RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
CPSF4-206ENST00000441580 SURF6O75683 361 aaKnown RBP16.21■□□□□ 0.19
CPSF4-206ENST00000441580 IGKV5-2P06315 115 aa16.21■□□□□ 0.19
CPSF4-206ENST00000441580 MYD88Q99836 296 aa16.21■□□□□ 0.19
CPSF4-206ENST00000441580 AK9Q5TCS8 1911 aa16.21■□□□□ 0.19
CPSF4-206ENST00000441580 SPATA31A1Q5TZJ5 1347 aa16.2■□□□□ 0.18
CPSF4-206ENST00000441580 GCKRQ14397 625 aa16.2■□□□□ 0.18
CPSF4-206ENST00000441580 RHPN1Q8TCX5 695 aa16.2■□□□□ 0.18
CPSF4-206ENST00000441580 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
CPSF4-206ENST00000441580 SDSP20132 328 aa16.19■□□□□ 0.18
CPSF4-206ENST00000441580 OS9Q13438 667 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-206ENST00000441580 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-206ENST00000441580 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
CPSF4-206ENST00000441580 ANKRD36CQ5JPF3 1778 aa16.18■□□□□ 0.18
CPSF4-206ENST00000441580 JCADQ9P266 1359 aa16.18■□□□□ 0.18
CPSF4-206ENST00000441580 EXOC5O00471 708 aa16.18■□□□□ 0.18
CPSF4-206ENST00000441580 REC8O95072 547 aa16.18■□□□□ 0.18
CPSF4-206ENST00000441580 GPATCH3Q96I76 525 aa16.18■□□□□ 0.18
CPSF4-206ENST00000441580 TTC41PQ6P2S7 1318 aa16.18■□□□□ 0.18
CPSF4-206ENST00000441580 RREB1Q92766 1687 aa16.18■□□□□ 0.18
CPSF4-206ENST00000441580 BICC1Q9H694 974 aaKnown RBP16.17■□□□□ 0.18
CPSF4-206ENST00000441580 SPATA31A5Q5VU36 1347 aa16.17■□□□□ 0.18
CPSF4-206ENST00000441580 SPATA31A7Q8IWB4 1347 aa16.17■□□□□ 0.18
CPSF4-206ENST00000441580 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
CPSF4-206ENST00000441580 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
CPSF4-206ENST00000441580 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
CPSF4-206ENST00000441580 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
CPSF4-206ENST00000441580 BARGINQ6ZT62 677 aa16.16■□□□□ 0.18
CPSF4-206ENST00000441580 HSCBQ8IWL3 235 aa16.16■□□□□ 0.18
CPSF4-206ENST00000441580 NBPF15Q8N660 670 aa16.16■□□□□ 0.18
CPSF4-206ENST00000441580 PIGBQ92521 554 aa16.16■□□□□ 0.18
CPSF4-206ENST00000441580 ZNF831Q5JPB2 1677 aa16.15■□□□□ 0.18
CPSF4-206ENST00000441580 ADAMTS2O95450 1211 aa16.15■□□□□ 0.18
CPSF4-206ENST00000441580 STARD3NLO95772 234 aa16.15■□□□□ 0.18
CPSF4-206ENST00000441580 CLASRPQ8N2M8 674 aaKnown RBP16.15■□□□□ 0.18
CPSF4-206ENST00000441580 ERC2O15083 957 aa16.14■□□□□ 0.17
CPSF4-206ENST00000441580 DDB1Q16531 1140 aa16.14■□□□□ 0.17
CPSF4-206ENST00000441580 RABL6Q3YEC7 729 aaPredicted RBP16.14■□□□□ 0.17
CPSF4-206ENST00000441580 ATG3Q9NT62 314 aa16.14■□□□□ 0.17
CPSF4-206ENST00000441580 CWC25Q9NXE8 425 aaPredicted RBP16.14■□□□□ 0.17
CPSF4-206ENST00000441580 PIP4K2AP48426 406 aaPredicted RBP16.13■□□□□ 0.17
CPSF4-206ENST00000441580 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 MYT1Q01538 1121 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 CCDC191Q8NCU4 936 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 SNX21Q969T3 373 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 KAZALD1Q96I82 304 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 TBC1D2Q9BYX2 928 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
CPSF4-206ENST00000441580 UBAP1LF5GYI3 381 aa16.12■□□□□ 0.17
CPSF4-206ENST00000441580 EPB41L2O43491 1005 aaKnown RBP16.12■□□□□ 0.17
CPSF4-206ENST00000441580 GLRX3O76003 335 aaKnown RBP16.12■□□□□ 0.17
CPSF4-206ENST00000441580 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.17
CPSF4-206ENST00000441580 UBE3BQ7Z3V4 1068 aa16.12■□□□□ 0.17
CPSF4-206ENST00000441580 A0A087WZG4 1122 aa16.11■□□□□ 0.17
CPSF4-206ENST00000441580 A1BGP04217 495 aa16.11■□□□□ 0.17
CPSF4-206ENST00000441580 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
CPSF4-206ENST00000441580 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
CPSF4-206ENST00000441580 CNTROBQ8N137 903 aa16.11■□□□□ 0.17
CPSF4-206ENST00000441580 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
CPSF4-206ENST00000441580 ASAP1Q9ULH1 1129 aa16.11■□□□□ 0.17
CPSF4-206ENST00000441580 SPATA31A6Q5VVP1 1343 aa16.11■□□□□ 0.17
CPSF4-206ENST00000441580 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
CPSF4-206ENST00000441580 NUTM2BA6NNL0 878 aaPredicted RBP16.1■□□□□ 0.17
CPSF4-206ENST00000441580 NUTM2EB1AL46 878 aaPredicted RBP16.1■□□□□ 0.17
CPSF4-206ENST00000441580 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
CPSF4-206ENST00000441580 IFIT2P09913 472 aaKnown RBP16.1■□□□□ 0.17
CPSF4-206ENST00000441580 CASP7P55210 303 aa16.1■□□□□ 0.17
CPSF4-206ENST00000441580 RABEP1Q15276 862 aa16.1■□□□□ 0.17
CPSF4-206ENST00000441580 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
CPSF4-206ENST00000441580 TTLL7Q6ZT98 887 aa16.1■□□□□ 0.17
CPSF4-206ENST00000441580 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
CPSF4-206ENST00000441580 NUTM2AQ8IVF1 878 aaPredicted RBP16.1■□□□□ 0.17
CPSF4-206ENST00000441580 PI4K2BQ8TCG2 481 aa16.1■□□□□ 0.17
CPSF4-206ENST00000441580 MCCP23508 829 aa16.09■□□□□ 0.17
CPSF4-206ENST00000441580 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
CPSF4-206ENST00000441580 TSHZ3Q63HK5 1081 aa16.09■□□□□ 0.17
CPSF4-206ENST00000441580 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
CPSF4-206ENST00000441580 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
CPSF4-206ENST00000441580 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
CPSF4-206ENST00000441580 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
CPSF4-206ENST00000441580 ATP5J2-PTCD1G3V325 749 aa16.08■□□□□ 0.16
CPSF4-206ENST00000441580 H7C1W4 665 aa16.08■□□□□ 0.16
CPSF4-206ENST00000441580 IL27Q8NEV9 243 aa16.08■□□□□ 0.16
CPSF4-206ENST00000441580 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.16
CPSF4-206ENST00000441580 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.16
CPSF4-206ENST00000441580 ZBTB3Q9H5J0 574 aa16.08■□□□□ 0.16
CPSF4-206ENST00000441580 PA2G4Q9UQ80 394 aaKnown RBP16.08■□□□□ 0.16
CPSF4-206ENST00000441580 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.16
CPSF4-206ENST00000441580 CHMLP26374 656 aa16.07■□□□□ 0.16
CPSF4-206ENST00000441580 TRIM28Q13263 835 aaKnown RBP16.07■□□□□ 0.16
CPSF4-206ENST00000441580 VPS72Q15906 364 aa16.07■□□□□ 0.16
CPSF4-206ENST00000441580 AACSQ86V21 672 aa16.07■□□□□ 0.16
CPSF4-206ENST00000441580 RILPL2Q969X0 211 aa16.07■□□□□ 0.16
CPSF4-206ENST00000441580 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
CPSF4-206ENST00000441580 CCDC9Q9Y3X0 531 aaKnown RBP16.07■□□□□ 0.16
CPSF4-206ENST00000441580 RFX7Q2KHR2 1363 aa16.07■□□□□ 0.16
CPSF4-206ENST00000441580 BCL9LQ86UU0 1499 aa16.07■□□□□ 0.16
CPSF4-206ENST00000441580 NHSQ6T4R5 1651 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms