RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 KIF1CO43896 1103 aaKnown RBP11.89□□□□□ -0.51
LIN54-202ENST00000442461 RLBP1P12271 317 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 LIG3P49916 1009 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 MICAL1Q8TDZ2 1067 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 COG3Q96JB2 828 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 SUDS3Q9H7L9 328 aaPredicted RBP11.89□□□□□ -0.51
LIN54-202ENST00000442461 NCOA2Q15596 1464 aa11.88□□□□□ -0.51
LIN54-202ENST00000442461 RAD51AP2Q09MP3 1159 aa11.88□□□□□ -0.51
LIN54-202ENST00000442461 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
LIN54-202ENST00000442461 KIF4AO95239 1232 aa11.88□□□□□ -0.51
LIN54-202ENST00000442461 HMGB1P09429 215 aaKnown RBP11.88□□□□□ -0.51
LIN54-202ENST00000442461 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
LIN54-202ENST00000442461 IL1RAPL2Q9NP60 686 aa11.88□□□□□ -0.51
LIN54-202ENST00000442461 A0A087WUV0 522 aaPredicted RBP11.88□□□□□ -0.51
LIN54-202ENST00000442461 SDSP20132 328 aa11.88□□□□□ -0.51
LIN54-202ENST00000442461 NEDD9Q14511 834 aa11.88□□□□□ -0.51
LIN54-202ENST00000442461 GPR161Q8N6U8 529 aaKnown RBP11.88□□□□□ -0.51
LIN54-202ENST00000442461 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
LIN54-202ENST00000442461 SLC4A2P04920 1241 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 TMPOP42166 694 aaKnown RBP11.87□□□□□ -0.51
LIN54-202ENST00000442461 CCDC6Q16204 474 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 NUP88Q99567 741 aaPredicted RBP11.87□□□□□ -0.51
LIN54-202ENST00000442461 SIL1Q9H173 461 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 SWAP70Q9UH65 585 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 CAPN7Q9Y6W3 813 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 MAGEA9P43362 315 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 ZSCAN25Q6NSZ9 544 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 MPHOSPH8Q99549 860 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 JADE2Q9NQC1 790 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 ANKRD50Q9ULJ7 1429 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 PEX19P40855 299 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 AMPHP49418 695 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 MMS22LQ6ZRQ5 1243 aa11.87□□□□□ -0.51
LIN54-202ENST00000442461 ZSCAN16Q9H4T2 348 aaPredicted RBP11.87□□□□□ -0.51
LIN54-202ENST00000442461 BUB1BO60566 1050 aaPredicted RBP11.86□□□□□ -0.51
LIN54-202ENST00000442461 CHMP4BP1P59074 171 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 CPLX4Q7Z7G2 160 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 TMX4Q9H1E5 349 aaPredicted RBP11.86□□□□□ -0.51
LIN54-202ENST00000442461 GOLGA6CA6NDK9 693 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 GCOM1H8Y6P7 765 aaPredicted RBP11.86□□□□□ -0.51
LIN54-202ENST00000442461 MYZAPP0CAP1 466 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 GOLGA6DP0CG33 693 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 BRD3Q15059 726 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 KLHL10Q6JEL2 608 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 UTP14AQ9BVJ6 771 aaKnown RBP11.86□□□□□ -0.51
LIN54-202ENST00000442461 GOLGA6AQ9NYA3 693 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 PYCARDQ9ULZ3 195 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 EXOC4Q96A65 974 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.518e-6■□□□□ 9.7
LIN54-202ENST00000442461 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 LMNTD2Q8IXW0 634 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 FBF1Q8TES7 1133 aa11.86□□□□□ -0.51
LIN54-202ENST00000442461 FYCO1Q9BQS8 1478 aa11.85□□□□□ -0.51
LIN54-202ENST00000442461 LMOD1P29536 600 aaPredicted RBP11.85□□□□□ -0.51
LIN54-202ENST00000442461 TUBB2AQ13885 445 aa11.85□□□□□ -0.51
LIN54-202ENST00000442461 TUBB2BQ9BVA1 445 aa11.85□□□□□ -0.51
LIN54-202ENST00000442461 NSRP1Q9H0G5 558 aaKnown RBP11.85□□□□□ -0.51
LIN54-202ENST00000442461 DDX58O95786 925 aaKnown RBP11.85□□□□□ -0.51
LIN54-202ENST00000442461 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
LIN54-202ENST00000442461 CASKIN1Q8WXD9 1431 aa11.85□□□□□ -0.51
LIN54-202ENST00000442461 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
LIN54-202ENST00000442461 ZNF644Q9H582 1327 aaPredicted RBP11.85□□□□□ -0.51
LIN54-202ENST00000442461 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
LIN54-202ENST00000442461 KARSQ15046 597 aaKnown RBP11.85□□□□□ -0.51
LIN54-202ENST00000442461 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
LIN54-202ENST00000442461 DDX54Q8TDD1 881 aaKnown RBP11.85□□□□□ -0.51
LIN54-202ENST00000442461 USP16Q9Y5T5 823 aa11.85□□□□□ -0.51
LIN54-202ENST00000442461 KIF3BO15066 747 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 LRMPQ12912 555 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 CNNM3Q8NE01 707 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 CBX8Q9HC52 389 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 SPATA24Q86W54 205 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 ALS2CR12Q96Q35 445 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 USP26Q9BXU7 913 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 LACTBP83111 547 aaPredicted RBP11.84□□□□□ -0.51
LIN54-202ENST00000442461 NCBP1Q09161 790 aaKnown RBP11.84□□□□□ -0.51
LIN54-202ENST00000442461 TEFQ10587 303 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
LIN54-202ENST00000442461 EFCAB8A8MWE9 144 aa11.83□□□□□ -0.51
LIN54-202ENST00000442461 SART3Q15020 963 aaKnown RBP11.83□□□□□ -0.51
LIN54-202ENST00000442461 ZNF569Q5MCW4 686 aa11.83□□□□□ -0.51
LIN54-202ENST00000442461 ABCC11Q96J66 1382 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 CDKL5O76039 1030 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 FBXO18Q8NFZ0 1043 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 LZTFL1Q9NQ48 299 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 TMEM51Q9NW97 253 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 IMPACTQ9P2X3 320 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 ANKRD62A6NC57 917 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 PCK1P35558 622 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 EFCAB2Q5VUJ9 269 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 ISM2Q6H9L7 571 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 GGT6Q6P531 493 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
LIN54-202ENST00000442461 CTNNA3Q9UI47 895 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms