RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 LRRCC1Q9C099 1032 aa12.92□□□□□ -0.34
CALD1-211ENST00000445569 COL15A1P39059 1388 aa12.92□□□□□ -0.34
CALD1-211ENST00000445569 AOX1Q06278 1338 aa12.91□□□□□ -0.34
CALD1-211ENST00000445569 TUBGCP6Q96RT7 1819 aa12.91□□□□□ -0.34
CALD1-211ENST00000445569 GRM8O00222 908 aa12.91□□□□□ -0.34
CALD1-211ENST00000445569 EXOC5O00471 708 aa12.91□□□□□ -0.34
CALD1-211ENST00000445569 CDC45O75419 566 aa12.91□□□□□ -0.34
CALD1-211ENST00000445569 POLA2Q14181 598 aa12.91□□□□□ -0.34
CALD1-211ENST00000445569 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
CALD1-211ENST00000445569 XAGE3Q8WTP9 111 aa12.91□□□□□ -0.34
CALD1-211ENST00000445569 METTL22Q9BUU2 404 aaPredicted RBP12.91□□□□□ -0.34
CALD1-211ENST00000445569 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
CALD1-211ENST00000445569 A0A0G2JS52 829 aa12.9□□□□□ -0.34
CALD1-211ENST00000445569 MYL6BP14649 208 aa12.9□□□□□ -0.34
CALD1-211ENST00000445569 MYT1Q01538 1121 aa12.9□□□□□ -0.34
CALD1-211ENST00000445569 AIMP1Q12904 312 aaKnown RBP12.9□□□□□ -0.34
CALD1-211ENST00000445569 CASC1Q6TDU7 716 aa12.9□□□□□ -0.34
CALD1-211ENST00000445569 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
CALD1-211ENST00000445569 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
CALD1-211ENST00000445569 PLBD2Q8NHP8 589 aa12.9□□□□□ -0.34
CALD1-211ENST00000445569 TJP1Q07157 1748 aa12.9□□□□□ -0.34
CALD1-211ENST00000445569 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
CALD1-211ENST00000445569 COPS6Q7L5N1 327 aa12.89□□□□□ -0.35
CALD1-211ENST00000445569 LRP10Q7Z4F1 713 aa12.89□□□□□ -0.35
CALD1-211ENST00000445569 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
CALD1-211ENST00000445569 PLEKHM2Q8IWE5 1019 aa12.89□□□□□ -0.35
CALD1-211ENST00000445569 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
CALD1-211ENST00000445569 PNMA6EA0A0J9YXQ4 647 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 SRGAP3O43295 1099 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 NBPF7P0C2Y1 421 aaPredicted RBP12.88□□□□□ -0.35
CALD1-211ENST00000445569 BECN1Q14457 450 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 DDB1Q16531 1140 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 KIF1BPQ96EK5 621 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 OSBPL3Q9H4L5 887 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 USP16Q9Y5T5 823 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 ANKRD36CQ5JPF3 1778 aa12.88□□□□□ -0.35
CALD1-211ENST00000445569 RREB1Q92766 1687 aa12.87□□□□□ -0.35
CALD1-211ENST00000445569 STARD3NLO95772 234 aa12.87□□□□□ -0.35
CALD1-211ENST00000445569 GCKRQ14397 625 aa12.87□□□□□ -0.35
CALD1-211ENST00000445569 MYD88Q99836 296 aa12.87□□□□□ -0.35
CALD1-211ENST00000445569 APBB1O00213 710 aa12.86□□□□□ -0.35
CALD1-211ENST00000445569 MX1P20591 662 aa12.86□□□□□ -0.35
CALD1-211ENST00000445569 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
CALD1-211ENST00000445569 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
CALD1-211ENST00000445569 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
CALD1-211ENST00000445569 AK9Q5TCS8 1911 aa12.86□□□□□ -0.35
CALD1-211ENST00000445569 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
CALD1-211ENST00000445569 SURF6O75683 361 aaKnown RBP12.85□□□□□ -0.35
CALD1-211ENST00000445569 IGKV5-2P06315 115 aa12.85□□□□□ -0.35
CALD1-211ENST00000445569 SF3B2Q13435 895 aaKnown RBP12.85□□□□□ -0.35
CALD1-211ENST00000445569 OS9Q13438 667 aaPredicted RBP12.85□□□□□ -0.35
CALD1-211ENST00000445569 PIGBQ92521 554 aa12.85□□□□□ -0.35
CALD1-211ENST00000445569 GPATCH3Q96I76 525 aa12.85□□□□□ -0.35
CALD1-211ENST00000445569 SALL3Q9BXA9 1300 aa12.85□□□□□ -0.35
CALD1-211ENST00000445569 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
CALD1-211ENST00000445569 GSPT1P15170 499 aaKnown RBP12.84□□□□□ -0.35
CALD1-211ENST00000445569 PDE1AP54750 535 aa12.84□□□□□ -0.35
CALD1-211ENST00000445569 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
CALD1-211ENST00000445569 TBC1D9Q6ZT07 1266 aa12.84□□□□□ -0.35
CALD1-211ENST00000445569 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
CALD1-211ENST00000445569 C22orf23Q9BZE7 217 aa12.84□□□□□ -0.35
CALD1-211ENST00000445569 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
CALD1-211ENST00000445569 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
CALD1-211ENST00000445569 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
CALD1-211ENST00000445569 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
CALD1-211ENST00000445569 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
CALD1-211ENST00000445569 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
CALD1-211ENST00000445569 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
CALD1-211ENST00000445569 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
CALD1-211ENST00000445569 NHSQ6T4R5 1651 aa12.83□□□□□ -0.36
CALD1-211ENST00000445569 SEC24BO95487 1268 aa12.82□□□□□ -0.36
CALD1-211ENST00000445569 HSP90AB3PQ58FF7 597 aa12.82□□□□□ -0.36
CALD1-211ENST00000445569 CCDC191Q8NCU4 936 aa12.82□□□□□ -0.36
CALD1-211ENST00000445569 RHPN1Q8TCX5 695 aa12.82□□□□□ -0.36
CALD1-211ENST00000445569 CWC25Q9NXE8 425 aaPredicted RBP12.82□□□□□ -0.36
CALD1-211ENST00000445569 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
CALD1-211ENST00000445569 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
CALD1-211ENST00000445569 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
CALD1-211ENST00000445569 REC8O95072 547 aa12.81□□□□□ -0.36
CALD1-211ENST00000445569 RBM25P49756 843 aaKnown RBP12.81□□□□□ -0.36
CALD1-211ENST00000445569 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
CALD1-211ENST00000445569 CLASRPQ8N2M8 674 aaKnown RBP12.81□□□□□ -0.36
CALD1-211ENST00000445569 SMARCC1Q92922 1105 aaPredicted RBP12.81□□□□□ -0.36
CALD1-211ENST00000445569 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
CALD1-211ENST00000445569 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
CALD1-211ENST00000445569 BICC1Q9H694 974 aaKnown RBP12.81□□□□□ -0.36
CALD1-211ENST00000445569 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
CALD1-211ENST00000445569 EP400Q96L91 3159 aa12.81□□□□□ -0.36
CALD1-211ENST00000445569 A0A087WZG4 1122 aa12.8□□□□□ -0.36
CALD1-211ENST00000445569 ERC2O15083 957 aa12.8□□□□□ -0.36
CALD1-211ENST00000445569 A1BGP04217 495 aa12.8□□□□□ -0.36
CALD1-211ENST00000445569 G3BP1Q13283 466 aaKnown RBP eCLIP12.8□□□□□ -0.36
CALD1-211ENST00000445569 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
CALD1-211ENST00000445569 UBE3BQ7Z3V4 1068 aa12.8□□□□□ -0.36
CALD1-211ENST00000445569 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
CALD1-211ENST00000445569 C16orf71Q8IYS4 520 aaPredicted RBP12.8□□□□□ -0.36
CALD1-211ENST00000445569 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms