204ENST00000446548 IPO8O15397 1037 aaKnown RBP11.15□□□□□ -0.62
LINC00578-204ENST00000446548 RNMTO43148 476 aaKnown RBP11.15□□□□□ -0.62
LINC00578-204ENST00000446548 AAMPQ13685 434 aa11.15□□□□□ -0.62
LINC00578-204ENST00000446548 TAF7Q15545 349 aaPredicted RBP11.15□□□□□ -0.62
LINC00578-204ENST00000446548 NUDT18Q6ZVK8 323 aa11.15□□□□□ -0.62
LINC00578-204ENST00000446548 CENPQQ7L2Z9 268 aaPredicted RBP11.15□□□□□ -0.62
LINC00578-204ENST00000446548 FTSJ3Q8IY81 847 aaKnown RBP11.15□□□□□ -0.62
LINC00578-204ENST00000446548 TMEM57Q8N5G2 664 aa11.15□□□□□ -0.62
LINC00578-204ENST00000446548 ARHGAP45Q92619 1136 aa11.15□□□□□ -0.62
LINC00578-204ENST00000446548 PRDM11Q9NQV5 511 aa11.15□□□□□ -0.62
LINC00578-204ENST00000446548 WDR17Q8IZU2 1322 aa11.14□□□□□ -0.63
LINC00578-204ENST00000446548 TOGARAM1Q9Y4F4 1720 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 GLI3P10071 1580 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 SMAPO00193 183 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 CSB-PGBD3P0DP91 1061 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 TATP17735 454 aaPredicted RBP11.13□□□□□ -0.63
LINC00578-204ENST00000446548 MPRIPQ6WCQ1 1025 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 THSD4Q6ZMP0 1018 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 RAPGEF4Q8WZA2 1011 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 PAPPAQ13219 1627 aa11.13□□□□□ -0.63
LINC00578-204ENST00000446548 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
LINC00578-204ENST00000446548 GNPATO15228 680 aa11.12□□□□□ -0.63
LINC00578-204ENST00000446548 IGHDP01880 384 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms