RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 ZNF219Q9P2Y4 722 aaPredicted RBP26.4■■□□□ 1.82
EDEM1-203ENST00000443790 ZNF652Q9Y2D9 606 aa26.4■■□□□ 1.82
EDEM1-203ENST00000443790 LAMB4A4D0S4 1761 aa26.4■■□□□ 1.82
EDEM1-203ENST00000443790 ARFGEF2Q9Y6D5 1785 aa26.39■■□□□ 1.82
EDEM1-203ENST00000443790 NBPF26B4DH59 902 aa26.39■■□□□ 1.82
EDEM1-203ENST00000443790 TAF7Q15545 349 aaPredicted RBP26.39■■□□□ 1.82
EDEM1-203ENST00000443790 STYK1Q6J9G0 422 aa26.39■■□□□ 1.82
EDEM1-203ENST00000443790 NBPF10Q6P3W6 841 aaKnown RBP26.39■■□□□ 1.82
EDEM1-203ENST00000443790 NBPF15Q8N660 670 aa26.39■■□□□ 1.82
EDEM1-203ENST00000443790 CNKSR1Q969H4 720 aa26.39■■□□□ 1.82
EDEM1-203ENST00000443790 SRGNP10124 158 aa26.38■■□□□ 1.81
EDEM1-203ENST00000443790 NBPF5PQ86XG9 351 aaPredicted RBP26.38■■□□□ 1.81
EDEM1-203ENST00000443790 SMC1BQ8NDV3 1235 aa26.38■■□□□ 1.81
EDEM1-203ENST00000443790 DLG5Q8TDM6 1919 aa26.37■■□□□ 1.81
EDEM1-203ENST00000443790 CACNA1SQ13698 1873 aa26.37■■□□□ 1.81
EDEM1-203ENST00000443790 RGL2O15211 777 aa26.37■■□□□ 1.81
EDEM1-203ENST00000443790 NEFMP07197 916 aa26.37■■□□□ 1.81
EDEM1-203ENST00000443790 VEGFAP15692 232 aaPredicted RBP26.37■■□□□ 1.81
EDEM1-203ENST00000443790 SLX4Q8IY92 1834 aa26.37■■□□□ 1.81
EDEM1-203ENST00000443790 LTBP3Q9NS15 1303 aa26.37■■□□□ 1.81
EDEM1-203ENST00000443790 KDM3BQ7LBC6 1761 aa26.36■■□□□ 1.81
EDEM1-203ENST00000443790 DICER1Q9UPY3 1922 aaKnown RBP26.36■■□□□ 1.81
EDEM1-203ENST00000443790 PRPF40BQ6NWY9 871 aaKnown RBP26.36■■□□□ 1.81
EDEM1-203ENST00000443790 MASTLQ96GX5 879 aa26.36■■□□□ 1.81
EDEM1-203ENST00000443790 HTRA3P83110 453 aa26.35■■□□□ 1.81
EDEM1-203ENST00000443790 TAOK3Q9H2K8 898 aa26.35■■□□□ 1.81
EDEM1-203ENST00000443790 MIS18AQ9NYP9 233 aa26.35■■□□□ 1.81
EDEM1-203ENST00000443790 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
EDEM1-203ENST00000443790 ERFEQ4G0M1 354 aa26.34■■□□□ 1.81
EDEM1-203ENST00000443790 PLEKHF1Q96S99 279 aa26.34■■□□□ 1.81
EDEM1-203ENST00000443790 SOGA3Q5TF21 947 aa26.33■■□□□ 1.81
EDEM1-203ENST00000443790 PNISRQ8TF01 805 aaKnown RBP26.33■■□□□ 1.81
EDEM1-203ENST00000443790 NIP7Q9Y221 180 aaKnown RBP eCLIP26.33■■□□□ 1.81
EDEM1-203ENST00000443790 DPY19L2Q6NUT2 758 aa26.32■■□□□ 1.8
EDEM1-203ENST00000443790 TPTE2Q6XPS3 522 aa26.31■■□□□ 1.8
EDEM1-203ENST00000443790 KLRG1Q96E93 195 aa26.31■■□□□ 1.8
EDEM1-203ENST00000443790 POTECB2RU33 542 aa26.3■■□□□ 1.8
EDEM1-203ENST00000443790 NFE2L2Q16236 605 aa26.3■■□□□ 1.8
EDEM1-203ENST00000443790 KLRG2A4D1S0 409 aaPredicted RBP26.29■■□□□ 1.8
EDEM1-203ENST00000443790 NPR1P16066 1061 aa26.29■■□□□ 1.8
EDEM1-203ENST00000443790 HLFQ16534 295 aa26.29■■□□□ 1.8
EDEM1-203ENST00000443790 C7orf43Q8WVR3 580 aa26.28■■□□□ 1.8
EDEM1-203ENST00000443790 EIF4A1P60842 406 aaKnown RBP26.27■■□□□ 1.8
EDEM1-203ENST00000443790 THUMPD2Q9BTF0 503 aaKnown RBP26.27■■□□□ 1.8
EDEM1-203ENST00000443790 MAPK8IP3Q9UPT6 1336 aa26.26■■□□□ 1.79
EDEM1-203ENST00000443790 FAM177BA6PVY3 158 aa26.26■■□□□ 1.79
EDEM1-203ENST00000443790 CCDC93Q567U6 631 aa26.26■■□□□ 1.79
EDEM1-203ENST00000443790 JMYQ8N9B5 988 aa26.26■■□□□ 1.79
EDEM1-203ENST00000443790 PNNQ9H307 717 aaKnown RBP26.25■■□□□ 1.79
EDEM1-203ENST00000443790 NGEFQ8N5V2 710 aa26.24■■□□□ 1.79
EDEM1-203ENST00000443790 MAP3K15Q6ZN16 1313 aa26.23■■□□□ 1.79
EDEM1-203ENST00000443790 ERVV-1B6SEH8 477 aa26.23■■□□□ 1.79
EDEM1-203ENST00000443790 DDNO94850 711 aaPredicted RBP26.22■■□□□ 1.79
EDEM1-203ENST00000443790 RRP7AQ9Y3A4 280 aaKnown RBP26.22■■□□□ 1.79
EDEM1-203ENST00000443790 NUP98P52948 1817 aa26.22■■□□□ 1.79
EDEM1-203ENST00000443790 ABCC12Q96J65 1359 aa26.21■■□□□ 1.79
EDEM1-203ENST00000443790 GTF2E1P29083 439 aaPredicted RBP26.21■■□□□ 1.79
EDEM1-203ENST00000443790 KIF6Q6ZMV9 814 aa26.21■■□□□ 1.79
EDEM1-203ENST00000443790 TTLL7Q6ZT98 887 aa26.21■■□□□ 1.79
EDEM1-203ENST00000443790 NYXQ9GZU5 481 aa26.21■■□□□ 1.79
EDEM1-203ENST00000443790 MYL6BP14649 208 aa26.2■■□□□ 1.78
EDEM1-203ENST00000443790 FKBP4Q02790 459 aaKnown RBP eCLIP26.2■■□□□ 1.78
EDEM1-203ENST00000443790 OLFM4Q6UX06 510 aa26.19■■□□□ 1.78
EDEM1-203ENST00000443790 IBTKQ9P2D0 1353 aaPredicted RBP26.19■■□□□ 1.78
EDEM1-203ENST00000443790 ERBB4Q15303 1308 aa26.18■■□□□ 1.78
EDEM1-203ENST00000443790 ALDH1B1P30837 517 aa26.18■■□□□ 1.78
EDEM1-203ENST00000443790 CRY2Q49AN0 593 aa26.18■■□□□ 1.78
EDEM1-203ENST00000443790 NUTM1Q86Y26 1132 aa26.18■■□□□ 1.78
EDEM1-203ENST00000443790 RTKN2Q8IZC4 609 aa26.18■■□□□ 1.78
EDEM1-203ENST00000443790 RIC1Q4ADV7 1423 aa26.17■■□□□ 1.78
EDEM1-203ENST00000443790 RALBP1Q15311 655 aa26.17■■□□□ 1.78
EDEM1-203ENST00000443790 ZBTB3Q9H5J0 574 aa26.17■■□□□ 1.78
EDEM1-203ENST00000443790 ZNF277Q9NRM2 450 aaPredicted RBP26.17■■□□□ 1.78
EDEM1-203ENST00000443790 TSPYL4Q9UJ04 414 aa26.17■■□□□ 1.78
EDEM1-203ENST00000443790 UBN2Q6ZU65 1347 aa26.16■■□□□ 1.78
EDEM1-203ENST00000443790 L3MBTL3Q96JM7 780 aaPredicted RBP26.16■■□□□ 1.78
EDEM1-203ENST00000443790 PCNTO95613 3336 aa26.16■■□□□ 1.78
EDEM1-203ENST00000443790 SNED1Q8TER0 1413 aa26.15■■□□□ 1.78
EDEM1-203ENST00000443790 POTEIP0CG38 1075 aa26.15■■□□□ 1.78
EDEM1-203ENST00000443790 POTEJP0CG39 1038 aa26.15■■□□□ 1.78
EDEM1-203ENST00000443790 GPTP24298 496 aa26.15■■□□□ 1.78
EDEM1-203ENST00000443790 CHADLQ6NUI6 762 aa26.15■■□□□ 1.78
EDEM1-203ENST00000443790 IQCA1LA6NCM1 817 aa26.14■■□□□ 1.78
EDEM1-203ENST00000443790 RIPK4P57078 832 aa26.14■■□□□ 1.78
EDEM1-203ENST00000443790 SCN4AP35499 1836 aa26.14■■□□□ 1.77
EDEM1-203ENST00000443790 ZNF541Q9H0D2 1346 aa26.14■■□□□ 1.77
EDEM1-203ENST00000443790 IARSP41252 1262 aaKnown RBP26.12■■□□□ 1.77
EDEM1-203ENST00000443790 SUSD4Q5VX71 490 aa26.12■■□□□ 1.77
EDEM1-203ENST00000443790 GIGYF2Q6Y7W6 1299 aaKnown RBP26.12■■□□□ 1.77
EDEM1-203ENST00000443790 ZNF34Q8IZ26 560 aa26.12■■□□□ 1.77
EDEM1-203ENST00000443790 LRP10Q7Z4F1 713 aa26.11■■□□□ 1.77
EDEM1-203ENST00000443790 RPGRQ92834 1020 aaKnown RBP26.11■■□□□ 1.77
EDEM1-203ENST00000443790 BABAM1Q9NWV8 329 aa26.11■■□□□ 1.77
EDEM1-203ENST00000443790 NTSR2O95665 410 aa26.1■■□□□ 1.77
EDEM1-203ENST00000443790 HOXA10P31260 410 aaPredicted RBP26.1■■□□□ 1.77
EDEM1-203ENST00000443790 TMPOP42166 694 aaKnown RBP26.1■■□□□ 1.77
EDEM1-203ENST00000443790 LMOD3Q0VAK6 560 aa26.1■■□□□ 1.77
EDEM1-203ENST00000443790 SYNE4Q8N205 404 aa26.1■■□□□ 1.77
EDEM1-203ENST00000443790 PSMD1Q99460 953 aa26.1■■□□□ 1.77
EDEM1-203ENST00000443790 TAF1DQ9H5J8 278 aaPredicted RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms