RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 GOLGB1Q14789 3259 aaKnown RBP7.27□□□□□ -1.25
PTPN4-206ENST00000441089 MOXD2PA6NHM9 499 aa7.27□□□□□ -1.25
PTPN4-206ENST00000441089 VARSP26640 1264 aaKnown RBP7.27□□□□□ -1.25
PTPN4-206ENST00000441089 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
PTPN4-206ENST00000441089 NUTM1Q86Y26 1132 aa7.27□□□□□ -1.25
PTPN4-206ENST00000441089 SPIRE2Q8WWL2 714 aa7.27□□□□□ -1.25
PTPN4-206ENST00000441089 RRP7BPQ9NSQ0 103 aa7.27□□□□□ -1.25
PTPN4-206ENST00000441089 ADGRL2O95490 1459 aa7.27□□□□□ -1.25
PTPN4-206ENST00000441089 PXDNQ92626 1479 aa7.27□□□□□ -1.25
PTPN4-206ENST00000441089 NRXN3Q9Y4C0 1643 aa7.27□□□□□ -1.25
PTPN4-206ENST00000441089 SCARF1Q14162 830 aa7.26□□□□□ -1.25
PTPN4-206ENST00000441089 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
PTPN4-206ENST00000441089 IQGAP3Q86VI3 1631 aa7.26□□□□□ -1.25
PTPN4-206ENST00000441089 MINK1Q8N4C8 1332 aaPredicted RBP7.26□□□□□ -1.25
PTPN4-206ENST00000441089 ZIC2O95409 532 aaPredicted RBP7.25□□□□□ -1.25
PTPN4-206ENST00000441089 APBA3O96018 575 aa7.25□□□□□ -1.25
PTPN4-206ENST00000441089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.25□□□□□ -1.25
PTPN4-206ENST00000441089 DNMT3LQ9UJW3 386 aa7.25□□□□□ -1.25
PTPN4-206ENST00000441089 CLCN1P35523 988 aa7.24□□□□□ -1.25
PTPN4-206ENST00000441089 GRM5P41594 1212 aa7.24□□□□□ -1.25
PTPN4-206ENST00000441089 ESCO1Q5FWF5 840 aa7.24□□□□□ -1.25
PTPN4-206ENST00000441089 FAM196AQ6ZSG2 479 aa7.24□□□□□ -1.25
PTPN4-206ENST00000441089 CDK15Q96Q40 435 aa7.24□□□□□ -1.25
PTPN4-206ENST00000441089 MAP10Q9P2G4 905 aa7.24□□□□□ -1.25
PTPN4-206ENST00000441089 NRKQ7Z2Y5 1582 aa7.24□□□□□ -1.25
PTPN4-206ENST00000441089 METP08581 1390 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 NEXMIFQ5QGS0 1516 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 PLEKHG3A1L390 1219 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 FAM83GA6ND36 823 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 FOXO3O43524 673 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 MAN1A2O60476 641 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 TRIM37O94972 964 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 RASSF7Q02833 373 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 SPATA31A3Q5VYP0 1347 aa7.23□□□□□ -1.25
PTPN4-206ENST00000441089 ANKRD30AQ9BXX3 1397 aa7.22□□□□□ -1.25
PTPN4-206ENST00000441089 NRAPQ86VF7 1730 aa7.22□□□□□ -1.25
PTPN4-206ENST00000441089 XPCQ01831 940 aaPredicted RBP7.22□□□□□ -1.25
PTPN4-206ENST00000441089 ARID5BQ14865 1188 aa7.22□□□□□ -1.25
PTPN4-206ENST00000441089 FAM182BQ5T319 152 aa7.22□□□□□ -1.25
PTPN4-206ENST00000441089 MYOM1P52179 1685 aa7.22□□□□□ -1.25
PTPN4-206ENST00000441089 THSD7AQ9UPZ6 1657 aa7.22□□□□□ -1.25
PTPN4-206ENST00000441089 DLC1Q96QB1 1528 aa7.22□□□□□ -1.25
PTPN4-206ENST00000441089 CDC42BPGQ6DT37 1551 aa7.21□□□□□ -1.25
PTPN4-206ENST00000441089 CASZ1Q86V15 1759 aa7.21□□□□□ -1.25
PTPN4-206ENST00000441089 CCDC144AA2RUR9 1427 aa7.21□□□□□ -1.25
PTPN4-206ENST00000441089 CFAP99D6REC4 459 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 GDF11O95390 407 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 HSPA6P17066 643 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 CNTNAP3BQ96NU0 1288 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 SYT17Q9BSW7 474 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 CNTNAP3Q9BZ76 1288 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 ADAMTS8Q9UP79 889 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 KIF1AQ12756 1690 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 ABCA3Q99758 1704 aa7.21□□□□□ -1.26
PTPN4-206ENST00000441089 HFM1A2PYH4 1435 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 ABCC5O15440 1437 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 PCNTO95613 3336 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 F12P00748 615 aaPredicted RBP7.2□□□□□ -1.26
PTPN4-206ENST00000441089 SSTR3P32745 418 aaPredicted RBP7.2□□□□□ -1.26
PTPN4-206ENST00000441089 RNFT1Q5M7Z0 435 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 LINC00528Q8N1L1 170 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 TMEM151AQ8N4L1 468 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 MEIOBQ8N635 442 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 WHAMMQ8TF30 809 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 PCDHB15Q9Y5E8 787 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 RGPD3A6NKT7 1758 aaPredicted RBP7.2□□□□□ -1.26
PTPN4-206ENST00000441089 RGPD4Q7Z3J3 1758 aa7.2□□□□□ -1.26
PTPN4-206ENST00000441089 PRAG1Q86YV5 1406 aa7.19□□□□□ -1.26
PTPN4-206ENST00000441089 E9PCH4 1651 aa7.19□□□□□ -1.26
PTPN4-206ENST00000441089 COL14A1Q05707 1796 aaKnown RBP7.19□□□□□ -1.26
PTPN4-206ENST00000441089 BMP2P12643 396 aa7.19□□□□□ -1.26
PTPN4-206ENST00000441089 CTHP32929 405 aa7.19□□□□□ -1.26
PTPN4-206ENST00000441089 MTMR2Q13614 643 aa7.19□□□□□ -1.26
PTPN4-206ENST00000441089 FAM174AQ8TBP5 190 aa7.19□□□□□ -1.26
PTPN4-206ENST00000441089 FHDC1Q9C0D6 1143 aaPredicted RBP7.19□□□□□ -1.26
PTPN4-206ENST00000441089 SPATA31A5Q5VU36 1347 aa7.19□□□□□ -1.26
PTPN4-206ENST00000441089 SPATA31A7Q8IWB4 1347 aa7.19□□□□□ -1.26
PTPN4-206ENST00000441089 TNS3Q68CZ2 1445 aa7.18□□□□□ -1.26
PTPN4-206ENST00000441089 SHANK3Q9BYB0 1731 aa7.18□□□□□ -1.26
PTPN4-206ENST00000441089 PRELPP51888 382 aa7.18□□□□□ -1.26
PTPN4-206ENST00000441089 ZNF385CQ66K41 422 aaPredicted RBP7.18□□□□□ -1.26
PTPN4-206ENST00000441089 DESI1Q6ICB0 168 aa7.18□□□□□ -1.26
PTPN4-206ENST00000441089 LYPD8Q6UX82 237 aa7.18□□□□□ -1.26
PTPN4-206ENST00000441089 BTG4Q9NY30 223 aa7.18□□□□□ -1.26
PTPN4-206ENST00000441089 ROBO2Q9HCK4 1378 aa7.18□□□□□ -1.26
PTPN4-206ENST00000441089 DAPK1P53355 1430 aa7.18□□□□□ -1.26
PTPN4-206ENST00000441089 PER1O15534 1290 aaPredicted RBP7.17□□□□□ -1.26
PTPN4-206ENST00000441089 PSME1Q06323 249 aa7.17□□□□□ -1.26
PTPN4-206ENST00000441089 TRIM26Q12899 539 aaPredicted RBP7.17□□□□□ -1.26
PTPN4-206ENST00000441089 GPR162Q16538 588 aa7.17□□□□□ -1.26
PTPN4-206ENST00000441089 ZNF326Q5BKZ1 582 aaKnown RBP7.17□□□□□ -1.26
PTPN4-206ENST00000441089 KRT28Q7Z3Y7 464 aa7.17□□□□□ -1.26
PTPN4-206ENST00000441089 ARHGEF10O15013 1369 aa7.17□□□□□ -1.26
PTPN4-206ENST00000441089 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
PTPN4-206ENST00000441089 CABLES1Q8TDN4 633 aa7.16□□□□□ -1.26
PTPN4-206ENST00000441089 COL25A1Q9BXS0 654 aaPredicted RBP7.16□□□□□ -1.26
PTPN4-206ENST00000441089 MAP3K5Q99683 1374 aa7.16□□□□□ -1.26
PTPN4-206ENST00000441089 ZBTB7AO95365 584 aa7.15□□□□□ -1.26
PTPN4-206ENST00000441089 PTSQ03393 145 aa7.15□□□□□ -1.26
PTPN4-206ENST00000441089 NR5A1Q13285 461 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms