RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 USP16Q9Y5T5 823 aa13.42□□□□□ -0.26
HDLBP-221ENST00000444092 ARFGEF2Q9Y6D5 1785 aa13.42□□□□□ -0.26
HDLBP-221ENST00000444092 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-221ENST00000444092 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
HDLBP-221ENST00000444092 CNKSR1Q969H4 720 aa13.41□□□□□ -0.26
HDLBP-221ENST00000444092 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
HDLBP-221ENST00000444092 PPP2R1AP30153 589 aa13.4□□□□□ -0.26
HDLBP-221ENST00000444092 MCM10Q7L590 875 aa13.4□□□□□ -0.26
HDLBP-221ENST00000444092 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
HDLBP-221ENST00000444092 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.26
HDLBP-221ENST00000444092 PRAMEF22A3QJZ6 481 aa13.39□□□□□ -0.27
HDLBP-221ENST00000444092 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
HDLBP-221ENST00000444092 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-221ENST00000444092 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
HDLBP-221ENST00000444092 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
HDLBP-221ENST00000444092 NEFMP07197 916 aa13.38□□□□□ -0.27
HDLBP-221ENST00000444092 SRGNP10124 158 aa13.38□□□□□ -0.27
HDLBP-221ENST00000444092 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
HDLBP-221ENST00000444092 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
HDLBP-221ENST00000444092 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
HDLBP-221ENST00000444092 CLEC4GQ6UXB4 293 aa13.38□□□□□ -0.27
HDLBP-221ENST00000444092 HTATSF1O43719 755 aaKnown RBP13.37□□□□□ -0.27
HDLBP-221ENST00000444092 JMYQ8N9B5 988 aa13.37□□□□□ -0.27
HDLBP-221ENST00000444092 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
HDLBP-221ENST00000444092 LTBP3Q9NS15 1303 aa13.37□□□□□ -0.27
HDLBP-221ENST00000444092 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
HDLBP-221ENST00000444092 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-221ENST00000444092 TPTE2Q6XPS3 522 aa13.36□□□□□ -0.27
HDLBP-221ENST00000444092 NIP7Q9Y221 180 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDLBP-221ENST00000444092 NUP98P52948 1817 aa13.35□□□□□ -0.27
HDLBP-221ENST00000444092 POTECB2RU33 542 aa13.35□□□□□ -0.27
HDLBP-221ENST00000444092 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-221ENST00000444092 PCNTO95613 3336 aa13.35□□□□□ -0.27
HDLBP-221ENST00000444092 SCN4AP35499 1836 aa13.34□□□□□ -0.27
HDLBP-221ENST00000444092 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
HDLBP-221ENST00000444092 DDNO94850 711 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-221ENST00000444092 NPR1P16066 1061 aa13.34□□□□□ -0.27
HDLBP-221ENST00000444092 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
HDLBP-221ENST00000444092 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
HDLBP-221ENST00000444092 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
HDLBP-221ENST00000444092 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
HDLBP-221ENST00000444092 KDM3BQ7LBC6 1761 aa13.33□□□□□ -0.28
HDLBP-221ENST00000444092 NGEFQ8N5V2 710 aa13.33□□□□□ -0.28
HDLBP-221ENST00000444092 RGL2O15211 777 aa13.32□□□□□ -0.28
HDLBP-221ENST00000444092 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
HDLBP-221ENST00000444092 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
HDLBP-221ENST00000444092 IQCA1LA6NCM1 817 aa13.31□□□□□ -0.28
HDLBP-221ENST00000444092 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
HDLBP-221ENST00000444092 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
HDLBP-221ENST00000444092 HLFQ16534 295 aa13.31□□□□□ -0.28
HDLBP-221ENST00000444092 COL13A1Q5TAT6 717 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-221ENST00000444092 KLRG2A4D1S0 409 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-221ENST00000444092 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
HDLBP-221ENST00000444092 RTKN2Q8IZC4 609 aa13.3□□□□□ -0.28
HDLBP-221ENST00000444092 C7orf43Q8WVR3 580 aa13.3□□□□□ -0.28
HDLBP-221ENST00000444092 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
HDLBP-221ENST00000444092 ZNF277Q9NRM2 450 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-221ENST00000444092 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
HDLBP-221ENST00000444092 POTEIP0CG38 1075 aa13.29□□□□□ -0.28
HDLBP-221ENST00000444092 POTEJP0CG39 1038 aa13.29□□□□□ -0.28
HDLBP-221ENST00000444092 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
HDLBP-221ENST00000444092 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
HDLBP-221ENST00000444092 PNNQ9H307 717 aaKnown RBP13.29□□□□□ -0.28
HDLBP-221ENST00000444092 MAPK8IP3Q9UPT6 1336 aa13.29□□□□□ -0.28
HDLBP-221ENST00000444092 ERVV-1B6SEH8 477 aa13.28□□□□□ -0.28
HDLBP-221ENST00000444092 MYL6BP14649 208 aa13.28□□□□□ -0.28
HDLBP-221ENST00000444092 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
HDLBP-221ENST00000444092 OLFM4Q6UX06 510 aa13.28□□□□□ -0.28
HDLBP-221ENST00000444092 NUTM1Q86Y26 1132 aa13.28□□□□□ -0.28
HDLBP-221ENST00000444092 TNS4Q8IZW8 715 aa13.28□□□□□ -0.28
HDLBP-221ENST00000444092 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
HDLBP-221ENST00000444092 IARSP41252 1262 aaKnown RBP13.27□□□□□ -0.29
HDLBP-221ENST00000444092 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
HDLBP-221ENST00000444092 EAPPQ56P03 285 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-221ENST00000444092 LDHDQ86WU2 507 aa13.27□□□□□ -0.29
HDLBP-221ENST00000444092 SYNE4Q8N205 404 aa13.27□□□□□ -0.29
HDLBP-221ENST00000444092 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-221ENST00000444092 TAF1DQ9H5J8 278 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-221ENST00000444092 MKRN1Q9UHC7 482 aaKnown RBP13.27□□□□□ -0.29
HDLBP-221ENST00000444092 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
HDLBP-221ENST00000444092 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.29
HDLBP-221ENST00000444092 CAPN15O75808 1086 aa13.26□□□□□ -0.29
HDLBP-221ENST00000444092 GPTP24298 496 aa13.26□□□□□ -0.29
HDLBP-221ENST00000444092 TTLL7Q6ZT98 887 aa13.26□□□□□ -0.29
HDLBP-221ENST00000444092 JDP2Q8WYK2 163 aa13.26□□□□□ -0.29
HDLBP-221ENST00000444092 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
HDLBP-221ENST00000444092 PLEKHF1Q96S99 279 aa13.26□□□□□ -0.29
HDLBP-221ENST00000444092 THUMPD2Q9BTF0 503 aaKnown RBP13.26□□□□□ -0.29
HDLBP-221ENST00000444092 ZNF541Q9H0D2 1346 aa13.26□□□□□ -0.29
HDLBP-221ENST00000444092 ZBTB3Q9H5J0 574 aa13.26□□□□□ -0.29
HDLBP-221ENST00000444092 HACL1Q9UJ83 578 aa13.26□□□□□ -0.29
HDLBP-221ENST00000444092 ABCC12Q96J65 1359 aa13.25□□□□□ -0.29
HDLBP-221ENST00000444092 EPHX2P34913 555 aa13.24□□□□□ -0.29
HDLBP-221ENST00000444092 CRY2Q49AN0 593 aa13.24□□□□□ -0.29
HDLBP-221ENST00000444092 CC2D2BQ6DHV5 1058 aa13.24□□□□□ -0.29
HDLBP-221ENST00000444092 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
HDLBP-221ENST00000444092 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
HDLBP-221ENST00000444092 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
HDLBP-221ENST00000444092 PASKQ96RG2 1323 aa13.23□□□□□ -0.29
HDLBP-221ENST00000444092 FZD9O00144 591 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms