RNA–Protein interactions for RNA: ENST00000441198.4

PTCRA-202, Transcript of pre T cell antigen receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PTCRA, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-202ENST00000441198 PRPF40BQ6NWY9 871 aaKnown RBP25.22■■□□□ 1.63
PTCRA-202ENST00000441198 DZIP3Q86Y13 1208 aaKnown RBP25.22■■□□□ 1.63
PTCRA-202ENST00000441198 PHACTR3Q96KR7 559 aa25.22■■□□□ 1.63
PTCRA-202ENST00000441198 NPHP1O15259 732 aa25.21■■□□□ 1.63
PTCRA-202ENST00000441198 DDNO94850 711 aaPredicted RBP25.21■■□□□ 1.63
PTCRA-202ENST00000441198 POTEIP0CG38 1075 aa25.21■■□□□ 1.63
PTCRA-202ENST00000441198 POTEJP0CG39 1038 aa25.21■■□□□ 1.63
PTCRA-202ENST00000441198 PIP4K2AP48426 406 aaPredicted RBP25.21■■□□□ 1.63
PTCRA-202ENST00000441198 ST5P78524 1137 aa25.21■■□□□ 1.63
PTCRA-202ENST00000441198 STYK1Q6J9G0 422 aa25.21■■□□□ 1.63
PTCRA-202ENST00000441198 NPM2Q86SE8 214 aaKnown RBP25.21■■□□□ 1.63
PTCRA-202ENST00000441198 CNKSR1Q969H4 720 aa25.21■■□□□ 1.63
PTCRA-202ENST00000441198 BTBD11A6QL63 1104 aa25.2■■□□□ 1.62
PTCRA-202ENST00000441198 USP16Q9Y5T5 823 aa25.2■■□□□ 1.62
PTCRA-202ENST00000441198 CHADLQ6NUI6 762 aa25.19■■□□□ 1.62
PTCRA-202ENST00000441198 MASTLQ96GX5 879 aa25.19■■□□□ 1.62
PTCRA-202ENST00000441198 PRAMEF22A3QJZ6 481 aa25.18■■□□□ 1.62
PTCRA-202ENST00000441198 PRKAR2BP31323 418 aa25.18■■□□□ 1.62
PTCRA-202ENST00000441198 RSPH6AQ9H0K4 717 aa25.17■■□□□ 1.62
PTCRA-202ENST00000441198 SOGA3Q5TF21 947 aa25.15■■□□□ 1.62
PTCRA-202ENST00000441198 C7orf43Q8WVR3 580 aa25.15■■□□□ 1.62
PTCRA-202ENST00000441198 CREBZFQ9NS37 354 aa25.15■■□□□ 1.62
PTCRA-202ENST00000441198 NBPF5PQ86XG9 351 aaPredicted RBP25.14■■□□□ 1.62
PTCRA-202ENST00000441198 MKRN1Q9UHC7 482 aaKnown RBP25.14■■□□□ 1.62
PTCRA-202ENST00000441198 CLEC4GQ6UXB4 293 aa25.13■■□□□ 1.61
PTCRA-202ENST00000441198 SCN4AP35499 1836 aa25.12■■□□□ 1.61
PTCRA-202ENST00000441198 MCM10Q7L590 875 aa25.12■■□□□ 1.61
PTCRA-202ENST00000441198 CCDC93Q567U6 631 aa25.11■■□□□ 1.61
PTCRA-202ENST00000441198 SNRPA1P09661 255 aaKnown RBP25.1■■□□□ 1.61
PTCRA-202ENST00000441198 NPR1P16066 1061 aa25.1■■□□□ 1.61
PTCRA-202ENST00000441198 OLFM4Q6UX06 510 aa25.1■■□□□ 1.61
PTCRA-202ENST00000441198 L3MBTL3Q96JM7 780 aaPredicted RBP25.1■■□□□ 1.61
PTCRA-202ENST00000441198 CFAP53Q96M91 514 aa25.1■■□□□ 1.61
PTCRA-202ENST00000441198 ZNF652Q9Y2D9 606 aa25.1■■□□□ 1.61
PTCRA-202ENST00000441198 KLRG2A4D1S0 409 aaPredicted RBP25.09■■□□□ 1.61
PTCRA-202ENST00000441198 IQCA1LA6NCM1 817 aa25.09■■□□□ 1.61
PTCRA-202ENST00000441198 NBPF26B4DH59 902 aa25.09■■□□□ 1.61
PTCRA-202ENST00000441198 NBPF10Q6P3W6 841 aaKnown RBP25.09■■□□□ 1.61
PTCRA-202ENST00000441198 NBPF15Q8N660 670 aa25.09■■□□□ 1.61
PTCRA-202ENST00000441198 TAF1DQ9H5J8 278 aaPredicted RBP25.09■■□□□ 1.61
PTCRA-202ENST00000441198 PASKQ96RG2 1323 aa25.09■■□□□ 1.61
PTCRA-202ENST00000441198 ZNF541Q9H0D2 1346 aa25.09■■□□□ 1.61
PTCRA-202ENST00000441198 FKBP4Q02790 459 aaKnown RBP eCLIP25.08■■□□□ 1.61
PTCRA-202ENST00000441198 DCTN1Q14203 1278 aa25.08■■□□□ 1.61
PTCRA-202ENST00000441198 LDHDQ86WU2 507 aa25.08■■□□□ 1.61
PTCRA-202ENST00000441198 RTF1Q92541 710 aaKnown RBP25.08■■□□□ 1.61
PTCRA-202ENST00000441198 ZNF277Q9NRM2 450 aaPredicted RBP25.08■■□□□ 1.61
PTCRA-202ENST00000441198 NIP7Q9Y221 180 aaKnown RBP eCLIP25.08■■□□□ 1.61
PTCRA-202ENST00000441198 CNTNAP1P78357 1384 aa25.06■■□□□ 1.6
PTCRA-202ENST00000441198 FAM177BA6PVY3 158 aa25.06■■□□□ 1.6
PTCRA-202ENST00000441198 U2AF1L5P0DN76 240 aaPredicted RBP25.06■■□□□ 1.6
PTCRA-202ENST00000441198 U2AF1Q01081 240 aaKnown RBP eCLIP25.06■■□□□ 1.6
PTCRA-202ENST00000441198 TPTE2Q6XPS3 522 aa25.06■■□□□ 1.6
PTCRA-202ENST00000441198 NUDCQ9Y266 331 aa25.06■■□□□ 1.6
PTCRA-202ENST00000441198 LAMB4A4D0S4 1761 aa25.04■■□□□ 1.6
PTCRA-202ENST00000441198 ADAMTSL1Q8N6G6 1762 aa25.04■■□□□ 1.6
PTCRA-202ENST00000441198 HLFQ16534 295 aa25.04■■□□□ 1.6
PTCRA-202ENST00000441198 RGL2O15211 777 aa25.03■■□□□ 1.6
PTCRA-202ENST00000441198 FOXN1O15353 648 aa25.03■■□□□ 1.6
PTCRA-202ENST00000441198 EAPPQ56P03 285 aaPredicted RBP25.03■■□□□ 1.6
PTCRA-202ENST00000441198 ITGBL1O95965 494 aaPredicted RBP25.02■■□□□ 1.6
PTCRA-202ENST00000441198 PPP2R1AP30153 589 aa25.01■■□□□ 1.59
PTCRA-202ENST00000441198 RTKN2Q8IZC4 609 aa25.01■■□□□ 1.59
PTCRA-202ENST00000441198 HACL1Q9UJ83 578 aa25.01■■□□□ 1.59
PTCRA-202ENST00000441198 SNED1Q8TER0 1413 aa25■■□□□ 1.59
PTCRA-202ENST00000441198 TMEM88BA6NKF7 163 aa24.99■■□□□ 1.59
PTCRA-202ENST00000441198 HTATSF1O43719 755 aaKnown RBP24.99■■□□□ 1.59
PTCRA-202ENST00000441198 EPHX2P34913 555 aa24.99■■□□□ 1.59
PTCRA-202ENST00000441198 IARSP41252 1262 aaKnown RBP24.99■■□□□ 1.59
PTCRA-202ENST00000441198 VEGFBP49765 207 aa24.99■■□□□ 1.59
PTCRA-202ENST00000441198 RNF123Q5XPI4 1314 aa24.99■■□□□ 1.59
PTCRA-202ENST00000441198 SYNE4Q8N205 404 aa24.99■■□□□ 1.59
PTCRA-202ENST00000441198 ABCC12Q96J65 1359 aa24.99■■□□□ 1.59
PTCRA-202ENST00000441198 MIS18AQ9NYP9 233 aa24.99■■□□□ 1.59
PTCRA-202ENST00000441198 FZD9O00144 591 aa24.98■■□□□ 1.59
PTCRA-202ENST00000441198 ALDH1B1P30837 517 aa24.98■■□□□ 1.59
PTCRA-202ENST00000441198 TAF7Q15545 349 aaPredicted RBP24.98■■□□□ 1.59
PTCRA-202ENST00000441198 CLEC11AQ9Y240 323 aa24.98■■□□□ 1.59
PTCRA-202ENST00000441198 NUP98P52948 1817 aa24.98■■□□□ 1.59
PTCRA-202ENST00000441198 GTF2E1P29083 439 aaPredicted RBP24.97■■□□□ 1.59
PTCRA-202ENST00000441198 DLG5Q8TDM6 1919 aa24.96■■□□□ 1.59
PTCRA-202ENST00000441198 KDM3BQ7LBC6 1761 aa24.96■■□□□ 1.59
PTCRA-202ENST00000441198 CRY2Q49AN0 593 aa24.96■■□□□ 1.59
PTCRA-202ENST00000441198 NUTM1Q86Y26 1132 aa24.96■■□□□ 1.59
PTCRA-202ENST00000441198 NGEFQ8N5V2 710 aa24.96■■□□□ 1.59
PTCRA-202ENST00000441198 COL4A5P29400 1685 aa24.96■■□□□ 1.59
PTCRA-202ENST00000441198 MAP1SQ66K74 1059 aaPredicted RBP24.95■■□□□ 1.58
PTCRA-202ENST00000441198 PNMA8AQ86V59 439 aaPredicted RBP24.94■■□□□ 1.58
PTCRA-202ENST00000441198 GPC2Q8N158 579 aa24.94■■□□□ 1.58
PTCRA-202ENST00000441198 PSMD1Q99460 953 aa24.94■■□□□ 1.58
PTCRA-202ENST00000441198 PRDM10Q9NQV6 1147 aa24.94■■□□□ 1.58
PTCRA-202ENST00000441198 CNTROBQ8N137 903 aa24.93■■□□□ 1.58
PTCRA-202ENST00000441198 NYXQ9GZU5 481 aa24.93■■□□□ 1.58
PTCRA-202ENST00000441198 LTBP1Q14766 1721 aa24.92■■□□□ 1.58
PTCRA-202ENST00000441198 AIDAQ96BJ3 306 aa24.92■■□□□ 1.58
PTCRA-202ENST00000441198 MAP3K15Q6ZN16 1313 aa24.91■■□□□ 1.58
PTCRA-202ENST00000441198 ERVV-1B6SEH8 477 aa24.91■■□□□ 1.58
PTCRA-202ENST00000441198 CTCFP49711 727 aaPredicted RBP24.91■■□□□ 1.58
PTCRA-202ENST00000441198 TTLL7Q6ZT98 887 aa24.91■■□□□ 1.58
PTCRA-202ENST00000441198 SLC51AQ86UW1 340 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms