RNA–Protein interactions for RNA: ENST00000442533.1

UBE2DNL-201, Transcript of ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene), humanhuman

TSL 2

Gene UBE2DNL, Length 465 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2DNL-201ENST00000442533 SRGNP10124 158 aa23.54■■□□□ 1.36
UBE2DNL-201ENST00000442533 GAS2L2Q8NHY3 880 aa23.54■■□□□ 1.36
UBE2DNL-201ENST00000442533 FMNL2Q96PY5 1086 aa23.54■■□□□ 1.36
UBE2DNL-201ENST00000442533 COL3A1P02461 1466 aaPredicted RBP23.54■■□□□ 1.36
UBE2DNL-201ENST00000442533 MASTLQ96GX5 879 aa23.53■■□□□ 1.36
UBE2DNL-201ENST00000442533 A1BGP04217 495 aa23.52■■□□□ 1.36
UBE2DNL-201ENST00000442533 KIF7Q2M1P5 1343 aa23.52■■□□□ 1.36
UBE2DNL-201ENST00000442533 CNTNAP1P78357 1384 aa23.52■■□□□ 1.36
UBE2DNL-201ENST00000442533 IQCA1LA6NCM1 817 aa23.51■■□□□ 1.35
UBE2DNL-201ENST00000442533 CC2D1BQ5T0F9 858 aaKnown RBP23.51■■□□□ 1.35
UBE2DNL-201ENST00000442533 U2SURPO15042 1029 aaKnown RBP23.5■■□□□ 1.35
UBE2DNL-201ENST00000442533 LDHDQ86WU2 507 aa23.5■■□□□ 1.35
UBE2DNL-201ENST00000442533 DZIP3Q86Y13 1208 aaKnown RBP23.5■■□□□ 1.35
UBE2DNL-201ENST00000442533 PASKQ96RG2 1323 aa23.5■■□□□ 1.35
UBE2DNL-201ENST00000442533 L3MBTL3Q96JM7 780 aaPredicted RBP23.49■■□□□ 1.35
UBE2DNL-201ENST00000442533 CEMIPQ8WUJ3 1361 aa23.49■■□□□ 1.35
UBE2DNL-201ENST00000442533 FOXN1O15353 648 aa23.48■■□□□ 1.35
UBE2DNL-201ENST00000442533 PER1O15534 1290 aaPredicted RBP23.48■■□□□ 1.35
UBE2DNL-201ENST00000442533 CCDC93Q567U6 631 aa23.48■■□□□ 1.35
UBE2DNL-201ENST00000442533 TAF1DQ9H5J8 278 aaPredicted RBP23.48■■□□□ 1.35
UBE2DNL-201ENST00000442533 BTBD11A6QL63 1104 aa23.46■■□□□ 1.35
UBE2DNL-201ENST00000442533 KCNQ3O43525 872 aa23.46■■□□□ 1.35
UBE2DNL-201ENST00000442533 NBPF5PQ86XG9 351 aaPredicted RBP23.46■■□□□ 1.35
UBE2DNL-201ENST00000442533 C7orf43Q8WVR3 580 aa23.46■■□□□ 1.35
UBE2DNL-201ENST00000442533 PRDM10Q9NQV6 1147 aa23.45■■□□□ 1.34
UBE2DNL-201ENST00000442533 TMEM88BA6NKF7 163 aa23.44■■□□□ 1.34
UBE2DNL-201ENST00000442533 NPR1P16066 1061 aa23.44■■□□□ 1.34
UBE2DNL-201ENST00000442533 FKBP4Q02790 459 aaKnown RBP eCLIP23.44■■□□□ 1.34
UBE2DNL-201ENST00000442533 CLEC4GQ6UXB4 293 aa23.44■■□□□ 1.34
UBE2DNL-201ENST00000442533 AIDAQ96BJ3 306 aa23.44■■□□□ 1.34
UBE2DNL-201ENST00000442533 ADAMTSL1Q8N6G6 1762 aa23.43■■□□□ 1.34
UBE2DNL-201ENST00000442533 ZNF541Q9H0D2 1346 aa23.43■■□□□ 1.34
UBE2DNL-201ENST00000442533 PIP4K2AP48426 406 aaPredicted RBP23.43■■□□□ 1.34
UBE2DNL-201ENST00000442533 EAPPQ56P03 285 aaPredicted RBP23.43■■□□□ 1.34
UBE2DNL-201ENST00000442533 ZNF652Q9Y2D9 606 aa23.43■■□□□ 1.34
UBE2DNL-201ENST00000442533 USP16Q9Y5T5 823 aa23.43■■□□□ 1.34
UBE2DNL-201ENST00000442533 CTCFP49711 727 aaPredicted RBP23.42■■□□□ 1.34
UBE2DNL-201ENST00000442533 VEGFBP49765 207 aa23.42■■□□□ 1.34
UBE2DNL-201ENST00000442533 ZNF277Q9NRM2 450 aaPredicted RBP23.42■■□□□ 1.34
UBE2DNL-201ENST00000442533 NPC1L1Q9UHC9 1359 aa23.41■■□□□ 1.34
UBE2DNL-201ENST00000442533 KLRG2A4D1S0 409 aaPredicted RBP23.41■■□□□ 1.34
UBE2DNL-201ENST00000442533 ITGBL1O95965 494 aaPredicted RBP23.41■■□□□ 1.34
UBE2DNL-201ENST00000442533 HACL1Q9UJ83 578 aa23.41■■□□□ 1.34
UBE2DNL-201ENST00000442533 PHACTR3Q96KR7 559 aa23.4■■□□□ 1.34
UBE2DNL-201ENST00000442533 PRAMEF22A3QJZ6 481 aa23.39■■□□□ 1.33
UBE2DNL-201ENST00000442533 TPTE2Q6XPS3 522 aa23.39■■□□□ 1.33
UBE2DNL-201ENST00000442533 RTKN2Q8IZC4 609 aa23.39■■□□□ 1.33
UBE2DNL-201ENST00000442533 CLEC11AQ9Y240 323 aa23.39■■□□□ 1.33
UBE2DNL-201ENST00000442533 SNRPA1P09661 255 aaKnown RBP23.38■■□□□ 1.33
UBE2DNL-201ENST00000442533 PRKAR2BP31323 418 aa23.38■■□□□ 1.33
UBE2DNL-201ENST00000442533 EPHX2P34913 555 aa23.38■■□□□ 1.33
UBE2DNL-201ENST00000442533 CNGB1Q14028 1251 aaPredicted RBP23.38■■□□□ 1.33
UBE2DNL-201ENST00000442533 OLFM4Q6UX06 510 aa23.38■■□□□ 1.33
UBE2DNL-201ENST00000442533 NIP7Q9Y221 180 aaKnown RBP eCLIP23.38■■□□□ 1.33
UBE2DNL-201ENST00000442533 RSPH6AQ9H0K4 717 aa23.37■■□□□ 1.33
UBE2DNL-201ENST00000442533 WBP1LQ9NX94 342 aa23.37■■□□□ 1.33
UBE2DNL-201ENST00000442533 RNF123Q5XPI4 1314 aa23.36■■□□□ 1.33
UBE2DNL-201ENST00000442533 RGL2O15211 777 aa23.36■■□□□ 1.33
UBE2DNL-201ENST00000442533 IARSP41252 1262 aaKnown RBP23.36■■□□□ 1.33
UBE2DNL-201ENST00000442533 PNMA8AQ86V59 439 aaPredicted RBP23.36■■□□□ 1.33
UBE2DNL-201ENST00000442533 FZD9O00144 591 aa23.35■■□□□ 1.33
UBE2DNL-201ENST00000442533 RASSF10A6NK89 507 aa23.34■■□□□ 1.33
UBE2DNL-201ENST00000442533 FAM177BA6PVY3 158 aa23.34■■□□□ 1.33
UBE2DNL-201ENST00000442533 ALDH1B1P30837 517 aa23.34■■□□□ 1.33
UBE2DNL-201ENST00000442533 LBX1P52954 281 aa23.34■■□□□ 1.33
UBE2DNL-201ENST00000442533 CNTROBQ8N137 903 aa23.34■■□□□ 1.33
UBE2DNL-201ENST00000442533 SYNE4Q8N205 404 aa23.34■■□□□ 1.33
UBE2DNL-201ENST00000442533 CCER1Q8TC90 406 aaPredicted RBP23.34■■□□□ 1.33
UBE2DNL-201ENST00000442533 NBPF26B4DH59 902 aa23.33■■□□□ 1.33
UBE2DNL-201ENST00000442533 MAP1SQ66K74 1059 aaPredicted RBP23.33■■□□□ 1.33
UBE2DNL-201ENST00000442533 NBPF10Q6P3W6 841 aaKnown RBP23.33■■□□□ 1.33
UBE2DNL-201ENST00000442533 GPC2Q8N158 579 aa23.33■■□□□ 1.33
UBE2DNL-201ENST00000442533 NBPF15Q8N660 670 aa23.33■■□□□ 1.33
UBE2DNL-201ENST00000442533 RTF1Q92541 710 aaKnown RBP23.33■■□□□ 1.33
UBE2DNL-201ENST00000442533 LAMB4A4D0S4 1761 aa23.32■■□□□ 1.32
UBE2DNL-201ENST00000442533 DEFB115Q30KQ5 88 aa23.32■■□□□ 1.32
UBE2DNL-201ENST00000442533 MCM10Q7L590 875 aa23.32■■□□□ 1.32
UBE2DNL-201ENST00000442533 CFAP53Q96M91 514 aa23.32■■□□□ 1.32
UBE2DNL-201ENST00000442533 SNED1Q8TER0 1413 aa23.32■■□□□ 1.32
UBE2DNL-201ENST00000442533 GTF2E1P29083 439 aaPredicted RBP23.31■■□□□ 1.32
UBE2DNL-201ENST00000442533 HLFQ16534 295 aa23.3■■□□□ 1.32
UBE2DNL-201ENST00000442533 JDP2Q8WYK2 163 aa23.3■■□□□ 1.32
UBE2DNL-201ENST00000442533 PSMD1Q99460 953 aa23.3■■□□□ 1.32
UBE2DNL-201ENST00000442533 WDR33Q9C0J8 1336 aaKnown RBP23.3■■□□□ 1.32
UBE2DNL-201ENST00000442533 HSPA8P11142 646 aaKnown RBP23.29■■□□□ 1.32
UBE2DNL-201ENST00000442533 ABT1Q9ULW3 272 aaKnown RBP23.29■■□□□ 1.32
UBE2DNL-201ENST00000442533 NUDCQ9Y266 331 aa23.29■■□□□ 1.32
UBE2DNL-201ENST00000442533 NUP98P52948 1817 aa23.29■■□□□ 1.32
UBE2DNL-201ENST00000442533 LTBP1Q14766 1721 aa23.28■■□□□ 1.32
UBE2DNL-201ENST00000442533 MAP2K1Q02750 393 aaPredicted RBP23.28■■□□□ 1.32
UBE2DNL-201ENST00000442533 COL4A5P29400 1685 aa23.28■■□□□ 1.32
UBE2DNL-201ENST00000442533 ABCC12Q96J65 1359 aa23.27■■□□□ 1.32
UBE2DNL-201ENST00000442533 THSD7BQ9C0I4 1608 aa23.27■■□□□ 1.32
UBE2DNL-201ENST00000442533 EIF6P56537 245 aaKnown RBP23.27■■□□□ 1.32
UBE2DNL-201ENST00000442533 DCTN1Q14203 1278 aa23.27■■□□□ 1.32
UBE2DNL-201ENST00000442533 CRY2Q49AN0 593 aa23.27■■□□□ 1.32
UBE2DNL-201ENST00000442533 U2AF1L5P0DN76 240 aaPredicted RBP23.26■■□□□ 1.31
UBE2DNL-201ENST00000442533 LMOD1P29536 600 aaPredicted RBP23.26■■□□□ 1.31
UBE2DNL-201ENST00000442533 U2AF1Q01081 240 aaKnown RBP eCLIP23.26■■□□□ 1.31
UBE2DNL-201ENST00000442533 CC2D2BQ6DHV5 1058 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms