RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 RHPN1Q8TCX5 695 aa23.22■■□□□ 1.31
SEMA3D-202ENST00000444867 NWD2Q9ULI1 1742 aa23.22■■□□□ 1.31
SEMA3D-202ENST00000444867 GCKRQ14397 625 aa23.22■■□□□ 1.31
SEMA3D-202ENST00000444867 MYD88Q99836 296 aa23.22■■□□□ 1.31
SEMA3D-202ENST00000444867 CDCA7Q9BWT1 371 aaPredicted RBP23.22■■□□□ 1.31
SEMA3D-202ENST00000444867 COL15A1P39059 1388 aa23.22■■□□□ 1.31
SEMA3D-202ENST00000444867 ERC1Q8IUD2 1116 aa23.21■■□□□ 1.31
SEMA3D-202ENST00000444867 BCL11AQ9H165 835 aa23.21■■□□□ 1.31
SEMA3D-202ENST00000444867 SUCLG2Q96I99 432 aa23.2■■□□□ 1.3
SEMA3D-202ENST00000444867 JCADQ9P266 1359 aa23.19■■□□□ 1.3
SEMA3D-202ENST00000444867 VSIG10Q8N0Z9 540 aa23.19■■□□□ 1.3
SEMA3D-202ENST00000444867 TEX13AQ9BXU3 409 aaPredicted RBP23.19■■□□□ 1.3
SEMA3D-202ENST00000444867 THRAP3Q9Y2W1 955 aaKnown RBP23.19■■□□□ 1.3
SEMA3D-202ENST00000444867 NBPF26B4DH59 902 aa23.18■■□□□ 1.3
SEMA3D-202ENST00000444867 NBPF14Q5TI25 921 aa23.18■■□□□ 1.3
SEMA3D-202ENST00000444867 NBPF10Q6P3W6 841 aaKnown RBP23.18■■□□□ 1.3
SEMA3D-202ENST00000444867 NBPF15Q8N660 670 aa23.18■■□□□ 1.3
SEMA3D-202ENST00000444867 KAZALD1Q96I82 304 aa23.18■■□□□ 1.3
SEMA3D-202ENST00000444867 TBC1D2Q9BYX2 928 aa23.18■■□□□ 1.3
SEMA3D-202ENST00000444867 AK9Q5TCS8 1911 aa23.17■■□□□ 1.3
SEMA3D-202ENST00000444867 EXOC5O00471 708 aa23.17■■□□□ 1.3
SEMA3D-202ENST00000444867 BICC1Q9H694 974 aaKnown RBP23.17■■□□□ 1.3
SEMA3D-202ENST00000444867 IL1RAPL2Q9NP60 686 aa23.16■■□□□ 1.3
SEMA3D-202ENST00000444867 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
SEMA3D-202ENST00000444867 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
SEMA3D-202ENST00000444867 PIP4K2AP48426 406 aaPredicted RBP23.15■■□□□ 1.3
SEMA3D-202ENST00000444867 MYT1Q01538 1121 aa23.15■■□□□ 1.3
SEMA3D-202ENST00000444867 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
SEMA3D-202ENST00000444867 SNX21Q969T3 373 aa23.15■■□□□ 1.3
SEMA3D-202ENST00000444867 PIGBQ92521 554 aa23.15■■□□□ 1.3
SEMA3D-202ENST00000444867 BCL9O00512 1426 aa23.15■■□□□ 1.3
SEMA3D-202ENST00000444867 REC8O95072 547 aa23.14■■□□□ 1.29
SEMA3D-202ENST00000444867 SPATA31A1Q5TZJ5 1347 aa23.13■■□□□ 1.29
SEMA3D-202ENST00000444867 A1BGP04217 495 aa23.13■■□□□ 1.29
SEMA3D-202ENST00000444867 TTC41PQ6P2S7 1318 aa23.13■■□□□ 1.29
SEMA3D-202ENST00000444867 ERC2O15083 957 aa23.12■■□□□ 1.29
SEMA3D-202ENST00000444867 CLASRPQ8N2M8 674 aaKnown RBP23.12■■□□□ 1.29
SEMA3D-202ENST00000444867 ATG3Q9NT62 314 aa23.12■■□□□ 1.29
SEMA3D-202ENST00000444867 DOT1LQ8TEK3 1739 aa23.12■■□□□ 1.29
SEMA3D-202ENST00000444867 TJP1Q07157 1748 aa23.12■■□□□ 1.29
SEMA3D-202ENST00000444867 NUTM2BA6NNL0 878 aaPredicted RBP23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 NUTM2EB1AL46 878 aaPredicted RBP23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 NUTM1Q86Y26 1132 aa23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 NUTM2AQ8IVF1 878 aaPredicted RBP23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 HSCBQ8IWL3 235 aa23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 USP26Q9BXU7 913 aa23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 ADAMTS2O95450 1211 aa23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 G3BP1Q13283 466 aaKnown RBP eCLIP23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 RABL6Q3YEC7 729 aaPredicted RBP23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 KIF2CQ99661 725 aa23.11■■□□□ 1.29
SEMA3D-202ENST00000444867 SLIT2O94813 1529 aa23.1■■□□□ 1.29
SEMA3D-202ENST00000444867 TSHZ3Q63HK5 1081 aa23.1■■□□□ 1.29
SEMA3D-202ENST00000444867 ASAP1Q9ULH1 1129 aa23.1■■□□□ 1.29
SEMA3D-202ENST00000444867 STARD3NLO95772 234 aa23.09■■□□□ 1.29
SEMA3D-202ENST00000444867 TTLL7Q6ZT98 887 aa23.09■■□□□ 1.29
SEMA3D-202ENST00000444867 PI4K2BQ8TCG2 481 aa23.09■■□□□ 1.29
SEMA3D-202ENST00000444867 A0A087WZG4 1122 aa23.08■■□□□ 1.29
SEMA3D-202ENST00000444867 TRIM6-TRIM34B2RNG4 842 aa23.08■■□□□ 1.29
SEMA3D-202ENST00000444867 CASP7P55210 303 aa23.08■■□□□ 1.29
SEMA3D-202ENST00000444867 NBR1Q14596 966 aa23.08■■□□□ 1.29
SEMA3D-202ENST00000444867 GPATCH3Q96I76 525 aa23.08■■□□□ 1.29
SEMA3D-202ENST00000444867 CWC25Q9NXE8 425 aaPredicted RBP23.08■■□□□ 1.29
SEMA3D-202ENST00000444867 PA2G4Q9UQ80 394 aaKnown RBP23.08■■□□□ 1.29
SEMA3D-202ENST00000444867 H7C1W4 665 aa23.08■■□□□ 1.28
SEMA3D-202ENST00000444867 RTL5Q5HYW3 569 aaPredicted RBP23.08■■□□□ 1.28
SEMA3D-202ENST00000444867 CCDC191Q8NCU4 936 aa23.08■■□□□ 1.28
SEMA3D-202ENST00000444867 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
SEMA3D-202ENST00000444867 SPATA31A6Q5VVP1 1343 aa23.07■■□□□ 1.28
SEMA3D-202ENST00000444867 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
SEMA3D-202ENST00000444867 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.07■■□□□ 1.28
SEMA3D-202ENST00000444867 ATP5J2-PTCD1G3V325 749 aa23.07■■□□□ 1.28
SEMA3D-202ENST00000444867 GLRX3O76003 335 aaKnown RBP23.07■■□□□ 1.28
SEMA3D-202ENST00000444867 UBE3BQ7Z3V4 1068 aa23.07■■□□□ 1.28
SEMA3D-202ENST00000444867 COPRSQ9NQ92 184 aa23.07■■□□□ 1.28
SEMA3D-202ENST00000444867 CHMLP26374 656 aa23.06■■□□□ 1.28
SEMA3D-202ENST00000444867 EPHA10Q5JZY3 1008 aa23.06■■□□□ 1.28
SEMA3D-202ENST00000444867 DNAJC10Q8IXB1 793 aa23.06■■□□□ 1.28
SEMA3D-202ENST00000444867 RILPL2Q969X0 211 aa23.06■■□□□ 1.28
SEMA3D-202ENST00000444867 ESYT1Q9BSJ8 1104 aa23.06■■□□□ 1.28
SEMA3D-202ENST00000444867 EPB41L2O43491 1005 aaKnown RBP23.05■■□□□ 1.28
SEMA3D-202ENST00000444867 IFIT2P09913 472 aaKnown RBP23.05■■□□□ 1.28
SEMA3D-202ENST00000444867 RABEP1Q15276 862 aa23.05■■□□□ 1.28
SEMA3D-202ENST00000444867 DDB1Q16531 1140 aa23.05■■□□□ 1.28
SEMA3D-202ENST00000444867 BARGINQ6ZT62 677 aa23.05■■□□□ 1.28
SEMA3D-202ENST00000444867 CNTROBQ8N137 903 aa23.04■■□□□ 1.28
SEMA3D-202ENST00000444867 RBM42Q9BTD8 480 aaKnown RBP23.04■■□□□ 1.28
SEMA3D-202ENST00000444867 SASH1O94885 1247 aa23.04■■□□□ 1.28
SEMA3D-202ENST00000444867 ANTXR1Q9H6X2 564 aa23.04■■□□□ 1.28
SEMA3D-202ENST00000444867 ECHDC1Q9NTX5 307 aa23.04■■□□□ 1.28
SEMA3D-202ENST00000444867 KAT6BQ8WYB5 2073 aa23.04■■□□□ 1.28
SEMA3D-202ENST00000444867 RFX5P48382 616 aaPredicted RBP23.03■■□□□ 1.28
SEMA3D-202ENST00000444867 KIF6Q6ZMV9 814 aa23.03■■□□□ 1.28
SEMA3D-202ENST00000444867 ISCA1Q9BUE6 129 aa23.03■■□□□ 1.28
SEMA3D-202ENST00000444867 ZBTB3Q9H5J0 574 aa23.03■■□□□ 1.28
SEMA3D-202ENST00000444867 CICQ96RK0 1608 aaPredicted RBP23.02■■□□□ 1.28
SEMA3D-202ENST00000444867 ANKRD36CQ5JPF3 1778 aa23.02■■□□□ 1.28
SEMA3D-202ENST00000444867 TRIM28Q13263 835 aaKnown RBP23.02■■□□□ 1.28
SEMA3D-202ENST00000444867 MEX3CQ5U5Q3 659 aaKnown RBP23.01■■□□□ 1.27
SEMA3D-202ENST00000444867 AACSQ86V21 672 aa23.01■■□□□ 1.27
SEMA3D-202ENST00000444867 UNC5CLQ8IV45 518 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms