RNA–Protein interactions for RNA: ENST00000445605.5

FAM49A-203, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 4

Gene FAM49A, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-203ENST00000445605 MKRN1Q9UHC7 482 aaKnown RBP23.12■■□□□ 1.29
FAM49A-203ENST00000445605 SLX4Q8IY92 1834 aa23.12■■□□□ 1.29
FAM49A-203ENST00000445605 PER1O15534 1290 aaPredicted RBP23.11■■□□□ 1.29
FAM49A-203ENST00000445605 CAMTA2O94983 1202 aa23.11■■□□□ 1.29
FAM49A-203ENST00000445605 SRGNP10124 158 aa23.11■■□□□ 1.29
FAM49A-203ENST00000445605 DZIP3Q86Y13 1208 aaKnown RBP23.11■■□□□ 1.29
FAM49A-203ENST00000445605 SIPA1L3O60292 1781 aaPredicted RBP23.1■■□□□ 1.29
FAM49A-203ENST00000445605 BTBD11A6QL63 1104 aa23.1■■□□□ 1.29
FAM49A-203ENST00000445605 IQCA1LA6NCM1 817 aa23.09■■□□□ 1.29
FAM49A-203ENST00000445605 POTEIP0CG38 1075 aa23.08■■□□□ 1.29
FAM49A-203ENST00000445605 POTEJP0CG39 1038 aa23.08■■□□□ 1.29
FAM49A-203ENST00000445605 NBPF5PQ86XG9 351 aaPredicted RBP23.08■■□□□ 1.29
FAM49A-203ENST00000445605 KCNQ3O43525 872 aa23.06■■□□□ 1.28
FAM49A-203ENST00000445605 ZNF652Q9Y2D9 606 aa23.06■■□□□ 1.28
FAM49A-203ENST00000445605 ARFGEF2Q9Y6D5 1785 aa23.06■■□□□ 1.28
FAM49A-203ENST00000445605 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
FAM49A-203ENST00000445605 CCDC93Q567U6 631 aa23.05■■□□□ 1.28
FAM49A-203ENST00000445605 LDHDQ86WU2 507 aa23.05■■□□□ 1.28
FAM49A-203ENST00000445605 USP16Q9Y5T5 823 aa23.05■■□□□ 1.28
FAM49A-203ENST00000445605 COL3A1P02461 1466 aaPredicted RBP23.05■■□□□ 1.28
FAM49A-203ENST00000445605 BCORQ6W2J9 1755 aa23.04■■□□□ 1.28
FAM49A-203ENST00000445605 CEMIPQ8WUJ3 1361 aa23.04■■□□□ 1.28
FAM49A-203ENST00000445605 CLEC4GQ6UXB4 293 aa23.04■■□□□ 1.28
FAM49A-203ENST00000445605 SCN4AP35499 1836 aa23.03■■□□□ 1.28
FAM49A-203ENST00000445605 NPR1P16066 1061 aa23.03■■□□□ 1.28
FAM49A-203ENST00000445605 TAF1DQ9H5J8 278 aaPredicted RBP23.03■■□□□ 1.28
FAM49A-203ENST00000445605 PRKAR2BP31323 418 aa23.02■■□□□ 1.28
FAM49A-203ENST00000445605 EAPPQ56P03 285 aaPredicted RBP23.02■■□□□ 1.28
FAM49A-203ENST00000445605 TPTE2Q6XPS3 522 aa23.02■■□□□ 1.28
FAM49A-203ENST00000445605 L3MBTL3Q96JM7 780 aaPredicted RBP23.02■■□□□ 1.28
FAM49A-203ENST00000445605 PHACTR3Q96KR7 559 aa23.02■■□□□ 1.28
FAM49A-203ENST00000445605 SNRPA1P09661 255 aaKnown RBP23.01■■□□□ 1.27
FAM49A-203ENST00000445605 FKBP4Q02790 459 aaKnown RBP eCLIP23.01■■□□□ 1.27
FAM49A-203ENST00000445605 C7orf43Q8WVR3 580 aa23.01■■□□□ 1.27
FAM49A-203ENST00000445605 RTF1Q92541 710 aaKnown RBP23.01■■□□□ 1.27
FAM49A-203ENST00000445605 AIDAQ96BJ3 306 aa23.01■■□□□ 1.27
FAM49A-203ENST00000445605 CFAP53Q96M91 514 aa23.01■■□□□ 1.27
FAM49A-203ENST00000445605 CLEC11AQ9Y240 323 aa23.01■■□□□ 1.27
FAM49A-203ENST00000445605 CNTNAP1P78357 1384 aa23.01■■□□□ 1.27
FAM49A-203ENST00000445605 NPC1L1Q9UHC9 1359 aa23.01■■□□□ 1.27
FAM49A-203ENST00000445605 ZNF277Q9NRM2 450 aaPredicted RBP23■■□□□ 1.27
FAM49A-203ENST00000445605 PASKQ96RG2 1323 aa23■■□□□ 1.27
FAM49A-203ENST00000445605 PRAMEF22A3QJZ6 481 aa22.99■■□□□ 1.27
FAM49A-203ENST00000445605 TMEM88BA6NKF7 163 aa22.99■■□□□ 1.27
FAM49A-203ENST00000445605 FAM177BA6PVY3 158 aa22.99■■□□□ 1.27
FAM49A-203ENST00000445605 FOXN1O15353 648 aa22.99■■□□□ 1.27
FAM49A-203ENST00000445605 RTKN2Q8IZC4 609 aa22.99■■□□□ 1.27
FAM49A-203ENST00000445605 HACL1Q9UJ83 578 aa22.99■■□□□ 1.27
FAM49A-203ENST00000445605 NIP7Q9Y221 180 aaKnown RBP eCLIP22.99■■□□□ 1.27
FAM49A-203ENST00000445605 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
FAM49A-203ENST00000445605 NUDCQ9Y266 331 aa22.98■■□□□ 1.27
FAM49A-203ENST00000445605 GTF2E1P29083 439 aaPredicted RBP22.97■■□□□ 1.27
FAM49A-203ENST00000445605 ALDH1B1P30837 517 aa22.97■■□□□ 1.27
FAM49A-203ENST00000445605 KLRG2A4D1S0 409 aaPredicted RBP22.96■■□□□ 1.27
FAM49A-203ENST00000445605 EPHX2P34913 555 aa22.96■■□□□ 1.27
FAM49A-203ENST00000445605 VEGFBP49765 207 aa22.96■■□□□ 1.27
FAM49A-203ENST00000445605 MCM10Q7L590 875 aa22.96■■□□□ 1.27
FAM49A-203ENST00000445605 PRDM10Q9NQV6 1147 aa22.96■■□□□ 1.27
FAM49A-203ENST00000445605 ZNF541Q9H0D2 1346 aa22.96■■□□□ 1.27
FAM49A-203ENST00000445605 ITGBL1O95965 494 aaPredicted RBP22.95■■□□□ 1.26
FAM49A-203ENST00000445605 CTCFP49711 727 aaPredicted RBP22.95■■□□□ 1.26
FAM49A-203ENST00000445605 OLFM4Q6UX06 510 aa22.95■■□□□ 1.26
FAM49A-203ENST00000445605 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
FAM49A-203ENST00000445605 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
FAM49A-203ENST00000445605 PNMA8AQ86V59 439 aaPredicted RBP22.94■■□□□ 1.26
FAM49A-203ENST00000445605 SYNE4Q8N205 404 aa22.94■■□□□ 1.26
FAM49A-203ENST00000445605 RGL2O15211 777 aa22.93■■□□□ 1.26
FAM49A-203ENST00000445605 IARSP41252 1262 aaKnown RBP22.93■■□□□ 1.26
FAM49A-203ENST00000445605 RNF123Q5XPI4 1314 aa22.92■■□□□ 1.26
FAM49A-203ENST00000445605 NBPF26B4DH59 902 aa22.92■■□□□ 1.26
FAM49A-203ENST00000445605 NBPF10Q6P3W6 841 aaKnown RBP22.92■■□□□ 1.26
FAM49A-203ENST00000445605 NBPF15Q8N660 670 aa22.92■■□□□ 1.26
FAM49A-203ENST00000445605 JDP2Q8WYK2 163 aa22.92■■□□□ 1.26
FAM49A-203ENST00000445605 CNTROBQ8N137 903 aa22.91■■□□□ 1.26
FAM49A-203ENST00000445605 FZD9O00144 591 aa22.9■■□□□ 1.26
FAM49A-203ENST00000445605 DCTN1Q14203 1278 aa22.9■■□□□ 1.26
FAM49A-203ENST00000445605 HLFQ16534 295 aa22.9■■□□□ 1.26
FAM49A-203ENST00000445605 DEFB115Q30KQ5 88 aa22.9■■□□□ 1.26
FAM49A-203ENST00000445605 MAP1SQ66K74 1059 aaPredicted RBP22.9■■□□□ 1.26
FAM49A-203ENST00000445605 GPC2Q8N158 579 aa22.9■■□□□ 1.26
FAM49A-203ENST00000445605 HTATSF1O43719 755 aaKnown RBP22.89■■□□□ 1.25
FAM49A-203ENST00000445605 WBP1LQ9NX94 342 aa22.89■■□□□ 1.25
FAM49A-203ENST00000445605 LBX1P52954 281 aa22.88■■□□□ 1.25
FAM49A-203ENST00000445605 EIF6P56537 245 aaKnown RBP22.88■■□□□ 1.25
FAM49A-203ENST00000445605 TAF7Q15545 349 aaPredicted RBP22.88■■□□□ 1.25
FAM49A-203ENST00000445605 NGEFQ8N5V2 710 aa22.88■■□□□ 1.25
FAM49A-203ENST00000445605 NYXQ9GZU5 481 aa22.88■■□□□ 1.25
FAM49A-203ENST00000445605 ABT1Q9ULW3 272 aaKnown RBP22.88■■□□□ 1.25
FAM49A-203ENST00000445605 PSMD1Q99460 953 aa22.87■■□□□ 1.25
FAM49A-203ENST00000445605 GJA3Q9Y6H8 435 aa22.87■■□□□ 1.25
FAM49A-203ENST00000445605 ADAMTSL1Q8N6G6 1762 aa22.86■■□□□ 1.25
FAM49A-203ENST00000445605 RASSF10A6NK89 507 aa22.86■■□□□ 1.25
FAM49A-203ENST00000445605 LMOD1P29536 600 aaPredicted RBP22.86■■□□□ 1.25
FAM49A-203ENST00000445605 CC2D2BQ6DHV5 1058 aa22.86■■□□□ 1.25
FAM49A-203ENST00000445605 NUTM1Q86Y26 1132 aa22.85■■□□□ 1.25
FAM49A-203ENST00000445605 RPGRQ92834 1020 aaKnown RBP22.85■■□□□ 1.25
FAM49A-203ENST00000445605 MIS18AQ9NYP9 233 aa22.85■■□□□ 1.25
FAM49A-203ENST00000445605 MAP2K1Q02750 393 aaPredicted RBP22.84■■□□□ 1.25
FAM49A-203ENST00000445605 WDR33Q9C0J8 1336 aaKnown RBP22.83■■□□□ 1.25
FAM49A-203ENST00000445605 ERVV-1B6SEH8 477 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms