RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 KDRP35968 1356 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 SMTNL1A8MU46 457 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 TRIM6-TRIM34B2RNG4 842 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 LRMPQ12912 555 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 TRIM34Q9BYJ4 488 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.05■□□□□ 0.8
PMS1-213ENST00000441310 V9GYY5 206 aaPredicted RBP20.05■□□□□ 0.8
PMS1-213ENST00000441310 TPM3P06753 285 aa20.04■□□□□ 0.8
PMS1-213ENST00000441310 CCDC112Q8NEF3 446 aa20.04■□□□□ 0.8
PMS1-213ENST00000441310 TCHHQ07283 1943 aa20.04■□□□□ 0.8
PMS1-213ENST00000441310 ST7Q9NRC1 585 aa20.04■□□□□ 0.8
PMS1-213ENST00000441310 CUL4AQ13619 759 aa20.04■□□□□ 0.8
PMS1-213ENST00000441310 UPF3BQ9BZI7 483 aaKnown RBP20.04■□□□□ 0.8
PMS1-213ENST00000441310 SRCIN1Q9C0H9 1055 aa20.04■□□□□ 0.8
PMS1-213ENST00000441310 FIBPO43427 364 aa20.03■□□□□ 0.8
PMS1-213ENST00000441310 PALD1Q9ULE6 856 aa20.03■□□□□ 0.8
PMS1-213ENST00000441310 WDR33Q9C0J8 1336 aaKnown RBP20.03■□□□□ 0.8
PMS1-213ENST00000441310 LGR6Q9HBX8 967 aa20.02■□□□□ 0.8
PMS1-213ENST00000441310 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.8
PMS1-213ENST00000441310 DRC7Q8IY82 874 aa20.02■□□□□ 0.8
PMS1-213ENST00000441310 CALCOCO1Q9P1Z2 691 aa20.02■□□□□ 0.8
PMS1-213ENST00000441310 CCDC186Q7Z3E2 898 aa20.02■□□□□ 0.79
PMS1-213ENST00000441310 IP6K1Q92551 441 aa20.02■□□□□ 0.79
PMS1-213ENST00000441310 MCM2P49736 904 aa20.01■□□□□ 0.79
PMS1-213ENST00000441310 SYCP1Q15431 976 aa20.01■□□□□ 0.79
PMS1-213ENST00000441310 GCP02774 474 aa20.01■□□□□ 0.79
PMS1-213ENST00000441310 HAP1P54257 671 aaPredicted RBP20.01■□□□□ 0.79
PMS1-213ENST00000441310 ZC3H6P61129 1189 aaKnown RBP20.01■□□□□ 0.79
PMS1-213ENST00000441310 MSH6P52701 1360 aa20.01■□□□□ 0.79
PMS1-213ENST00000441310 FMN2Q9NZ56 1722 aa20.01■□□□□ 0.79
PMS1-213ENST00000441310 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
PMS1-213ENST00000441310 STK31Q9BXU1 1019 aa20■□□□□ 0.79
PMS1-213ENST00000441310 RGPD1P0DJD0 1748 aa20■□□□□ 0.79
PMS1-213ENST00000441310 KIAA0232Q92628 1395 aa20■□□□□ 0.79
PMS1-213ENST00000441310 KMT5BQ4FZB7 885 aa20■□□□□ 0.79
PMS1-213ENST00000441310 INTS4Q96HW7 963 aaKnown RBP19.99■□□□□ 0.79
PMS1-213ENST00000441310 ADGRL3Q9HAR2 1447 aa19.99■□□□□ 0.79
PMS1-213ENST00000441310 HSPA2P54652 639 aa19.98■□□□□ 0.79
PMS1-213ENST00000441310 UBE2HP62256 183 aa19.98■□□□□ 0.79
PMS1-213ENST00000441310 MPRIPQ6WCQ1 1025 aa19.98■□□□□ 0.79
PMS1-213ENST00000441310 NRBP1Q9UHY1 535 aa19.98■□□□□ 0.79
PMS1-213ENST00000441310 CHD2O14647 1828 aaKnown RBP19.98■□□□□ 0.79
PMS1-213ENST00000441310 TPD52L1Q16890 204 aaPredicted RBP19.98■□□□□ 0.79
PMS1-213ENST00000441310 KRT28Q7Z3Y7 464 aa19.98■□□□□ 0.79
PMS1-213ENST00000441310 FUCA2Q9BTY2 467 aa19.98■□□□□ 0.79
PMS1-213ENST00000441310 TAF7Q15545 349 aaPredicted RBP19.98■□□□□ 0.79
PMS1-213ENST00000441310 KCNQ3O43525 872 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 SLC20A2Q08357 652 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 TSHZ3Q63HK5 1081 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 RGS12O14924 1447 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 DTNBO60941 627 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 ZBTB9Q96C00 473 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 ANO2Q9NQ90 1003 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 NPHP1O15259 732 aa19.97■□□□□ 0.79
PMS1-213ENST00000441310 ZNF397Q8NF99 534 aaPredicted RBP19.97■□□□□ 0.79
PMS1-213ENST00000441310 AXIN2Q9Y2T1 843 aa19.96■□□□□ 0.79
PMS1-213ENST00000441310 TULP2O00295 520 aa19.96■□□□□ 0.79
PMS1-213ENST00000441310 ANXA1P04083 346 aa19.96■□□□□ 0.79
PMS1-213ENST00000441310 MCCP23508 829 aa19.96■□□□□ 0.79
PMS1-213ENST00000441310 CEP85Q6P2H3 762 aa19.96■□□□□ 0.79
PMS1-213ENST00000441310 ZNF530Q6P9A1 599 aaPredicted RBP19.96■□□□□ 0.79
PMS1-213ENST00000441310 CHMP3Q9Y3E7 222 aa19.96■□□□□ 0.79
PMS1-213ENST00000441310 FLIIQ13045 1269 aa19.95■□□□□ 0.78
PMS1-213ENST00000441310 PTPRCP08575 1304 aa19.95■□□□□ 0.78
PMS1-213ENST00000441310 IRX3P78415 501 aaPredicted RBP19.95■□□□□ 0.78
PMS1-213ENST00000441310 KCNH5Q8NCM2 988 aa19.95■□□□□ 0.78
PMS1-213ENST00000441310 PAXBP1Q9Y5B6 917 aa19.95■□□□□ 0.78
PMS1-213ENST00000441310 TMEM87AQ8NBN3 555 aa19.95■□□□□ 0.78
PMS1-213ENST00000441310 CABLES1Q8TDN4 633 aa19.95■□□□□ 0.78
PMS1-213ENST00000441310 LARP6Q9BRS8 491 aaKnown RBP19.95■□□□□ 0.78
PMS1-213ENST00000441310 ZNF215Q9UL58 517 aaPredicted RBP19.95■□□□□ 0.78
PMS1-213ENST00000441310 LUZP1Q86V48 1076 aa19.94■□□□□ 0.78
PMS1-213ENST00000441310 ANKRD44Q8N8A2 993 aa19.94■□□□□ 0.78
PMS1-213ENST00000441310 PHAXQ9H814 394 aaKnown RBP19.94■□□□□ 0.78
PMS1-213ENST00000441310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.93■□□□□ 0.78
PMS1-213ENST00000441310 HDGFL1Q5TGJ6 251 aa19.93■□□□□ 0.78
PMS1-213ENST00000441310 CCDC30Q5VVM6 783 aa19.93■□□□□ 0.78
PMS1-213ENST00000441310 FBXO38Q6PIJ6 1188 aa19.93■□□□□ 0.78
PMS1-213ENST00000441310 ZFP91Q96JP5 570 aaPredicted RBP19.93■□□□□ 0.78
PMS1-213ENST00000441310 HNRNPH2P55795 449 aaKnown RBP19.93■□□□□ 0.78
PMS1-213ENST00000441310 CCDC192P0DO97 292 aa19.93■□□□□ 0.78
PMS1-213ENST00000441310 RBM6P78332 1123 aaKnown RBP19.93■□□□□ 0.78
PMS1-213ENST00000441310 ELF2Q15723 593 aa19.93■□□□□ 0.78
PMS1-213ENST00000441310 CEP135Q66GS9 1140 aa19.93■□□□□ 0.78
PMS1-213ENST00000441310 ANKRD24Q8TF21 1146 aa19.93■□□□□ 0.78
PMS1-213ENST00000441310 RTL1A6NKG5 1358 aa19.92■□□□□ 0.78
PMS1-213ENST00000441310 RPAP1Q9BWH6 1393 aaPredicted RBP19.92■□□□□ 0.78
PMS1-213ENST00000441310 NWD1Q149M9 1564 aa19.92■□□□□ 0.78
PMS1-213ENST00000441310 HTATSF1O43719 755 aaKnown RBP19.92■□□□□ 0.78
PMS1-213ENST00000441310 ZSCAN22P10073 491 aaPredicted RBP19.92■□□□□ 0.78
PMS1-213ENST00000441310 ARHGEF25Q86VW2 580 aa19.92■□□□□ 0.78
PMS1-213ENST00000441310 ADAMTSL3P82987 1691 aa19.92■□□□□ 0.78
PMS1-213ENST00000441310 TEFQ10587 303 aa19.91■□□□□ 0.78
PMS1-213ENST00000441310 ZSCAN25Q6NSZ9 544 aa19.91■□□□□ 0.78
PMS1-213ENST00000441310 CAMK4Q16566 473 aa19.91■□□□□ 0.78
PMS1-213ENST00000441310 NOL10Q9BSC4 688 aaKnown RBP19.91■□□□□ 0.78
PMS1-213ENST00000441310 ESYT1Q9BSJ8 1104 aa19.91■□□□□ 0.78
PMS1-213ENST00000441310 TRIM5Q9C035 493 aa19.91■□□□□ 0.78
PMS1-213ENST00000441310 C19orf44Q9H6X5 657 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms