RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
SYN3-204ENST00000441821 NPHP1O15259 732 aa13.57□□□□□ -0.24
SYN3-204ENST00000441821 CAMTA2O94983 1202 aa13.57□□□□□ -0.24
SYN3-204ENST00000441821 DEFB115Q30KQ5 88 aa13.57□□□□□ -0.24
SYN3-204ENST00000441821 CCDC93Q567U6 631 aa13.57□□□□□ -0.24
SYN3-204ENST00000441821 ZNF790Q6PG37 636 aa13.57□□□□□ -0.24
SYN3-204ENST00000441821 ABHD8Q96I13 439 aa13.57□□□□□ -0.24
SYN3-204ENST00000441821 HACL1Q9UJ83 578 aa13.57□□□□□ -0.24
SYN3-204ENST00000441821 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
SYN3-204ENST00000441821 KNSTRNQ9Y448 316 aa13.57□□□□□ -0.24
SYN3-204ENST00000441821 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
SYN3-204ENST00000441821 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
SYN3-204ENST00000441821 MAP2K1Q02750 393 aaPredicted RBP13.56□□□□□ -0.24
SYN3-204ENST00000441821 EAPPQ56P03 285 aaPredicted RBP13.56□□□□□ -0.24
SYN3-204ENST00000441821 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
SYN3-204ENST00000441821 PNMA8AQ86V59 439 aaPredicted RBP13.56□□□□□ -0.24
SYN3-204ENST00000441821 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
SYN3-204ENST00000441821 CACNA1SQ13698 1873 aa13.56□□□□□ -0.24
SYN3-204ENST00000441821 EPHX2P34913 555 aa13.55□□□□□ -0.24
SYN3-204ENST00000441821 EIF4G2P78344 907 aaKnown RBP eCLIP13.55□□□□□ -0.24
SYN3-204ENST00000441821 FKBP4Q02790 459 aaKnown RBP eCLIP13.55□□□□□ -0.24
SYN3-204ENST00000441821 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
SYN3-204ENST00000441821 CNTROBQ8N137 903 aa13.55□□□□□ -0.24
SYN3-204ENST00000441821 WDR33Q9C0J8 1336 aaKnown RBP13.55□□□□□ -0.24
SYN3-204ENST00000441821 ZNF541Q9H0D2 1346 aa13.55□□□□□ -0.24
SYN3-204ENST00000441821 KLRG2A4D1S0 409 aaPredicted RBP13.54□□□□□ -0.24
SYN3-204ENST00000441821 A1BGP04217 495 aa13.54□□□□□ -0.24
SYN3-204ENST00000441821 NPR1P16066 1061 aa13.54□□□□□ -0.24
SYN3-204ENST00000441821 TEFQ10587 303 aa13.54□□□□□ -0.24
SYN3-204ENST00000441821 AMER1Q5JTC6 1135 aaPredicted RBP13.54□□□□□ -0.24
SYN3-204ENST00000441821 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
SYN3-204ENST00000441821 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
SYN3-204ENST00000441821 ZNF277Q9NRM2 450 aaPredicted RBP13.54□□□□□ -0.24
SYN3-204ENST00000441821 FZD9O00144 591 aa13.53□□□□□ -0.24
SYN3-204ENST00000441821 DIAPH1O60610 1272 aaKnown RBP13.53□□□□□ -0.24
SYN3-204ENST00000441821 HSPA5P11021 654 aaKnown RBP13.53□□□□□ -0.24
SYN3-204ENST00000441821 TRIM26Q12899 539 aaPredicted RBP13.53□□□□□ -0.24
SYN3-204ENST00000441821 MAP1SQ66K74 1059 aaPredicted RBP13.53□□□□□ -0.24
SYN3-204ENST00000441821 CLEC4GQ6UXB4 293 aa13.53□□□□□ -0.24
SYN3-204ENST00000441821 DZIP3Q86Y13 1208 aaKnown RBP13.53□□□□□ -0.24
SYN3-204ENST00000441821 IL17REQ8NFR9 667 aa13.53□□□□□ -0.24
SYN3-204ENST00000441821 BCORQ6W2J9 1755 aa13.53□□□□□ -0.24
SYN3-204ENST00000441821 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
SYN3-204ENST00000441821 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.25
SYN3-204ENST00000441821 GPC2Q8N158 579 aa13.52□□□□□ -0.25
SYN3-204ENST00000441821 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
SYN3-204ENST00000441821 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
SYN3-204ENST00000441821 RGS19P49795 217 aa13.51□□□□□ -0.25
SYN3-204ENST00000441821 ABT1Q9ULW3 272 aaKnown RBP13.51□□□□□ -0.25
SYN3-204ENST00000441821 TNRC18O15417 2968 aaPredicted RBP13.5□□□□□ -0.25
SYN3-204ENST00000441821 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
SYN3-204ENST00000441821 MLLT1Q03111 559 aaPredicted RBP13.5□□□□□ -0.25
SYN3-204ENST00000441821 OLFM4Q6UX06 510 aa13.5□□□□□ -0.25
SYN3-204ENST00000441821 TPTE2Q6XPS3 522 aa13.5□□□□□ -0.25
SYN3-204ENST00000441821 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
SYN3-204ENST00000441821 GAS2L2Q8NHY3 880 aa13.5□□□□□ -0.25
SYN3-204ENST00000441821 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
SYN3-204ENST00000441821 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
SYN3-204ENST00000441821 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
SYN3-204ENST00000441821 RGL2O15211 777 aa13.49□□□□□ -0.25
SYN3-204ENST00000441821 ALDH1B1P30837 517 aa13.49□□□□□ -0.25
SYN3-204ENST00000441821 BEGAINQ9BUH8 593 aa13.49□□□□□ -0.25
SYN3-204ENST00000441821 USP16Q9Y5T5 823 aa13.49□□□□□ -0.25
SYN3-204ENST00000441821 THSD7BQ9C0I4 1608 aa13.49□□□□□ -0.25
SYN3-204ENST00000441821 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
SYN3-204ENST00000441821 CCDC85CA6NKD9 419 aa13.48□□□□□ -0.25
SYN3-204ENST00000441821 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
SYN3-204ENST00000441821 ECE1P42892 770 aa13.48□□□□□ -0.25
SYN3-204ENST00000441821 CAPNS2Q96L46 248 aa13.48□□□□□ -0.25
SYN3-204ENST00000441821 PSMD1Q99460 953 aa13.48□□□□□ -0.25
SYN3-204ENST00000441821 KCNQ3O43525 872 aa13.47□□□□□ -0.25
SYN3-204ENST00000441821 JDP2Q8WYK2 163 aa13.47□□□□□ -0.25
SYN3-204ENST00000441821 GPR101Q96P66 508 aaPredicted RBP13.47□□□□□ -0.25
SYN3-204ENST00000441821 NIP7Q9Y221 180 aaKnown RBP eCLIP13.47□□□□□ -0.25
SYN3-204ENST00000441821 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
SYN3-204ENST00000441821 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.25
SYN3-204ENST00000441821 LMOD1P29536 600 aaPredicted RBP13.46□□□□□ -0.25
SYN3-204ENST00000441821 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
SYN3-204ENST00000441821 EIF6P56537 245 aaKnown RBP13.45□□□□□ -0.26
SYN3-204ENST00000441821 CST9Q5W186 159 aa13.45□□□□□ -0.26
SYN3-204ENST00000441821 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
SYN3-204ENST00000441821 CYP4F22Q6NT55 531 aa13.45□□□□□ -0.26
SYN3-204ENST00000441821 GJA3Q9Y6H8 435 aa13.45□□□□□ -0.26
SYN3-204ENST00000441821 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
SYN3-204ENST00000441821 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
SYN3-204ENST00000441821 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
SYN3-204ENST00000441821 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
SYN3-204ENST00000441821 MAP2K2P36507 400 aa13.44□□□□□ -0.26
SYN3-204ENST00000441821 SCNN1DP51172 638 aa13.44□□□□□ -0.26
SYN3-204ENST00000441821 FMR1Q06787 632 aaKnown RBP eCLIP13.44□□□□□ -0.26
SYN3-204ENST00000441821 PAXIP1Q6ZW49 1069 aaPredicted RBP13.44□□□□□ -0.26
SYN3-204ENST00000441821 USP50Q70EL3 339 aaPredicted RBP13.44□□□□□ -0.26
SYN3-204ENST00000441821 TLL2Q9Y6L7 1015 aa13.44□□□□□ -0.26
SYN3-204ENST00000441821 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
SYN3-204ENST00000441821 FAM177BA6PVY3 158 aa13.43□□□□□ -0.26
SYN3-204ENST00000441821 PER1O15534 1290 aaPredicted RBP13.43□□□□□ -0.26
SYN3-204ENST00000441821 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
SYN3-204ENST00000441821 EPS15P42566 896 aa13.43□□□□□ -0.26
SYN3-204ENST00000441821 CRY2Q49AN0 593 aa13.43□□□□□ -0.26
SYN3-204ENST00000441821 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms