RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 KLRG1Q96E93 195 aa13.52□□□□□ -0.25
HDLBP-219ENST00000442714 PLEKHF1Q96S99 279 aa13.52□□□□□ -0.25
HDLBP-219ENST00000442714 BRCA1P38398 1863 aaKnown RBP13.52□□□□□ -0.25
HDLBP-219ENST00000442714 LTBP3Q9NS15 1303 aa13.51□□□□□ -0.25
HDLBP-219ENST00000442714 ST5P78524 1137 aa13.51□□□□□ -0.25
HDLBP-219ENST00000442714 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
HDLBP-219ENST00000442714 NBPF5PQ86XG9 351 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-219ENST00000442714 HLFQ16534 295 aa13.5□□□□□ -0.25
HDLBP-219ENST00000442714 PRPF40BQ6NWY9 871 aaKnown RBP13.5□□□□□ -0.25
HDLBP-219ENST00000442714 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
HDLBP-219ENST00000442714 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
HDLBP-219ENST00000442714 NRXN2Q9P2S2 1712 aa13.5□□□□□ -0.25
HDLBP-219ENST00000442714 NPHP1O15259 732 aa13.49□□□□□ -0.25
HDLBP-219ENST00000442714 NPR1P16066 1061 aa13.49□□□□□ -0.25
HDLBP-219ENST00000442714 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
HDLBP-219ENST00000442714 PNISRQ8TF01 805 aaKnown RBP13.49□□□□□ -0.25
HDLBP-219ENST00000442714 TAOK3Q9H2K8 898 aa13.49□□□□□ -0.25
HDLBP-219ENST00000442714 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDLBP-219ENST00000442714 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
HDLBP-219ENST00000442714 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
HDLBP-219ENST00000442714 ERVV-1B6SEH8 477 aa13.47□□□□□ -0.25
HDLBP-219ENST00000442714 DDNO94850 711 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-219ENST00000442714 NFE2L2Q16236 605 aa13.47□□□□□ -0.25
HDLBP-219ENST00000442714 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
HDLBP-219ENST00000442714 PCNTO95613 3336 aa13.45□□□□□ -0.26
HDLBP-219ENST00000442714 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
HDLBP-219ENST00000442714 NEFMP07197 916 aa13.45□□□□□ -0.26
HDLBP-219ENST00000442714 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
HDLBP-219ENST00000442714 OLFM4Q6UX06 510 aa13.45□□□□□ -0.26
HDLBP-219ENST00000442714 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
HDLBP-219ENST00000442714 NGEFQ8N5V2 710 aa13.45□□□□□ -0.26
HDLBP-219ENST00000442714 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
HDLBP-219ENST00000442714 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
HDLBP-219ENST00000442714 RRP7AQ9Y3A4 280 aaKnown RBP13.45□□□□□ -0.26
HDLBP-219ENST00000442714 SBF1O95248 1867 aa13.44□□□□□ -0.26
HDLBP-219ENST00000442714 CRY2Q49AN0 593 aa13.44□□□□□ -0.26
HDLBP-219ENST00000442714 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
HDLBP-219ENST00000442714 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
HDLBP-219ENST00000442714 TTLL7Q6ZT98 887 aa13.44□□□□□ -0.26
HDLBP-219ENST00000442714 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
HDLBP-219ENST00000442714 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
HDLBP-219ENST00000442714 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-219ENST00000442714 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-219ENST00000442714 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.261e-6■■□□□ 12.8
HDLBP-219ENST00000442714 COL13A1Q5TAT6 717 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-219ENST00000442714 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
HDLBP-219ENST00000442714 L3MBTL3Q96JM7 780 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-219ENST00000442714 ZNF277Q9NRM2 450 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-219ENST00000442714 MAP3K15Q6ZN16 1313 aa13.42□□□□□ -0.26
HDLBP-219ENST00000442714 PDIA6Q15084 440 aa13.42□□□□□ -0.26
HDLBP-219ENST00000442714 SYNE4Q8N205 404 aa13.42□□□□□ -0.26
HDLBP-219ENST00000442714 NYXQ9GZU5 481 aa13.42□□□□□ -0.26
HDLBP-219ENST00000442714 SIPA1L3O60292 1781 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-219ENST00000442714 FZD9O00144 591 aa13.41□□□□□ -0.26
HDLBP-219ENST00000442714 MYL6BP14649 208 aa13.41□□□□□ -0.26
HDLBP-219ENST00000442714 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
HDLBP-219ENST00000442714 LRP10Q7Z4F1 713 aa13.41□□□□□ -0.26
HDLBP-219ENST00000442714 NUTM1Q86Y26 1132 aa13.41□□□□□ -0.26
HDLBP-219ENST00000442714 TAF1DQ9H5J8 278 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-219ENST00000442714 IQCA1LA6NCM1 817 aa13.4□□□□□ -0.26
HDLBP-219ENST00000442714 ITGBL1O95965 494 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-219ENST00000442714 RIPK4P57078 832 aa13.4□□□□□ -0.26
HDLBP-219ENST00000442714 GIGYF2Q6Y7W6 1299 aaKnown RBP13.4□□□□□ -0.26
HDLBP-219ENST00000442714 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
HDLBP-219ENST00000442714 RALBP1Q15311 655 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 SLC10A5Q5PT55 438 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 KIF6Q6ZMV9 814 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 PSMD1Q99460 953 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 ZBTB3Q9H5J0 574 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 SLX4Q8IY92 1834 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 UBN2Q6ZU65 1347 aa13.39□□□□□ -0.27
HDLBP-219ENST00000442714 ANKRD31Q8N7Z5 1873 aa13.38□□□□□ -0.27
HDLBP-219ENST00000442714 GPTP24298 496 aa13.38□□□□□ -0.27
HDLBP-219ENST00000442714 IARSP41252 1262 aaKnown RBP13.38□□□□□ -0.27
HDLBP-219ENST00000442714 LDHDQ86WU2 507 aa13.38□□□□□ -0.27
HDLBP-219ENST00000442714 CRAMP1Q96RY5 1269 aa13.38□□□□□ -0.27
HDLBP-219ENST00000442714 ERBB4Q15303 1308 aa13.38□□□□□ -0.27
HDLBP-219ENST00000442714 PASKQ96RG2 1323 aa13.38□□□□□ -0.27
HDLBP-219ENST00000442714 ZNF541Q9H0D2 1346 aa13.38□□□□□ -0.27
HDLBP-219ENST00000442714 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
HDLBP-219ENST00000442714 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
HDLBP-219ENST00000442714 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
HDLBP-219ENST00000442714 TSPYL4Q9UJ04 414 aa13.37□□□□□ -0.27
HDLBP-219ENST00000442714 HACL1Q9UJ83 578 aa13.37□□□□□ -0.27
HDLBP-219ENST00000442714 DLEC1Q9Y238 1755 aa13.37□□□□□ -0.27
HDLBP-219ENST00000442714 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
HDLBP-219ENST00000442714 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
HDLBP-219ENST00000442714 NTSR2O95665 410 aa13.36□□□□□ -0.27
HDLBP-219ENST00000442714 EIF2S2P20042 333 aaKnown RBP13.36□□□□□ -0.27
HDLBP-219ENST00000442714 PROSER3Q2NL68 480 aa13.36□□□□□ -0.27
HDLBP-219ENST00000442714 GPC2Q8N158 579 aa13.36□□□□□ -0.27
HDLBP-219ENST00000442714 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
HDLBP-219ENST00000442714 WDR90Q96KV7 1748 aa13.36□□□□□ -0.27
HDLBP-219ENST00000442714 ABCC12Q96J65 1359 aa13.35□□□□□ -0.27
HDLBP-219ENST00000442714 SCN7AQ01118 1682 aa13.35□□□□□ -0.27
HDLBP-219ENST00000442714 CHL1O00533 1208 aa13.35□□□□□ -0.27
HDLBP-219ENST00000442714 EPHX2P34913 555 aa13.35□□□□□ -0.27
HDLBP-219ENST00000442714 PARP10Q53GL7 1025 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms