RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 ZNF831Q5JPB2 1677 aa9.61□□□□□ -0.87
RFX3-206ENST00000442560 GOLGB1Q14789 3259 aaKnown RBP9.6□□□□□ -0.87
RFX3-206ENST00000442560 U2SURPO15042 1029 aaKnown RBP9.6□□□□□ -0.87
RFX3-206ENST00000442560 CANXP27824 592 aaKnown RBP9.6□□□□□ -0.87
RFX3-206ENST00000442560 NFIXQ14938 502 aa9.6□□□□□ -0.87
RFX3-206ENST00000442560 IFFO2Q5TF58 517 aa9.6□□□□□ -0.87
RFX3-206ENST00000442560 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
RFX3-206ENST00000442560 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
RFX3-206ENST00000442560 RNF181Q9P0P0 153 aa9.6□□□□□ -0.87
RFX3-206ENST00000442560 COL5A3P25940 1745 aaPredicted RBP9.59□□□□□ -0.87
RFX3-206ENST00000442560 KIAA1551Q9HCM1 1747 aa9.59□□□□□ -0.87
RFX3-206ENST00000442560 SNPHO15079 494 aa9.59□□□□□ -0.87
RFX3-206ENST00000442560 SERPINB2P05120 415 aa9.59□□□□□ -0.87
RFX3-206ENST00000442560 EMP3P54852 163 aa9.59□□□□□ -0.87
RFX3-206ENST00000442560 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
RFX3-206ENST00000442560 VSIG10Q8N0Z9 540 aa9.59□□□□□ -0.87
RFX3-206ENST00000442560 N4BP2Q86UW6 1770 aaPredicted RBP9.59□□□□□ -0.87
RFX3-206ENST00000442560 COL15A1P39059 1388 aa9.59□□□□□ -0.87
RFX3-206ENST00000442560 APLP1P51693 650 aa9.58□□□□□ -0.88
RFX3-206ENST00000442560 RASSF7Q02833 373 aa9.58□□□□□ -0.88
RFX3-206ENST00000442560 TEFQ10587 303 aa9.58□□□□□ -0.88
RFX3-206ENST00000442560 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
RFX3-206ENST00000442560 C3orf67Q6ZVT6 689 aa9.58□□□□□ -0.88
RFX3-206ENST00000442560 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
RFX3-206ENST00000442560 IL17REQ8NFR9 667 aa9.58□□□□□ -0.88
RFX3-206ENST00000442560 RRAGCQ9HB90 399 aa9.58□□□□□ -0.88
RFX3-206ENST00000442560 KCPQ6ZWJ8 1503 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 TJP1Q07157 1748 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 KIF13BQ9NQT8 1826 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 POTEB3A0JP26 581 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 STARD3NLO95772 234 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 GOLGA2Q08379 1002 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 POTEBQ6S5H4 581 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 C2CD5Q86YS7 1000 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 ZNF496Q96IT1 587 aaPredicted RBP9.57□□□□□ -0.88
RFX3-206ENST00000442560 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
RFX3-206ENST00000442560 MRC1P22897 1456 aa9.57□□□□□ -0.88
RFX3-206ENST00000442560 MYH14Q7Z406 1995 aaKnown RBP9.57□□□□□ -0.88
RFX3-206ENST00000442560 KDM2BQ8NHM5 1336 aa9.56□□□□□ -0.88
RFX3-206ENST00000442560 FAM205CA6NFA0 338 aa9.56□□□□□ -0.88
RFX3-206ENST00000442560 GNAT3A8MTJ3 354 aa9.56□□□□□ -0.88
RFX3-206ENST00000442560 EIF5P55010 431 aaKnown RBP9.56□□□□□ -0.88
RFX3-206ENST00000442560 HTRA3P83110 453 aa9.56□□□□□ -0.88
RFX3-206ENST00000442560 ZNF790Q6PG37 636 aa9.56□□□□□ -0.88
RFX3-206ENST00000442560 CCDC24Q8N4L8 307 aa9.56□□□□□ -0.88
RFX3-206ENST00000442560 PDCD7Q8N8D1 485 aaKnown RBP9.56□□□□□ -0.88
RFX3-206ENST00000442560 RBM46Q8TBY0 533 aaKnown RBP9.56□□□□□ -0.88
RFX3-206ENST00000442560 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
RFX3-206ENST00000442560 HEG1Q9ULI3 1381 aa9.55□□□□□ -0.88
RFX3-206ENST00000442560 A0A087WZG4 1122 aa9.55□□□□□ -0.88
RFX3-206ENST00000442560 H0YIN7 160 aa9.55□□□□□ -0.88
RFX3-206ENST00000442560 PRELPP51888 382 aa9.55□□□□□ -0.88
RFX3-206ENST00000442560 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
RFX3-206ENST00000442560 DNAJC5GQ8N7S2 189 aa9.55□□□□□ -0.88
RFX3-206ENST00000442560 TTLL6Q8N841 843 aa9.55□□□□□ -0.88
RFX3-206ENST00000442560 TEX13AQ9BXU3 409 aaPredicted RBP9.55□□□□□ -0.88
RFX3-206ENST00000442560 CARMIL3Q8ND23 1372 aa9.54□□□□□ -0.88
RFX3-206ENST00000442560 KCNQ3O43525 872 aa9.54□□□□□ -0.88
RFX3-206ENST00000442560 A1BGP04217 495 aa9.54□□□□□ -0.88
RFX3-206ENST00000442560 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
RFX3-206ENST00000442560 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
RFX3-206ENST00000442560 ZNF622Q969S3 477 aaKnown RBP eCLIP9.54□□□□□ -0.88
RFX3-206ENST00000442560 PHACTR3Q96KR7 559 aa9.54□□□□□ -0.88
RFX3-206ENST00000442560 ADAMTS7Q9UKP4 1686 aa9.54□□□□□ -0.88
RFX3-206ENST00000442560 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
RFX3-206ENST00000442560 NPC1L1Q9UHC9 1359 aa9.53□□□□□ -0.88
RFX3-206ENST00000442560 SCN11AQ9UI33 1791 aa9.53□□□□□ -0.88
RFX3-206ENST00000442560 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
RFX3-206ENST00000442560 LMNB1P20700 586 aa9.53□□□□□ -0.88
RFX3-206ENST00000442560 IL6STP40189 918 aaPredicted RBP9.53□□□□□ -0.88
RFX3-206ENST00000442560 FSTL1Q12841 308 aa9.53□□□□□ -0.88
RFX3-206ENST00000442560 PRR5LQ6MZQ0 368 aa9.53□□□□□ -0.88
RFX3-206ENST00000442560 NPM2Q86SE8 214 aaKnown RBP9.53□□□□□ -0.88
RFX3-206ENST00000442560 FMNL2Q96PY5 1086 aa9.53□□□□□ -0.88
RFX3-206ENST00000442560 GLTPD2A6NH11 291 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 NFKBIEO00221 500 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 C21orf2O43822 256 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 PDE6BP35913 854 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 PIP4K2AP48426 406 aaPredicted RBP9.52□□□□□ -0.89
RFX3-206ENST00000442560 CFAP53Q96M91 514 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 HS3ST6Q96QI5 342 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 BRIP1Q9BX63 1249 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 USP16Q9Y5T5 823 aa9.52□□□□□ -0.89
RFX3-206ENST00000442560 PRAMEF22A3QJZ6 481 aa9.51□□□□□ -0.89
RFX3-206ENST00000442560 NPHP1O15259 732 aa9.51□□□□□ -0.89
RFX3-206ENST00000442560 CAMTA2O94983 1202 aa9.51□□□□□ -0.89
RFX3-206ENST00000442560 DPY19L2Q6NUT2 758 aa9.51□□□□□ -0.89
RFX3-206ENST00000442560 DZIP3Q86Y13 1208 aaKnown RBP9.51□□□□□ -0.89
RFX3-206ENST00000442560 SMC1BQ8NDV3 1235 aa9.51□□□□□ -0.89
RFX3-206ENST00000442560 KLRG1Q96E93 195 aa9.51□□□□□ -0.89
RFX3-206ENST00000442560 SETDB2Q96T68 719 aa9.51□□□□□ -0.89
RFX3-206ENST00000442560 NUDCQ9Y266 331 aa9.51□□□□□ -0.89
RFX3-206ENST00000442560 ZC3H4Q9UPT8 1303 aaKnown RBP9.51□□□□□ -0.89
RFX3-206ENST00000442560 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
RFX3-206ENST00000442560 U2AF1L5P0DN76 240 aaPredicted RBP9.5□□□□□ -0.89
RFX3-206ENST00000442560 VEGFAP15692 232 aaPredicted RBP9.5□□□□□ -0.89
RFX3-206ENST00000442560 U2AF1Q01081 240 aaKnown RBP eCLIP9.5□□□□□ -0.89
RFX3-206ENST00000442560 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms