RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 ZNF530Q6P9A1 599 aaPredicted RBP26.12■■□□□ 1.77
SKIDA1-201ENST00000444772 CWC27Q6UX04 472 aaKnown RBP26.12■■□□□ 1.77
SKIDA1-201ENST00000444772 ECHDC1Q9NTX5 307 aa26.12■■□□□ 1.77
SKIDA1-201ENST00000444772 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.12■■□□□ 1.77
SKIDA1-201ENST00000444772 UVSSAQ2YD98 709 aa26.11■■□□□ 1.77
SKIDA1-201ENST00000444772 TM6SF1Q9BZW5 370 aa26.11■■□□□ 1.77
SKIDA1-201ENST00000444772 RASEFQ8IZ41 740 aa26.11■■□□□ 1.77
SKIDA1-201ENST00000444772 STX6O43752 255 aa26.1■■□□□ 1.77
SKIDA1-201ENST00000444772 RUFY3Q7L099 469 aa26.1■■□□□ 1.77
SKIDA1-201ENST00000444772 KCNB2Q92953 911 aa26.1■■□□□ 1.77
SKIDA1-201ENST00000444772 ZSCAN31Q96LW9 406 aaPredicted RBP26.1■■□□□ 1.77
SKIDA1-201ENST00000444772 SMC3Q9UQE7 1217 aa26.1■■□□□ 1.77
SKIDA1-201ENST00000444772 CCDC183Q5T5S1 534 aa26.09■■□□□ 1.77
SKIDA1-201ENST00000444772 VPS53Q5VIR6 699 aa26.09■■□□□ 1.77
SKIDA1-201ENST00000444772 C9orf78Q9NZ63 289 aaPredicted RBP26.09■■□□□ 1.77
SKIDA1-201ENST00000444772 KCNQ3O43525 872 aa26.09■■□□□ 1.77
SKIDA1-201ENST00000444772 GADD45BO75293 160 aaPredicted RBP26.09■■□□□ 1.77
SKIDA1-201ENST00000444772 KSR2Q6VAB6 950 aa26.09■■□□□ 1.77
SKIDA1-201ENST00000444772 SH2B1Q9NRF2 756 aaPredicted RBP26.09■■□□□ 1.77
SKIDA1-201ENST00000444772 PDIA4P13667 645 aaKnown RBP26.08■■□□□ 1.76
SKIDA1-201ENST00000444772 UBE2HP62256 183 aa26.08■■□□□ 1.76
SKIDA1-201ENST00000444772 C1orf141Q5JVX7 400 aa26.08■■□□□ 1.76
SKIDA1-201ENST00000444772 RNF214Q8ND24 703 aa26.08■■□□□ 1.76
SKIDA1-201ENST00000444772 EVI5LQ96CN4 794 aa26.08■■□□□ 1.76
SKIDA1-201ENST00000444772 HEG1Q9ULI3 1381 aa26.08■■□□□ 1.76
SKIDA1-201ENST00000444772 RNMTO43148 476 aaKnown RBP26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 SYT1P21579 422 aa26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 GLIPR1L2Q4G1C9 344 aa26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 HYPKQ9NX55 129 aa26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 HIP1O00291 1037 aa26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 IFIT2P09913 472 aaKnown RBP26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 CASTP20810 708 aaKnown RBP26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 PSME1Q06323 249 aa26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 GDPD2Q9HCC8 539 aa26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 SPG7Q9UQ90 795 aa26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 CHD2O14647 1828 aaKnown RBP26.07■■□□□ 1.76
SKIDA1-201ENST00000444772 MAP3K2Q9Y2U5 619 aa26.06■■□□□ 1.76
SKIDA1-201ENST00000444772 F13A1P00488 732 aa26.06■■□□□ 1.76
SKIDA1-201ENST00000444772 GIGYF1O75420 1035 aaPredicted RBP26.05■■□□□ 1.76
SKIDA1-201ENST00000444772 ZSWIM6Q9HCJ5 1215 aa26.05■■□□□ 1.76
SKIDA1-201ENST00000444772 LMTK3Q96Q04 1460 aa26.05■■□□□ 1.76
SKIDA1-201ENST00000444772 MPRIPQ6WCQ1 1025 aa26.04■■□□□ 1.76
SKIDA1-201ENST00000444772 CYP46A1Q9Y6A2 500 aa26.04■■□□□ 1.76
SKIDA1-201ENST00000444772 PDRG1Q9NUG6 133 aa26.04■■□□□ 1.76
SKIDA1-201ENST00000444772 ANXA1P04083 346 aa26.03■■□□□ 1.76
SKIDA1-201ENST00000444772 FOXD4L6Q3SYB3 417 aaPredicted RBP26.03■■□□□ 1.76
SKIDA1-201ENST00000444772 FOXD4L3Q6VB84 417 aaPredicted RBP26.03■■□□□ 1.76
SKIDA1-201ENST00000444772 CNPY2Q9Y2B0 182 aa26.03■■□□□ 1.76
SKIDA1-201ENST00000444772 UTYO14607 1347 aa26.03■■□□□ 1.76
SKIDA1-201ENST00000444772 ZKSCAN1P17029 563 aaPredicted RBP26.03■■□□□ 1.76
SKIDA1-201ENST00000444772 LINS1Q8NG48 757 aa26.03■■□□□ 1.76
SKIDA1-201ENST00000444772 TCHHQ07283 1943 aa26.03■■□□□ 1.76
SKIDA1-201ENST00000444772 RGPD2P0DJD1 1756 aa26.02■■□□□ 1.76
SKIDA1-201ENST00000444772 DDX58O95786 925 aaKnown RBP26.02■■□□□ 1.76
SKIDA1-201ENST00000444772 JAKMIP1Q96N16 626 aaKnown RBP26.01■■□□□ 1.76
SKIDA1-201ENST00000444772 NECTIN1Q15223 517 aa26.01■■□□□ 1.75
SKIDA1-201ENST00000444772 CCDC171Q6TFL3 1326 aa26.01■■□□□ 1.75
SKIDA1-201ENST00000444772 PTMAP06454 111 aaKnown RBP26.01■■□□□ 1.75
SKIDA1-201ENST00000444772 PTH1RQ03431 593 aa26.01■■□□□ 1.75
SKIDA1-201ENST00000444772 LRRC59Q96AG4 307 aaKnown RBP26.01■■□□□ 1.75
SKIDA1-201ENST00000444772 SNRKQ9NRH2 765 aa26.01■■□□□ 1.75
SKIDA1-201ENST00000444772 XPCQ01831 940 aaPredicted RBP26■■□□□ 1.75
SKIDA1-201ENST00000444772 PRPF40BQ6NWY9 871 aaKnown RBP26■■□□□ 1.75
SKIDA1-201ENST00000444772 ARHGEF25Q86VW2 580 aa26■■□□□ 1.75
SKIDA1-201ENST00000444772 GRM8O00222 908 aa25.99■■□□□ 1.75
SKIDA1-201ENST00000444772 ESCO1Q5FWF5 840 aa25.99■■□□□ 1.75
SKIDA1-201ENST00000444772 AACSQ86V21 672 aa25.99■■□□□ 1.75
SKIDA1-201ENST00000444772 SETD1BQ9UPS6 1966 aaKnown RBP25.99■■□□□ 1.75
SKIDA1-201ENST00000444772 ANKLE2Q86XL3 938 aa25.99■■□□□ 1.75
SKIDA1-201ENST00000444772 SLIT3O75094 1523 aa25.99■■□□□ 1.75
SKIDA1-201ENST00000444772 GJB2P29033 226 aa25.98■■□□□ 1.75
SKIDA1-201ENST00000444772 PXDNQ92626 1479 aa25.98■■□□□ 1.75
SKIDA1-201ENST00000444772 PSMA5P28066 241 aa25.98■■□□□ 1.75
SKIDA1-201ENST00000444772 G3BP1Q13283 466 aaKnown RBP eCLIP25.98■■□□□ 1.75
SKIDA1-201ENST00000444772 R3HCC1Q9Y3T6 440 aaKnown RBP25.98■■□□□ 1.75
SKIDA1-201ENST00000444772 ADAMTSL3P82987 1691 aa25.97■■□□□ 1.75
SKIDA1-201ENST00000444772 DDX21Q9NR30 783 aaKnown RBP eCLIP25.97■■□□□ 1.75
SKIDA1-201ENST00000444772 MTMR6Q9Y217 621 aa25.97■■□□□ 1.75
SKIDA1-201ENST00000444772 CAMTA1Q9Y6Y1 1673 aa25.97■■□□□ 1.75
SKIDA1-201ENST00000444772 ZBTB7CA1YPR0 619 aa25.97■■□□□ 1.75
SKIDA1-201ENST00000444772 GCP02774 474 aa25.97■■□□□ 1.75
SKIDA1-201ENST00000444772 CCDC83Q8IWF9 413 aa25.97■■□□□ 1.75
SKIDA1-201ENST00000444772 MAP4K1Q92918 833 aa25.97■■□□□ 1.75
SKIDA1-201ENST00000444772 PROSER3Q2NL68 480 aa25.96■■□□□ 1.75
SKIDA1-201ENST00000444772 ADCK5Q3MIX3 580 aa25.96■■□□□ 1.75
SKIDA1-201ENST00000444772 PDCL3Q9H2J4 239 aa25.96■■□□□ 1.75
SKIDA1-201ENST00000444772 PA2G4Q9UQ80 394 aaKnown RBP25.96■■□□□ 1.75
SKIDA1-201ENST00000444772 LARGE1O95461 756 aa25.96■■□□□ 1.75
SKIDA1-201ENST00000444772 SIPA1L3O60292 1781 aaPredicted RBP25.96■■□□□ 1.75
SKIDA1-201ENST00000444772 KIAA2012Q0VF49 1180 aa25.95■■□□□ 1.75
SKIDA1-201ENST00000444772 CWF19L2Q2TBE0 894 aaKnown RBP25.95■■□□□ 1.75
SKIDA1-201ENST00000444772 CPA1P15085 419 aa25.95■■□□□ 1.74
SKIDA1-201ENST00000444772 CREB3L3Q68CJ9 461 aa25.95■■□□□ 1.74
SKIDA1-201ENST00000444772 RBM8AQ9Y5S9 174 aaKnown RBP25.95■■□□□ 1.74
SKIDA1-201ENST00000444772 ADAMTS7Q9UKP4 1686 aa25.94■■□□□ 1.74
SKIDA1-201ENST00000444772 RNF20Q5VTR2 975 aa25.94■■□□□ 1.74
SKIDA1-201ENST00000444772 FIBPO43427 364 aa25.94■■□□□ 1.74
SKIDA1-201ENST00000444772 ANKRD1Q15327 319 aa25.94■■□□□ 1.74
SKIDA1-201ENST00000444772 ANKRD24Q8TF21 1146 aa25.94■■□□□ 1.74
SKIDA1-201ENST00000444772 LARP6Q9BRS8 491 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms